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5O45
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BU of 5o45 by Molmil
Structure of human PD-L1 in complex with inhibitor
Descriptor: PHE-MEA-9KK-SAR-ASP-VAL-MEA-TYR-SAR-TRP-TYR-LEU-CCS-GLY-NH2, Programmed cell death 1 ligand 1
Authors:Magiera, K, Grudnik, P, Dubin, G, Holak, T.A.
Deposit date:2017-05-26
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Bioactive Macrocyclic Inhibitors of the PD-1/PD-L1 Immune Checkpoint.
Angew. Chem. Int. Ed. Engl., 56, 2017
8GY5
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BU of 8gy5 by Molmil
High-resolution structure of the cemiplimab Fab in complex with PD-1
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.-S, Jeong, T.J.
Deposit date:2022-09-21
Release date:2023-10-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:High-resolution structure of the cemiplimab Fab in complex with PD-1
To Be Published
8HIT
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BU of 8hit by Molmil
Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, JS007-VH, JS007-VL
Authors:Tan, S, Shi, Y, Wang, Q, Gao, G.F, Guan, J, Chai, Y, Qi, J.
Deposit date:2022-11-21
Release date:2023-02-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterization of the high-affinity anti-CTLA-4 monoclonal antibody JS007 for immune checkpoint therapy of cancer.
Mabs, 15, 2023
8HXS
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BU of 8hxs by Molmil
Small_spotted catshark CD8alpha
Descriptor: T-cell surface glycoprotein CD8 alpha chain
Authors:Wang, J, Zou, J.
Deposit date:2023-01-05
Release date:2023-02-22
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The first crystal structure of CD8 alpha alpha from a cartilaginous fish.
Front Immunol, 14, 2023
8IIA
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BU of 8iia by Molmil
Crystal structure of the oligomeric state of the extracellular domain of human myelin protein zero(MPZ/P0)
Descriptor: GLYCEROL, Myelin protein P0
Authors:Sakakura, M, Tanabe, M, Mio, K.
Deposit date:2023-02-24
Release date:2023-08-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural bases for the Charcot-Marie-Tooth disease induced by single amino acid substitutions of myelin protein zero.
Structure, 31, 2023
8JBA
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BU of 8jba by Molmil
Discovery and Crystallography Study of Novel Oxadiazole Analogs as Small Molecule PD-1/PD-L1 inhibitors
Descriptor: (2~{S})-2-[[3-[[5-[(2-methyl-3-phenyl-phenoxy)methyl]-1,3,4-oxadiazol-2-yl]sulfanylmethyl]phenyl]methylamino]-3-oxidanyl-propanoic acid, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Xiao, Y.B.
Deposit date:2023-05-08
Release date:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery and Crystallography Study of Novel Biphenyl Ether and Oxadiazole Thioether (Non-Arylmethylamine)-Based Small-Molecule PD-1/PD-L1 Inhibitors as Immunotherapeutic Agents.
J.Med.Chem., 66, 2023
8JEL
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BU of 8jel by Molmil
Crystal structure of TIGIT in complexed with Ociperlimab, crystal form I
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEO
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BU of 8jeo by Molmil
Crystal structure of TIGIT in complexed with Tiragolumab
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8JEN
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BU of 8jen by Molmil
Crystal structure of TIGIT in complexed with Ociperlimab, crystal form II
Descriptor: T-cell immunoreceptor with Ig and ITIM domains, antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 2024
8K5N
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BU of 8k5n by Molmil
Discovery of Novel PD-L1 Inhibitors That Induce Dimerization and Degradation of PD-L1 Based on Fragment Coupling Strategy
Descriptor: 3-[(1~{S})-1-[6-methoxy-3-methyl-5-[[[(2~{S})-5-oxidanylidenepyrrolidin-2-yl]methylamino]methyl]pyridin-2-yl]oxy-2,3-dihydro-1~{H}-inden-4-yl]-2-methyl-~{N}-[5-[[[(2~{S})-5-oxidanylidenepyrrolidin-2-yl]methylamino]methyl]pyridin-2-yl]benzamide, Programmed cell death 1 ligand 1
Authors:Cheng, Y, Xiao, Y.B.
