Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MN3
DownloadVisualize
BU of 4mn3 by Molmil
Chromodomain antagonists that target the polycomb-group methyllysine reader protein Chromobox homolog 7 (CBX7)
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Chromobox protein homolog 7, ...
Authors:Chakravarthi, S, Daze, K, Douglas, S, Quon, T, Dev, A, Peng, F, Heller, M, Boulanger, M.J, Wulff, J, Hof, F.
Deposit date:2013-09-09
Release date:2014-04-02
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (1.542 Å)
Cite:Chromodomain Antagonists That Target the Polycomb-Group Methyllysine Reader Protein Chromobox Homolog 7 (CBX7).
J.Med.Chem., 57, 2014
4O42
DownloadVisualize
BU of 4o42 by Molmil
Tandem chromodomains of human CHD1 in complex with influenza NS1 C-terminal tail dimethylated at K229
Descriptor: Chromodomain-helicase-DNA-binding protein 1, GLYCEROL, Nonstructural protein 1, ...
Authors:Qin, S, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-18
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis for histone mimicry and hijacking of host proteins by influenza virus protein NS1.
Nat Commun, 5, 2014
2MJ8
DownloadVisualize
BU of 2mj8 by Molmil
Solution structure of CDYL2 chromodomain
Descriptor: Chromodomain Y-like protein 2
Authors:Qin, S, Houliston, S, Arrowsmith, C.H, Edwards, A.M, Wu, H, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2013-12-28
Release date:2014-04-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020
2M2L
DownloadVisualize
BU of 2m2l by Molmil
Solution structure of Entamoeba histolytica HP1 chromodomain
Descriptor: Putative uncharacterized protein
Authors:Wiggins, K.R, Ren, X, Ali, I.K.M, Petri, W.A, Khorasanizadeh, S.
Deposit date:2012-12-28
Release date:2014-05-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Characterization of putative readers of epigenetic methyl-marks from Entamoeba histolytica
To be Published
4QUF
DownloadVisualize
BU of 4quf by Molmil
crystal structure of chromodomain of Rhino with H3K9me3
Descriptor: H3(1-15)K9me3 peptide, RE36324p
Authors:Li, S, Patel, D.J.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Genes Dev., 28, 2014
4QUC
DownloadVisualize
BU of 4quc by Molmil
Crystal structure of chromodomain of Rhino
Descriptor: RE36324p
Authors:Li, S, Patel, D.J.
Deposit date:2014-07-10
Release date:2014-08-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing.
Genes Dev., 28, 2014
4X3K
DownloadVisualize
BU of 4x3k by Molmil
Crystal structure of chromobox homolog 7 (CBX7) chromodomain with H3K27me3 peptide
Descriptor: Chromobox protein homolog 7, H3K27me3 peptide, NICKEL (II) ION, ...
Authors:Ren, C, Zhou, M.M.
Deposit date:2014-12-01
Release date:2015-03-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Small-Molecule Modulators of Methyl-Lysine Binding for the CBX7 Chromodomain.
Chem.Biol., 22, 2015
4X3U
DownloadVisualize
BU of 4x3u by Molmil
Crystal structure of chromobox homolog 7 (CBX7) chromodomain with Suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Chromobox protein homolog 7
Authors:Ren, C, Zhou, M.M.
Deposit date:2014-12-01
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Small-Molecule Modulators of Methyl-Lysine Binding for the CBX7 Chromodomain.
Chem.Biol., 22, 2015
4X3S
DownloadVisualize
BU of 4x3s by Molmil
Crystal structure of chromobox homology 7 (CBX7) with SETDB1-1170me3 Peptide
Descriptor: CITRIC ACID, Chromobox protein homolog 7, FE (III) ION, ...
Authors:Ren, C, Plotnikov, A.N, Zhou, M.M.
Deposit date:2014-12-01
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Small-Molecule Modulators of Methyl-Lysine Binding for the CBX7 Chromodomain.
Chem.Biol., 22, 2015
4X3T
DownloadVisualize
BU of 4x3t by Molmil
Crystal structure of chromobox homolog 7 (CBX7) chromodomain with MS37452
Descriptor: 1,2-ETHANEDIOL, 1-[4-(2,3-dimethoxybenzoyl)piperazin-1-yl]-2-(3-methylphenoxy)ethanone, Chromobox protein homolog 7, ...
Authors:Ren, C, Jakoncic, J, Zhou, M.M.
Deposit date:2014-12-01
Release date:2015-03-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Small-Molecule Modulators of Methyl-Lysine Binding for the CBX7 Chromodomain.
Chem.Biol., 22, 2015
4O9I
DownloadVisualize
BU of 4o9i by Molmil
Structure of CHD4 double chromodomains depicts cooperative folding for DNA binding
Descriptor: Chromodomain-helicase-DNA-binding protein 4
Authors:Wiggs, K.R, Chruszcz, M, Su, X, Minor, W, Khorasanizadeh, S.
