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2GXS
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BU of 2gxs by Molmil
HERA N-terminal domain in complex with AMP, crystal form 2
Descriptor: ADENOSINE MONOPHOSPHATE, CALCIUM ION, GLYCEROL, ...
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2006-05-09
Release date:2006-08-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2GXU
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BU of 2gxu by Molmil
HERA N-terminal domain in complex with orthophosphate, crystal form 1
Descriptor: PHOSPHATE ION, heat resistant RNA dependent ATPase
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2006-05-09
Release date:2006-08-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2GXQ
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BU of 2gxq by Molmil
HERA N-terminal domain in complex with AMP, crystal form 1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, heat resistant RNA dependent ATPase
Authors:Rudolph, M.G, Klostermeier, D.
Deposit date:2006-05-09
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain.
J.Mol.Biol., 351, 2006
2KBE
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BU of 2kbe by Molmil
solution structure of amino-terminal domain of Dbp5p
Descriptor: ATP-dependent RNA helicase DBP5
Authors:Fan, J.S, Zhang, J, Yang, D.
Deposit date:2008-11-27
Release date:2009-10-13
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides.
J.Mol.Biol., 388, 2009
3B7G
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BU of 3b7g by Molmil
Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate)
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Probable ATP-dependent RNA helicase DDX20
Authors:Karlberg, T, Tresaugues, L, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-10-30
Release date:2007-11-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
3BER
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BU of 3ber by Molmil
Human DEAD-box RNA-helicase DDX47, conserved domain I in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Probable ATP-dependent RNA helicase DDX47, ...
Authors:Karlberg, T, Busam, R.D, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Kallas, A, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-11-20
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
3BOR
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BU of 3bor by Molmil
Crystal structure of the DEADc domain of human translation initiation factor 4A-2
Descriptor: Human initiation factor 4A-II
Authors:Dimov, S, Hong, B, Tempel, W, MacKenzie, F, Karlberg, T, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-12-17
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
3DKP
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BU of 3dkp by Molmil
Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Lehtio, L, Karlberg, T, Andersson, J, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, van den Berg, S, Welin, M, Wisniewska, M, Wikstrom, M, Schueler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-06-25
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
3FHC
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BU of 3fhc by Molmil
Crystal structure of human Dbp5 in complex with Nup214
Descriptor: ATP-dependent RNA helicase DDX19B, Nuclear pore complex protein Nup214
Authors:von Moeller, H, Conti, E.
Deposit date:2008-12-09
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The mRNA export protein DBP5 binds RNA and the cytoplasmic nucleoporin NUP214 in a mutually exclusive manner
Nat.Struct.Mol.Biol., 16, 2009
3FE2
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BU of 3fe2 by Molmil
Human DEAD-BOX RNA helicase DDX5 (P68), conserved domain I in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Probable ATP-dependent RNA helicase DDX5, ...
Authors:Karlberg, T, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Wikstrom, M, Wisniewska, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-11-27
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases
Plos One, 5, 2010
3FMO
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BU of 3fmo by Molmil
Crystal structure of the nucleoporin Nup214 in complex with the DEAD-box helicase Ddx19
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX19B, GLYCEROL, ...
Authors:Napetschnig, J, Debler, E.W, Blobel, G, Hoelz, A.
Deposit date:2008-12-22
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural and functional analysis of the interaction between the nucleoporin Nup214 and the DEAD-box helicase Ddx19.
Proc.Natl.Acad.Sci.USA, 106, 2009
7DTK
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BU of 7dtk by Molmil
Crystal structure of the RecA1 domain of RNA helicase CGH-1 in C. elegans
Descriptor: ATP-dependent RNA helicase cgh-1, GLYCEROL
Authors:Hong, J.J, Lv, M.Q, Zhang, Y.
Deposit date:2021-01-05
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.849 Å)
Cite:Structural and biochemical insights into the recognition of RNA helicase CGH-1 by CAR-1 in C. elegans.
Biochem.Biophys.Res.Commun., 549, 2021
8PNK
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BU of 8pnk by Molmil
Crystal structure of the Ded1p RecA1 domain
Descriptor: ATP-dependent RNA helicase DED1
Authors:Huebner, J, Sprangers, R.
Deposit date:2023-06-30
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Ded1p RecA1 domain
To Be Published
4A4D
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BU of 4a4d by Molmil
Crystal structure of the N-terminal domain of the Human DEAD-BOX RNA helicase DDX5 (P68)
Descriptor: PROBABLE ATP-DEPENDENT RNA HELICASE DDX5
Authors:Dutta, S, Choi, Y.W, Kotaka, M, Fielding, B.C, Tan, Y.J.
Deposit date:2011-10-11
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Variable N-Terminal Region of Ddx5 Contains Structural Elements and Auto-Inhibits its Interaction with Ns5B of Hepatitis C Virus.