Deposit date:2023-07-22
Release date:2024-01-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of Novel PD-L1 Inhibitors That Induce the Dimerization, Internalization, and Degradation of PD-L1 Based on the Fragment Coupling Strategy.
J.Med.Chem., 66, 2023
8OR1
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BU of 8or1 by Molmil
Co-crystal strucutre of PD-L1 with low molecular weight inhibitor
Descriptor: 5-[[5-[[2-chloranyl-3-(2-fluorophenyl)phenyl]methoxy]-2-[(~{E})-2-hydroxyethyliminomethyl]phenoxy]methyl]pyridine-3-carbonitrile, Programmed cell death 1 ligand 1
Authors:Zhang, H, Zhou, S, Wu, C, Zhu, M, Yu, Q, Wang, X, Awadasseid, A, Plewka, J, Magiera-Mularz, K, Wu, Y, Zhang, W.
Deposit date:2023-04-12
Release date:2023-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Design, Synthesis, and Antitumor Activity Evaluation of 2-Arylmethoxy-4-(2,2'-dihalogen-substituted biphenyl-3-ylmethoxy) Benzylamine Derivatives as Potent PD-1/PD-L1 Inhibitors.
J.Med.Chem., 66, 2023
8P1O
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BU of 8p1o by Molmil
Solubilizer tag effect on PD-L1/inhibitor binding properties for m-terphenyl derivatives
Descriptor: (3~{R})-1-[[4-[2-chloranyl-3-(2,3-dihydro-1,4-benzodioxin-6-yl)phenyl]-2-methoxy-phenyl]methyl]-~{N}-(2-hydroxyethyl)pyrrolidine-3-carboxamide, CHLORIDE ION, Programmed cell death 1 ligand 1, ...
Authors:Plewka, J, Magiera-Mularz, K, Surmiak, E, Kalinowska-Tluscik, J, Holak, T.A.
Deposit date:2023-05-12
Release date:2024-01-31
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Solubilizer Tag Effect on PD-L1/Inhibitor Binding Properties for m -Terphenyl Derivatives.
Acs Med.Chem.Lett., 15, 2024
3NOI
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BU of 3noi by Molmil
Crystal Structure of Natural Killer Cell Cytotoxicity Receptor NKp30 (NCR3)
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, CALCIUM ION, Natural cytotoxicity triggering receptor 3
Authors:Joyce, M.G, Sun, P.D.
Deposit date:2010-06-25
Release date:2011-03-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Structure of the Natural Killer cell activating receptor NKp30 and dissection of ligand binding site
Proc.Natl.Acad.Sci.USA, 2011
3OSK
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BU of 3osk by Molmil
Crystal structure of human CTLA-4 apo homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cytotoxic T-lymphocyte protein 4, GLYCEROL
Authors:Yu, C, Sonnen, A.F.-P, Ikemizu, S, Stuart, D.I, Gilbert, R.J.C, Davis, S.J.
Deposit date:2010-09-09
Release date:2010-12-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rigid-body ligand recognition drives cytotoxic T-lymphocyte antigen 4 (CTLA-4) receptor triggering
J.Biol.Chem., 286, 2011
3Q0H
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BU of 3q0h by Molmil
Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT)
Descriptor: T cell immunoreceptor with Ig and ITIM domains
Authors:Ramagopal, U.A, Guo, H, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2010-12-15
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT)
To be published
3R0N
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BU of 3r0n by Molmil
Crystal Structure of the Immunoglobulin variable domain of Nectin-2
Descriptor: CHLORIDE ION, MAGNESIUM ION, Poliovirus receptor-related protein 2
Authors:Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-03-08
Release date:2011-04-27
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of Nectin-2 reveals determinants of homophilic and heterophilic interactions that control cell-cell adhesion.
