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6AZ6
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BU of 6az6 by Molmil
Streptococcus agalactiae GntR
Descriptor: GntR family transcriptional regulator
Authors:Pellock, S.J, Redinbo, M.R.
Deposit date:2017-09-10
Release date:2017-12-20
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:Structural basis for the regulation of beta-glucuronidase expression by human gut Enterobacteriaceae.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XGF
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BU of 5xgf by Molmil
The fatty acid-responsive FadR repressor of Vibrio alginolyticus
Descriptor: Fatty acid metabolism regulator protein, NICKEL (II) ION
Authors:Lin, Y, Li, D.F, Feng, Y.J.
Deposit date:2017-04-13
Release date:2017-05-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Snapshort of Vibrio FadR-ligand complex structure reveals a new mechanism for bacterial fatty acid sensing
To Be Published
2RA5
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BU of 2ra5 by Molmil
Crystal structure of the putative transcriptional regulator from Streptomyces coelicolor
Descriptor: ISOPROPYL ALCOHOL, Putative transcriptional regulator, S,R MESO-TARTARIC ACID
Authors:Kim, Y, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-14
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the putative transcriptional regulator from Streptomyces coelicolor.
To be Published
3SXY
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BU of 3sxy by Molmil
Metal-free full-length structure of Tm0439, a metal-binding FCD family transcriptional regulator
Descriptor: Transcriptional regulator, GntR family
Authors:Czelakowski, G.P, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2011-07-15
Release date:2011-11-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.647 Å)
Cite:Metal-free full-length structure of Tm0439, a metal-binding FCD family transcriptional regulator
To be Published
3IHU
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BU of 3ihu by Molmil
Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
Descriptor: CHLORIDE ION, GLYCEROL, Transcriptional regulator, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-07-30
Release date:2009-08-11
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of DNA binding protein (YP_298823.1) from Ralstonia eutropha JMP134 at 1.92 A resolution
To be published
6WG7
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BU of 6wg7 by Molmil
Coordinates of NanR dimer fitted in Hexameric NanR-DNA hetero-complex cryo-EM map
Descriptor: DNA (35-MER), HTH-type transcriptional repressor NanR
Authors:Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D.
Deposit date:2020-04-05
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (8.3 Å)
Cite:Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism.
Nat Commun, 12, 2021
6WFQ
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BU of 6wfq by Molmil
NanR dimer-DNA hetero-complex
Descriptor: DNA (5'-D(P*GP*GP*TP*AP*TP*AP*AP*CP*AP*GP*GP*TP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*AP*CP*CP*TP*GP*TP*TP*AP*TP*AP*CP*C)-3'), HTH-type transcriptional repressor NanR
Authors:Hariprasad, V, Horne, C, Santosh, P, Amy, H, Emre, B, Rachel, N, Michael, G, Georg, R, Borries, D, Renwick, D.
Deposit date:2020-04-03
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Mechanism of NanR gene repression and allosteric induction of bacterial sialic acid metabolism.
Nat Commun, 12, 2021
7B5Y
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BU of 7b5y by Molmil
S. agalactiae BusR in complex with its busAB-promotor DNA
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, BusR binding site in the busAB promotor. strand1, BusR binding site in the busAB promotor. strand2, ...
Authors:Bandera, A.M, Witte, G.
Deposit date:2020-12-07
Release date:2021-08-11
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture.
Nucleic Acids Res., 49, 2021
7B5T
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BU of 7b5t by Molmil
S. agalactiae BusR transcription factor
Descriptor: GntR family transcriptional regulator
Authors:Bandera, A.M, Witte, G.
Deposit date:2020-12-07
Release date:2021-08-11
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture.
Nucleic Acids Res., 49, 2021
7C7E
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BU of 7c7e by Molmil
Crystal structure of C terminal domain of Escherichia coli DgoR
Descriptor: Putative DNA-binding transcriptional regulator, SULFATE ION, TRIETHYLENE GLYCOL, ...
Authors:Lin, W.
Deposit date:2020-05-25
Release date:2021-01-20
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Structural and Functional Analyses of the Transcription Repressor DgoR From Escherichia coli Reveal a Divalent Metal-Containing D-Galactonate Binding Pocket.
Front Microbiol, 11, 2020
2DI3
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BU of 2di3 by Molmil
Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum
Descriptor: Bacterial regulatory proteins, GntR family, ZINC ION
Authors:Gao, Y.G, Yao, M, Tanaka, I.
Deposit date:2006-03-28
Release date:2007-03-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization
Nucleic Acids Res., 36, 2008
1E2X
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BU of 1e2x by Molmil
FadR, fatty acid responsive transcription factor from E. coli
Descriptor: FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION
Authors:Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J, Wierenga, R.K.
Deposit date:2000-05-30
Release date:2000-12-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Fadr, a Fatty Acid-Responsive Transcription Factor with a Novel Acyl Coenzyme A-Binding Fold
Embo J., 19, 2000
4U0V
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BU of 4u0v by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, HTH-type transcriptional repressor YvoA
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0W
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BU of 4u0w by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLYCEROL, ...
Authors:Fillenberg, S.B, Muller, Y.A.
Deposit date:2014-07-14
Release date:2015-01-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
6ZA0
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BU of 6za0 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum (P21212 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA3
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BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZAB
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BU of 6zab by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Naretto, A, Vigouroux, A, Legrand, P.
Deposit date:2020-06-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6Z74
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BU of 6z74 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, V.
Deposit date:2020-05-29
Release date:2020-12-02
Last modified:2021-01-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA7
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BU of 6za7 by Molmil
Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
4P96
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BU of 4p96 by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae
Descriptor: Fatty acid metabolism regulator protein
Authors:Shi, W, Kull, F.J.
Deposit date:2014-04-02
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
4P9U
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BU of 4p9u by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with DNA
Descriptor: DNA (31-MER), Fatty acid metabolism regulator protein
Authors:Kull, F.J, Shi, W.
Deposit date:2014-04-05
Release date:2015-02-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.208 Å)
Cite:The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
1H9G
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BU of 1h9g by Molmil
FadR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI, in complex with myristoyl-CoA
Descriptor: COENZYME A, FATTY ACID METABOLISM REGULATOR PROTEIN, MYRISTIC ACID
Authors:Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J.
Deposit date:2001-03-09
Release date:2001-03-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr
Embo J., 20, 2001
1H9T
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BU of 1h9t by Molmil
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
Descriptor: 5'-D(*CP*AP*TP*CP*TP*GP*GP*TP*AP*CP*GP*AP* CP*CP*AP*GP*AP*TP*C)-3', 5'-D(*GP*AP*TP*CP*TP*GP*GP*TP*CP*GP*TP*AP* CP*CP*AP*GP*AP*TP*G)-3', CHLORIDE ION, ...
Authors:Van Aalten, D.M.F, Dirusso, C.C, Knudsen, J.
Deposit date:2001-03-19
Release date:2001-04-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr
Embo J., 20, 2001
4PDK
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BU of 4pdk by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with oleoyl-CoA
Descriptor: Fatty acid metabolism regulator protein, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
Authors:Shi, W, Kull, F.J.
Deposit date:2014-04-19
Release date:2015-02-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
1HW1
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BU of 1hw1 by Molmil
THE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ESCHERICHIA COLI
Descriptor: FATTY ACID METABOLISM REGULATOR PROTEIN, SULFATE ION, ZINC ION
Authors:Xu, Y, Heath, R.J, Li, Z, Rock, C.O, White, S.W.
Deposit date:2001-01-09
Release date:2001-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli.
J.Biol.Chem., 276, 2001

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