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Mine: Large structure entries

6AHD
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THE CRYO-EM STRUCTURE OF HUMAN PRE-CATALYTIC SPLICEOSOME (B COMPLEX) AT 3.8 ANGSTROM RESOLUTION
Descriptor:Pre-mRNA-processing-splicing factor 8, U4snRNA, U5snRNA, ...
Authors:Zhan, X., Yan, C., Zhang, X., Shi, Y.
Deposit date:2018-08-17
Release date:2018-11-14
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of the human pre-catalytic spliceosome and its precursor spliceosome.
Cell Res., 28, 2018
6BUW
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THERMUS THERMOPHILUS 70S COMPLEX CONTAINING 16S G299A RAM MUTATION AND EMPTY A SITE.
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Hoffer, E.D., Maehigashi, T., Fagan, C.E., Dunham, C.M.
Deposit date:2017-12-11
Release date:2018-11-14
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BZ6
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THERMUS THERMOPHILUS 70S COMPLEX CONTAINING 16S G347U RAM MUTATION AND EMPTY A SITE
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Hoffer, E.D., Maehigashi, T., Fagan, C.E., Dunham, C.M.
Deposit date:2017-12-22
Release date:2018-11-14
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BZ7
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THERMUS THERMOPHILUS 70S CONTAINING 16S G299A POINT MUTATION AND NEAR-COGNATE ASL LEUCINE IN A SITE.
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Hoffer, E.D., Maehigashi, T., Fagan, C.E., Dunham, C.M.
Deposit date:2017-12-22
Release date:2018-11-14
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.68 Å)
Cite:Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6BZ8
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THERMUS THERMOPHILUS 70S CONTAINING 16S G347U POINT MUTATION AND NEAR-COGNATE ASL LEUCINE IN A SITE
Descriptor:16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ...
Authors:Hoffer, E.D., Maehigashi, T., Fagan, C.E., Dunham, C.M.
Deposit date:2017-12-22
Release date:2018-11-14
Last modified:2019-07-03
Method:X-RAY DIFFRACTION (3.74 Å)
Cite:Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.
Nucleic Acids Res., 47, 2019
6GZQ
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T. THERMOPHILUS HIBERNATING 70S RIBOSOME
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-04
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
6GZX
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T. THERMOPHILUS HIBERNATING 100S RIBOSOME (ICE)
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-05
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (4.57 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
6GZZ
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T. THERMOPHILUS HIBERNATING 100S RIBOSOME (AMC)
Descriptor:50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ...
Authors:Flygaard, R.K., Jenner, L.B.
Deposit date:2018-07-05
Release date:2018-10-24
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
Nat Commun, 9, 2018
6HCF
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STRUCTURE OF THE RABBIT 80S RIBOSOME STALLED ON GLOBIN MRNA AT THE STOP CODON
Descriptor:18S ribosomal RNA, uS2, 40S ribosomal protein S3a, ...
Authors:Juszkiewicz, S., Chandrasekaran, V., Lin, Z., Kraatz, S., Ramakrishnan, V., Hegde, R.S.
Deposit date:2018-08-14
Release date:2018-10-17
Last modified:2019-01-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018
6HCJ
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STRUCTURE OF THE RABBIT 80S RIBOSOME ON GLOBIN MRNA IN THE ROTATED STATE WITH A/P AND P/E TRNAS
Descriptor:28S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Juszkiewicz, S., Chandrasekaran, V., Lin, Z., Kraatz, S., Ramakrishnan, V., Hegde, R.S.
Deposit date:2018-08-15
Release date:2018-10-17
Last modified:2018-11-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018
6HCM
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STRUCTURE OF THE RABBIT COLLIDED DI-RIBOSOME (STALLED MONOSOME)
Descriptor:18S ribosomal RNA, uS2, 40S ribosomal protein S3a, ...
Authors:Juszkiewicz, S., Chandrasekaran, V., Lin, Z., Kraatz, S., Ramakrishnan, V., Hegde, R.S.
Deposit date:2018-08-15
Release date:2018-10-17
Last modified:2019-01-23
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018
6HCQ
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STRUCTURE OF THE RABBIT COLLIDED DI-RIBOSOME (COLLIDED MONOSOME)
Descriptor:28S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Juszkiewicz, S., Chandrasekaran, V., Lin, Z., Kraatz, S., Ramakrishnan, V., Hegde, R.S.
Deposit date:2018-08-16
Release date:2018-10-17
Last modified:2018-11-14
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018
5ZZ8
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STRUCTURE OF THE HERPES SIMPLEX VIRUS TYPE 2 C-CAPSID WITH CAPSID-VERTEX-SPECIFIC COMPONENT
Descriptor:VP19C, VP23, Major capsid protein, ...
Authors:Wang, J.L., Yuan, S., Zhu, D.J., Tang, H., Wang, N., Chen, W.Y., Gao, Q., Li, Y.H., Wang, J.Z., Liu, H.R., Zhang, X.Z., Rao, Z.H., Wang, X.X.
Deposit date:2018-05-31
Release date:2018-10-10
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component.
Nat Commun, 9, 2018
6H6E
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PTC3 HOLOTOXIN COMPLEX FROM PHOTORHABDUS LUMINECENS IN PREPORE STATE (TCDA1, TCDB2, TCCC3)
Descriptor:TcdA1, TcdB2,TccC3
Authors:Gatsogiannis, C., Merino, F., Roderer, D., Balchin, D., Schubert, E., Kuhlee, A., Hayer-Hartl, M., Raunser, S.
Deposit date:2018-07-27
Release date:2018-10-03
Last modified:2018-11-14
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Tc toxin activation requires unfolding and refolding of a beta-propeller.