Biochem.J., 446, 2012
5ZBZ
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BU of 5zbz by Molmil
Crystal structure of the DEAD domain of Human eIF4A with sanguinarine
Descriptor: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Eukaryotic initiation factor 4A-I, MALONATE ION
Authors:Ding, Y, Ding, L.
Deposit date:2018-02-14
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.30860257 Å)
Cite:Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling.
Cell Chem Biol, 26, 2019
6AIB
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BU of 6aib by Molmil
Crystal structures of the N-terminal RecA-like domain 1 of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA
Descriptor: DEAD-box ATP-dependent RNA helicase CshA
Authors:Chengliang, W, Tian, T, Xiaobao, C, Xuan, Z, Jianye, Z.
Deposit date:2018-08-22
Release date:2018-11-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP
Acta Crystallogr F Struct Biol Commun, 74, 2018
6AIC
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BU of 6aic by Molmil
Crystal structures of the N-terminal domain of Staphylococcus aureus DEAD-box Cold shock RNA helicase CshA in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, DEAD-box ATP-dependent RNA helicase CshA
Authors:Tian, T, Chengliang, W, Xiaobao, C, Xuan, Z, Jianye, Z.
Deposit date:2018-08-22
Release date:2018-11-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the N-terminal domain of the Staphylococcus aureus DEAD-box RNA helicase CshA and its complex with AMP
Acta Crystallogr F Struct Biol Commun, 74, 2018
4W7S
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BU of 4w7s by Molmil
Crystal structure of the yeast DEAD-box splicing factor Prp28 at 2.54 Angstroms resolution
Descriptor: GLYCEROL, HEXAETHYLENE GLYCOL, MAGNESIUM ION, ...
Authors:Jacewicz, A, Smith, P, Schwer, B, Shuman, S.
Deposit date:2014-08-22
Release date:2014-10-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.542 Å)
Cite:Crystal structure, mutational analysis and RNA-dependent ATPase activity of the yeast DEAD-box pre-mRNA splicing factor Prp28.
Nucleic Acids Res., 42, 2014
1HV8
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BU of 1hv8 by Molmil
CRYSTAL STRUCTURE OF A DEAD BOX PROTEIN FROM THE HYPERTHERMOPHILE METHANOCOCCUS JANNASCHII
Descriptor: PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669, SULFATE ION
Authors:Story, R.M, Li, H, Abelson, J.N.
Deposit date:2001-01-08
Release date:2001-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a DEAD box protein from the hyperthermophile Methanococcus jannaschii.
Proc.Natl.Acad.Sci.USA, 98, 2001
2DB3
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BU of 2db3 by Molmil
Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa
Descriptor: 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3', ATP-dependent RNA helicase vasa, MAGNESIUM ION, ...
Authors:Sengoku, T, Nureki, O, Nakamura, A, Kobayashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-12-14
Release date:2006-05-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa.
Cell(Cambridge,Mass.), 125, 2006
7ZNL
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BU of 7znl by Molmil
Structure of the human TREX core THO-UAP56 complex
Descriptor: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ...
Authors:Pacheco-Fiallos, F.B, Vorlaender, M.K, Plaschka, C.
Deposit date:2022-04-21
Release date:2023-05-17
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:mRNA recognition and packaging by the human transcription-export complex.
Nature, 616, 2023
7LUV
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BU of 7luv by Molmil
Cryo-EM structure of the yeast THO-Sub2 complex
Descriptor: ATP-dependent RNA helicase SUB2, THO complex subunit 2, THO complex subunit HPR1, ...
Authors:Xie, Y, Ren, Y.
Deposit date:2021-02-23
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the yeast TREX complex and coordination with the SR-like protein Gbp2.
Elife, 10, 2021
7LIU
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BU of 7liu by Molmil
DDX3X bound to ATP analog and remodeled RNA:DNA hybrid
Descriptor: 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C)-3', ATP-dependent RNA helicase DDX3X, MAGNESIUM ION, ...
Authors:Enemark, E.J, Yu, S.
Deposit date:2021-01-27
Release date:2022-08-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:DDX3X bound to ATP analog and remodeled RNA:DNA hybrid
To Be Published
7MQJ
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BU of 7mqj by Molmil
Dhr1 Helicase Core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable ATP-dependent RNA helicase DHR1
Authors:Miller, L, Chaker-Margot, M, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
1FUU
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BU of 1fuu by Molmil
YEAST INITIATION FACTOR 4A
Descriptor: YEAST INITIATION FACTOR 4A
Authors:Caruthers, J.M, Johnson, E.R, McKay, D.B.
Deposit date:2000-09-15
Release date:2000-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase.
Proc.Natl.Acad.Sci.USA, 97, 2000

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PDB entries from 2024-03-27

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