Deposit date:2014-01-02
Release date:2015-07-08
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of CHD4 double chromodomains depicts cooperative folding for DNA binding
TO BE PUBLISHED
4U68
DownloadVisualize
BU of 4u68 by Molmil
Crystal structure of Rhino chromodomain in complex with H3K9me3
Descriptor: H3K9me3, Rhino
Authors:Yu, B.W, Huang, Y.
Deposit date:2014-07-28
Release date:2015-08-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into Rhino-mediated germline piRNA cluster formation
Cell Res., 25, 2015
5E4X
DownloadVisualize
BU of 5e4x by Molmil
Crystal structure of cpSRP43 chromodomain 3
Descriptor: MAGNESIUM ION, Signal recognition particle 43 kDa protein, chloroplastic
Authors:Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
Deposit date:2015-10-07
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
5E4W
DownloadVisualize
BU of 5e4w by Molmil
Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail
Descriptor: CALCIUM ION, GLYCEROL, Inner membrane protein ALBINO3, ...
Authors:Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
Deposit date:2015-10-07
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
2N88
DownloadVisualize
BU of 2n88 by Molmil
Chromodomain 3 (CD3) of cpSRP43
Descriptor: Signal recognition particle 43 kDa protein, chloroplastic
Authors:Hennig, J, Sattler, M.
Deposit date:2015-10-06
Release date:2015-12-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
5EPJ
DownloadVisualize
BU of 5epj by Molmil
Crystal Structure of chromodomain of CBX7 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 7, UNKNOWN ATOM OR ION, peptide-like inhibitor UNC3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-16
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of chromodomain of CBX7 in complex with inhibitor UNC3866
to be published
5EQ0
DownloadVisualize
BU of 5eq0 by Molmil
Crystal Structure of chromodomain of CBX8 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 8, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-12
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5EPK
DownloadVisualize
BU of 5epk by Molmil
Crystal Structure of chromodomain of CBX2 in complex with inhibitor UNC3866
Descriptor: Chromobox protein homolog 2, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5EPL
DownloadVisualize
BU of 5epl by Molmil
Crystal Structure of chromodomain of CBX4 in complex with inhibitor UNC3866
Descriptor: E3 SUMO-protein ligase CBX4, UNKNOWN ATOM OR ION, unc3866
Authors:Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-11-11
Release date:2015-12-23
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5AFW
DownloadVisualize
BU of 5afw by Molmil
Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1, ...
Authors:Metzger, E, Willmann, D, McMillan, J, Petroll, K, Metzger, P, Gerhardt, S, vonMaessenhausen, A, Schott, A.K, Espejo, A, Eberlin, A, Wohlwend, D, Schuele, K.M, Schleicher, M, Perner, S, Bedford, M.T, Dengjel, J, Flaig, R, Einsle, O, Schuele, R.
Deposit date:2015-01-26
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Assembly of Methylated Kdm1A and Chd1 Drives Androgen Receptor-Dependent Transcription and Translocation.
Nat.Struct.Mol.Biol., 23, 2016
5EJW
DownloadVisualize
BU of 5ejw by Molmil
Crystal structure of chromobox homolog 7 (CBX7) chromodomain with MS351
Descriptor: (1~{R})-2-[2-azanylidene-3-[(2-methylphenyl)methyl]benzimidazol-1-yl]-1-(3,4-dichlorophenyl)ethanol, Chromobox protein homolog 7
Authors:Ren, C, Zhou, M.M.
Deposit date:2015-11-02
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-Guided Discovery of Selective Antagonists for the Chromodomain of Polycomb Repressive Protein CBX7.
Acs Med.Chem.Lett., 7, 2016
2RVM
DownloadVisualize
BU of 2rvm by Molmil
Solution structure of the chromodomain of HP1alpha with the phosphorylated N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVN
DownloadVisualize
BU of 2rvn by Molmil
Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed with H3K9me3 peptide
Descriptor: 18-mer peptide of Histone H3, Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
2RVL
DownloadVisualize
BU of 2rvl by Molmil
Solution structure of the chromodomain of HP1alpha with the N-terminal tail
Descriptor: Chromobox protein homolog 5
Authors:Kawaguchi, A, Nishimura, Y.
Deposit date:2015-12-18
Release date:2016-03-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Extended string-like binding of the phosphorylated HP1 alpha N-terminal tail to the lysine 9-methylated histone H3 tail
Sci Rep, 6, 2016
5JJZ
DownloadVisualize
BU of 5jjz by Molmil
Chromo domain of human Chromodomain Protein, Y-Like 2
Descriptor: Chromodomain Y-like protein 2, LYS-LYS-LYS-ALA-ARG-MLY-SER-ALA-GLY-ALA-ALA-LYS-TYR
Authors:DONG, A, DOMBROVSKI, L, LOPPNAU, P, TEMPEL, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, MIN, J, WU, H, Structural Genomics Consortium (SGC)
Deposit date:2016-04-25
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of CDYL2 domain of human CDYL2 protein
to be published

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon