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5IZO
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BU of 5izo by Molmil
Bacillus NanoRNase A (H103A) + 2 divalent cations + PO4 at the active site
Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA, MANGANESE (II) ION, PHOSPHATE ION
Authors:Schmier, B.J, Malhotra, A, Nelersa, C.M.
Deposit date:2016-03-25
Release date:2017-08-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA.
Sci Rep, 7, 2017
5IUF
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BU of 5iuf by Molmil
Bacillus NanoRNase A active site mutant bound to pAp
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Bifunctional oligoribonuclease and PAP phosphatase NrnA
Authors:Schmier, B.J, Nelersa, C.M, Malhotra, A.
Deposit date:2016-03-17
Release date:2017-08-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA.
Sci Rep, 7, 2017
5IPP
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BU of 5ipp by Molmil
Structure of Bacillus NanoRNase A active site mutant bound to a mononucleotide
Descriptor: ADENOSINE MONOPHOSPHATE, Bifunctional oligoribonuclease and PAP phosphatase NrnA
Authors:Schmier, B.J, Nelersa, C.M, Malhotra, A.
Deposit date:2016-03-09
Release date:2017-08-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA.
Sci Rep, 7, 2017
5GHT
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BU of 5ght by Molmil
DNA replication protein
Descriptor: SsDNA-specific exonuclease
Authors:Oyama, T.
Deposit date:2016-06-20
Release date:2016-10-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.795 Å)
Cite:Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication.
Nucleic Acids Res., 44, 2016
5GHS
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BU of 5ghs by Molmil
DNA replication protein
Descriptor: Putative uncharacterized protein, SULFATE ION, SsDNA-specific exonuclease
Authors:Oyama, T.
Deposit date:2016-06-20
Release date:2016-10-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication.
Nucleic Acids Res., 44, 2016
5GHR
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BU of 5ghr by Molmil
DNA replication protein
Descriptor: Putative uncharacterized protein, SULFATE ION, SsDNA-specific exonuclease
Authors:Oyama, T.
Deposit date:2016-06-20
Release date:2016-10-12
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.509 Å)
Cite:Atomic structure of an archaeal GAN suggests its dual roles as an exonuclease in DNA repair and a CMG component in DNA replication.
Nucleic Acids Res., 44, 2016
5F56
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BU of 5f56 by Molmil
Structure of RecJ complexed with DNA and SSB-ct
Descriptor: ALA-ASP-LEU-PRO-PHE, DNA (5'-D(*CP*TP*GP*AP*TP*GP*GP*CP*A)-3'), MANGANESE (II) ION, ...
Authors:Zhao, Y, Hua, Y, Cheng, K.
Deposit date:2015-12-04
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for DNA 5 -end resection by RecJ
Elife, 5, 2016
5F55
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BU of 5f55 by Molmil
Structure of RecJ complexed with DNA
Descriptor: DNA (5'-D(*GP*AP*TP*GP*TP*AP*CP*GP*CP*TP*AP*GP*GP*C)-3'), MANGANESE (II) ION, SULFATE ION, ...
Authors:Hua, Y, Zhao, Y, Cheng, K.
Deposit date:2015-12-04
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for DNA 5 -end resection by RecJ
Elife, 5, 2016
5F54
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BU of 5f54 by Molmil
Structure of RecJ complexed with dTMP
Descriptor: MANGANESE (II) ION, Single-stranded-DNA-specific exonuclease, THYMIDINE-5'-PHOSPHATE
Authors:Hua, Y, Zhao, Y, Cheng, K.
Deposit date:2015-12-04
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for DNA 5 -end resection by RecJ
Elife, 5, 2016
5CET
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BU of 5cet by Molmil
Crystal structure of Rv2837c
Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA, MANGANESE (II) ION
Authors:Wang, F, He, Q, Zhu, D, Liu, S, Gu, L.
Deposit date:2015-07-07
Release date:2015-12-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Insight into the Mechanism of Rv2837c from Mycobacterium tuberculosis as a c-di-NMP Phosphodiesterase
J.Biol.Chem., 291, 2016
4RPA
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BU of 4rpa by Molmil
Crystal structure of inorganic pyrophosphatase from Staphylococcus aureus in complex with Mn2+
Descriptor: MANGANESE (II) ION, Probable manganese-dependent inorganic pyrophosphatase
Authors:Gajadeera, C.S, Tsodikov, O.V.
Deposit date:2014-10-30
Release date:2015-01-21
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of inorganic pyrophosphatase from Staphylococcus aureus reveals conformational flexibility of the active site.
J.Struct.Biol., 189, 2015
4PY9
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BU of 4py9 by Molmil
Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192
Descriptor: PHOSPHATE ION, Putative exopolyphosphatase-related protein, SODIUM ION
Authors:Seetharaman, J, Abashidze, M, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-03-26
Release date:2014-06-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192
To be Published
4LS9
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BU of 4ls9 by Molmil
Structure of mycobacterial nrnA homolog reveals multifunctional nuclease activities
Descriptor: DHH family protein, GLYCEROL, MANGANESE (II) ION
Authors:Kumar, D, Srivastav, R, Grover, A, Manjasetty, B.A, Sharma, R, Taneja, B.
Deposit date:2013-07-22
Release date:2014-07-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Unique subunit packing in mycobacterial nanoRNase leads to alternate substrate recognitions in DHH phosphodiesterases
Nucleic Acids Res., 42, 2014
3W5W
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BU of 3w5w by Molmil
Mn2+-GMP complex of nanoRNase (Nrn) from Bacteroides fragilis
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Putative exopolyphosphatase-related protein
Authors:Uemura, Y, Nakagawa, N, Wakamatsu, T, Montelione, G.T, Hunt, J.F, Masui, R, Kuramitsu, S.
Deposit date:2013-02-07
Release date:2013-07-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of the ligand-binding form of nanoRNase from Bacteroides fragilis, a member of the DHH/DHHA1 phosphoesterase family of proteins.
Febs Lett., 587, 2013
3L31
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BU of 3l31 by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with the inhibitor, AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-16
Release date:2010-04-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
3L2B
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BU of 3l2b by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with activator, diadenosine tetraphosphate
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-15
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
3DEV
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BU of 3dev by Molmil
Crystal structure of SH1221 protein from Staphylococcus haemolyticus, Northeast Structural Genomics Consortium Target ShR87
Descriptor: MAGNESIUM ION, SH1221, SULFATE ION
Authors:Forouhar, F, Neely, H, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-06-10
Release date:2008-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of SH1221 protein from Staphylococcus haemolyticus, Northeast Structural Genomics Consortium Target ShR87
To be Published
2ZXR
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BU of 2zxr by Molmil
Crystal structure of RecJ in complex with Mg2+ from Thermus thermophilus HB8
Descriptor: MAGNESIUM ION, Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
2ZXP
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BU of 2zxp by Molmil
Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8
Descriptor: MANGANESE (II) ION, Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
2ZXO
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BU of 2zxo by Molmil
Crystal structure of RecJ from Thermus thermophilus HB8
Descriptor: Single-stranded DNA specific exonuclease RecJ
Authors:Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S.
Deposit date:2009-01-05
Release date:2010-01-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of RecJ exonuclease defines its specificity for single-stranded DNA
J.Biol.Chem., 285, 2010
2QB8
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BU of 2qb8 by Molmil
Saccharomyces cerevisiae cytosolic exopolyphosphatase, ATP complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Exopolyphosphatase, MAGNESIUM ION
Authors:White, S.A, Ugochukwu, E.
Deposit date:2007-06-16
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity.
J.Mol.Biol., 371, 2007
2QB7
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BU of 2qb7 by Molmil
Saccharomyces cerevisiae cytosolic exopolyphosphatase, phosphate complex
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:White, S.A, Ugochukwu, E.
Deposit date:2007-06-16
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity.
J.Mol.Biol., 371, 2007
2QB6
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BU of 2qb6 by Molmil
Saccharomyces cerevisiae cytosolic exopolyphosphatase, sulfate complex
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Exopolyphosphatase, ...
Authors:White, S.A, Ugochukwu, E.
Deposit date:2007-06-16
Release date:2007-12-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity.
J.Mol.Biol., 371, 2007
2IW4
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BU of 2iw4 by Molmil
CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP
Descriptor: FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ...
Authors:Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
Deposit date:2006-06-26
Release date:2006-11-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase.
J.Biol.Chem., 282, 2007
2HAW
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BU of 2haw by Molmil
Crystal structure of family II Inorganic pyrophosphatase in complex with PNP
Descriptor: CHLORIDE ION, FLUORIDE ION, GLYCEROL, ...
Authors:Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
Deposit date:2006-06-13
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A trimetal site and substrate distortion in a family II inorganic pyrophosphatase
J.Biol.Chem., 282, 2007

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