Nature, 563, 2018
6H6F
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PTC3 HOLOTOXIN COMPLEX FROM PHOTORHABDUS LUMINISCENS - MUTANT TCC-D651A
Descriptor:TcdA1, TcdB2,TccC3,TccC3
Authors:Gatsogiannis, C., Merino, F., Roderer, D., Balchin, D., Schubert, E., Kuhlee, A., Hayer-Hartl, M., Raunser, S.
Deposit date:2018-07-27
Release date:2018-10-03
Last modified:2018-11-14
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Tc toxin activation requires unfolding and refolding of a beta-propeller.
Nature, 563, 2018
6HIV
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CRYO-EM STRUCTURE OF THE TRYPANOSOMA BRUCEI MITOCHONDRIAL RIBOSOME - THIS ENTRY CONTAINS THE COMPLETE MITORIBOSOME
Descriptor:ms48, ms51, ms56, ...
Authors:Ramrath, D.J.F., Niemann, M., Leibundgut, M., Bieri, P., Prange, C., Horn, E.K., Leitner, A., Boerhringer, D., Schneider, A., Ban, N.
Deposit date:2018-08-31
Release date:2018-10-03
Last modified:2018-11-07
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
5VPO
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THE 70S P-SITE ASL SUFA6 COMPLEX
Descriptor:messenger RNA, 16S rRNA, 30S ribosomal protein S2, ...
Authors:Hong, S., Sunita, S., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5VPP
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THE 70S P-SITE TRNA SUFA6 COMPLEX
Descriptor:23S rRNA, 5S rRNA, 50S ribosomal protein L2, ...
Authors:Hong, S., Sunita, S., Dunkle, J.A., Maehigashi, T., Dunham, C.M.
Deposit date:2017-05-05
Release date:2018-09-26
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Mechanism of tRNA-mediated +1 ribosomal frameshifting.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5ZEB
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M. SMEGMATIS P/P STATE 70S RIBOSOME STRUCTURE
Descriptor:16S rRNA, 30S ribosomal protein S3, 30S ribosomal protein S5, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-27
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
5ZEP
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M. SMEGMATIS HIBERNATING STATE 70S RIBOSOME STRUCTURE
Descriptor:16S rRNA, 30S ribosomal protein S3, 30S ribosomal protein S5, ...
Authors:Mishra, S., Ahmed, T., Tyagi, A., Shi, J., Bhushan, S.
Deposit date:2018-02-27
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Mycobacterium smegmatis 70S ribosomes in complex with HPF, tmRNA, and P-tRNA.
Sci Rep, 8, 2018
6DZI
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CRYO-EM STRUCTURE OF MYCOBACTERIUM SMEGMATIS 70S C(MINUS) RIBOSOME 70S-MPY COMPLEX
Descriptor:16S rRNA, CONSERVED PROTEIN DOMAIN, 30S ribosomal protein S3, ...
Authors:Sharma, M.R., Li, Y., Korripella, R., Yang, Y., Kaushal, P.S., Lin, Q., Wade, J.T., Gray, A.G., Derbyshire, K.M., Agrawal, R.K., Ojha, A.
Deposit date:2018-07-05
Release date:2018-09-26
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Zinc depletion induces ribosome hibernation in mycobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HIW
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CRYO-EM STRUCTURE OF THE TRYPANOSOMA BRUCEI MITOCHONDRIAL RIBOSOME - THIS ENTRY CONTAINS THE COMPLETE SMALL MITORIBOSOMAL SUBUNIT IN COMPLEX WITH MT-IF-3
Descriptor:mS48, mS51, mS56, ...
Authors:Ramrath, D., Niemann, M., Leibundgut, M., Bieri, P., Prange, C., Horn, E.K., Leitner, A., Boehringer, D., Schneider, A., Ban, N.
Deposit date:2018-08-31
Release date:2018-09-26
Last modified:2018-11-07
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
6HIX
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CRYO-EM STRUCTURE OF THE TRYPANOSOMA BRUCEI MITOCHONDRIAL RIBOSOME - THIS ENTRY CONTAINS THE LARGE MITORIBOSOMAL SUBUNIT
Descriptor:bl27m, bl28m, ul29m, ...
Authors:Ramrath, D.J.F., Niemann, M., Leibundgut, M., Bieri, P., Prange, C., Horn, K., Leitner, A., Boehringer, D., Schneider, A., Ban, N.
Deposit date:2018-08-31
Release date:2018-09-26
Last modified:2019-02-06
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
6HIY
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CRYO-EM STRUCTURE OF THE TRYPANOSOMA BRUCEI MITOCHONDRIAL RIBOSOME - THIS ENTRY CONTAINS THE BODY OF THE SMALL MITORIBOSOMAL SUBUNIT IN COMPLEX WITH MT-IF-3
Descriptor:mS48, mS51, mS56, ...
Authors:Ramrath, D.J.F., Niemann, M., Leibundgut, M., Bieri, P., Prange, C., Horn, E.K., Leitner, A., Boehringer, D., Schneider, A., Ban, N.
Deposit date:2018-08-31
Release date:2018-09-26
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
6HIZ
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CRYO-EM STRUCTURE OF THE TRYPANOSOMA BRUCEI MITOCHONDRIAL RIBOSOME - THIS ENTRY CONTAINS THE HEAD OF THE SMALL MITORIBOSOMAL SUBUNIT
Descriptor:mS48, mS59, mS49, ...
Authors:Ramrath, D.J.F., Niemann, M., Leibundgut, M., Bieri, P., Prange, C., Horn, E.K., Leitner, A., Boehringer, A., Schneider, A., Ban, N.
Deposit date:2018-08-31
Release date:2018-09-26
Last modified:2018-11-07
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018