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2N6J
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BU of 2n6j by Molmil
Solution structure of Zmp1, a zinc-dependent metalloprotease secreted by Clostridium difficile
Descriptor: ZINC ION, Zinc metalloprotease Zmp1
Authors:Banci, L, Cantini, F, Scarselli, M, Rubino, J.T, Martinelli, M.
Deposit date:2015-08-24
Release date:2016-01-13
Last modified:2016-04-06
Method:SOLUTION NMR
Cite:Structural characterization of zinc-bound Zmp1, a zinc-dependent metalloprotease secreted by Clostridium difficile.
J.Biol.Inorg.Chem., 21, 2016
5N12
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BU of 5n12 by Molmil
Crystal structure of TCE treated rPPEP-1
Descriptor: 2,2,2-tris-chloroethanol, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ...
Authors:Pichlo, C, Schacherl, M, Baumann, U.
Deposit date:2017-02-04
Release date:2018-05-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6FPC
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BU of 6fpc by Molmil
Structure of the PRO-PRO endopeptidase (PPEP-2) from Paenibacillus alvei
Descriptor: CADMIUM ION, PRO-PRO endopeptidase, SULFATE ION, ...
Authors:Weeks, S.D, Klychnikov, O.I, Hensbergen, P.J, Strelkov, S.V.
Deposit date:2018-02-09
Release date:2018-05-30
Last modified:2018-07-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of a new Pro-Pro endopeptidase, PPEP-2, provides mechanistic insights into the differences in substrate specificity within the PPEP family.
J. Biol. Chem., 293, 2018
2L0R
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BU of 2l0r by Molmil
Conformational Dynamics of the Anthrax Lethal Factor Catalytic Center
Descriptor: Lethal factor
Authors:Dalkas, G.A, Chasapis, C.T, Gkazonis, P.V, Bentrop, D.A, Spyroulias, G.A.
Deposit date:2010-07-15
Release date:2010-12-22
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Conformational dynamics of the anthrax lethal factor catalytic center.
Biochemistry, 49, 2010
5A0R
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BU of 5a0r by Molmil
Product peptide-bound structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
Descriptor: GLYCEROL, PRODUCT PEPTIDE, ZINC ION, ...
Authors:Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.251 Å)
Cite:Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0P
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BU of 5a0p by Molmil
Apo-structure of metalloprotease Zmp1 from Clostridium difficile
Descriptor: ZINC ION, ZINC METALLOPROTEASE ZMP1
Authors:Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0X
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BU of 5a0x by Molmil
Substrate peptide-bound structure of metalloprotease Zmp1 variant E143AY178F from Clostridium difficile
Descriptor: SUBSTRATE PEPTIDE, ZINC ION, ZINC METALLOPROTEASE ZMP1
Authors:Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
Deposit date:2015-04-23
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
5A0S
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BU of 5a0s by Molmil
Apo-structure of metalloprotease Zmp1 variant E143A from Clostridium difficile
Descriptor: ZINC ION, ZINC METALLOPROTEASE ZMP1
Authors:Schacherl, M, Pichlo, C, Neundorf, I, Baumann, U.
Deposit date:2015-04-22
Release date:2015-08-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium Difficile.
Structure, 23, 2015
6R50
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BU of 6r50 by Molmil
Crystal structure of holo PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNAPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R5C
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BU of 6r5c by Molmil
Crystal structure of PPEP-1(W103F/E143A/Y178F) in complex with substrate peptide Ac-EVNPPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R4Y
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BU of 6r4y by Molmil
Crystal structure of holo PPEP-1(E143A/Y178F) in complex with product peptide Ac-EVNP-CO2 (substrate peptide: Ac-EVNPAVP-CONH2)
Descriptor: ACE-GLU-VAL-ASN-PRO, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R58
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BU of 6r58 by Molmil
Crystal structure of PPEP-1(E143A/Y178F/E184A) in complex with substrate peptide Ac-EVNAPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, NICKEL (II) ION, PHOSPHATE ION, ...
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R57
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BU of 6r57 by Molmil
Crystal structure of PPEP-1(E143A/Y178F/E184A) in complex with substrate peptide Ac-EVNPPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R51
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BU of 6r51 by Molmil
Crystal structure of apo PPEP-1(E143A/Y178F) in complex with fibrinogen-derived substrate peptide Ac-SLRPAPP-CONH2
Descriptor: ACE-SER-LEU-ARG-PRO-ALA-PRO-LPD, PHOSPHATE ION, Pro-Pro endopeptidase
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R4W
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BU of 6r4w by Molmil
Crystal structure of apo PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNAPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-ALA-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R56
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BU of 6r56 by Molmil
Crystal structure of PPEP-1(K101E/E184K)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R4Z
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BU of 6r4z by Molmil
Crystal structure of holo PPEP-1(E143A/Y178F) in complex with product peptide Ac-EVNP-CO2 (substrate peptide: Ac-EVNPPVP-CONH2)
Descriptor: ACE-GLU-VAL-ASN-PRO, NICKEL (II) ION, Pro-Pro endopeptidase, ...
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.052 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R59
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BU of 6r59 by Molmil
Crystal structure of PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVAPPVP-NH2
Descriptor: ACE-GLU-VAL-ALA-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R5B
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BU of 6r5b by Molmil
Crystal structure of PPEP-1(W103H/E143A/Y178F) in complex with substrate peptide Ac-EVNPPVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-PRO-PRO-VAL-LPD, Pro-Pro endopeptidase
Authors:Pichlo, C, Wojtalla, F, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R54
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BU of 6r54 by Molmil
Crystal structure of PPEP-1(E184A)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICKEL (II) ION, Pro-Pro endopeptidase, ...
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.417 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R4X
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BU of 6r4x by Molmil
Crystal structure of PPEP-1(E143A/Y178F) in complex with substrate peptide Ac-EVNPAVP-CONH2
Descriptor: ACE-GLU-VAL-ASN-PRO-ALA-VAL-LPD, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.831 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R55
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BU of 6r55 by Molmil
Crystal structure of PPEP-1(E184K)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R52
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BU of 6r52 by Molmil
Crystal structure of PPEP-1(K101A)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.022 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R53
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BU of 6r53 by Molmil
Crystal structure of PPEP-1(K101R)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6R5A
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BU of 6r5a by Molmil
Crystal structure of PPEP-1(W103F)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-Pro endopeptidase, ZINC ION
Authors:Pichlo, C, Baumann, U.
Deposit date:2019-03-24
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019

 

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數據於2024-03-27公開中

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