Proc.Natl.Acad.Sci.USA, 109, 2012
3RBG
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BU of 3rbg by Molmil
Crystal structure analysis of Class-I MHC restricted T-cell associated molecule
Descriptor: Cytotoxic and regulatory T-cell molecule, PHOSPHATE ION
Authors:Rubinstein, R, Ramagopal, U.A, Toro, R, Nathenson, S.G, Fiser, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-03-29
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Functional classification of immune regulatory proteins.
Structure, 21, 2013
3RNK
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BU of 3rnk by Molmil
Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
Descriptor: Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Cao, E, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-22
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of the complex between mouse PD-1 mutant and PD-L2 IgV domain
To be Published
3RQ3
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BU of 3rq3 by Molmil
Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
Descriptor: CHLORIDE ION, T cell immunoreceptor with Ig and ITIM domains
Authors:Ramagopal, U.A, Rubinstein, R, Guo, H, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
Deposit date:2011-04-27
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of T-cell immunoreceptor with immunoglobulin and ITIM domains (TIGIT) in hexagonal crystal form
To be published
3RRQ
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BU of 3rrq by Molmil
Crystal structure of the extracellular domain of human PD-1
Descriptor: Programmed cell death protein 1
Authors:Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
Deposit date:2011-04-29
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the extracellular domain of human PD-1
To be Published
3UDW
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BU of 3udw by Molmil
Crystal structure of the immunoreceptor TIGIT in complex with Poliovirus receptor (PVR/CD155/necl-5) D1 domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Poliovirus receptor, T cell immunoreceptor with Ig and ITIM domains
Authors:Rouge, L, Stengel, K.F, Yin, J.P, Bazan, F.J, Wiesmann, C.
Deposit date:2011-10-28
Release date:2012-03-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Structure of TIGIT immunoreceptor bound to poliovirus receptor reveals a cell-cell adhesion and signaling mechanism that requires cis-trans receptor clustering.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UCR
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BU of 3ucr by Molmil
Crystal structure of the immunoreceptor TIGIT IgV domain
Descriptor: CHLORIDE ION, T cell immunoreceptor with Ig and ITIM domains
Authors:Yin, J.P, Stengel, K.F, Rouge, L, Bazan, J.F, Wiesmann, C.
Deposit date:2011-10-27
Release date:2012-03-14
Last modified:2012-04-25
Method:X-RAY DIFFRACTION (2.627 Å)
Cite:Structure of TIGIT immunoreceptor bound to poliovirus receptor reveals a cell-cell adhesion and signaling mechanism that requires cis-trans receptor clustering.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UPC
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BU of 3upc by Molmil
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, TETRAETHYLENE GLYCOL, ...
Authors:Dudgeon, K, Rouet, R, Kokmeijer, I, Langley, D.B, Christ, D.
Deposit date:2011-11-17
Release date:2012-06-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:General strategy for the generation of human antibody variable domains with increased aggregation resistance
Proc.Natl.Acad.Sci.USA, 109, 2012
3UPA
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BU of 3upa by Molmil
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
Descriptor: kappa light chain variable domain
Authors:Dudgeon, K, Rouet, R, Kokmeijer, I, Langley, D.B, Christ, D.
Deposit date:2011-11-17
Release date:2012-06-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:General strategy for the generation of human antibody variable domains with increased aggregation resistance
Proc.Natl.Acad.Sci.USA, 109, 2012
3WV0
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BU of 3wv0 by Molmil
O-glycan attached to herpes simplex virus type 1 glycoprotein gB is recognized by the Ig V-set domain of human paired immunoglobulin-like type 2 receptor alpha
Descriptor: Envelope glycoprotein B, N-acetyl-alpha-neuraminic acid-(2-6)-2-acetamido-2-deoxy-alpha-D-galactopyranose, Paired immunoglobulin-like type 2 receptor alpha, ...
Authors:Kuroki, K, Wang, J, Ose, T, Yamaguchi, M, Tabata, S, Maita, N, Nakamura, S, Kajikawa, M, Kogure, A, Satoh, T, Arase, H, Maenaka, K.
Deposit date:2014-05-10
Release date:2014-06-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for simultaneous recognition of an O-glycan and its attached peptide of mucin family by immune receptor PILR alpha
Proc.Natl.Acad.Sci.USA, 111, 2014

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