PDB: 3009 resultsInfo pagesStatus searchChemie searchBIRD

---

6HE9	PAN-proteasome in state 2 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (6.35 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HEA	PAN-proteasome in state 3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (7.04 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HEC	PAN-proteasome in state 4 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (6.95 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HE8	PAN-proteasome in state 1 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (6.86 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HED	PAN-proteasome in state 5 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (6.95 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1L8S	CARBOXYLIC ESTER HYDROLASE COMPLEX (DIMERIC PLA2 + LPC-ether + ACETATE + PHOSPHATE IONS) Descriptor: 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ACETATE ION, CALCIUM ION, ... Authors: Pan, Y.H, Bahnson, B.J. Deposit date: 2002-03-21 Release date: 2002-12-25 Last modified: 2018-01-31 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of phospholipase A2 Complex with the Hydrolysis Products of Platelet Activating Factor: Equilibrium Binding of Fatty Acid and Lysophospholipid-ether at the Active Site may be Mutually Exclusive Biochemistry, 41, 2002
1M6R	Crystal structure of rGd(CGCGCG) forming hexamer Z-DNA duplex with 5'-(rG) overhang Descriptor: 5'-R(*G)D(*CP*GP*CP*GP*CP*G)-3' Authors: Pan, B, Sundaralingam, M. Deposit date: 2002-07-17 Release date: 2003-02-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of rGd(CGCGCG): a Z-DNA hexamer duplex with a 5'-(rG) overhang. Acta Crystallogr.,Sect.D, 59, 2003
420D	CRYSTAL STRUCTURE OF A 16-MER RNA DUPLEX WITH NON-ADJACENT A(ANTI).G(SYN) MISMATCHES Descriptor: RNA (5'-R(*GP*CP*AP*GP*AP*GP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'), SODIUM ION Authors: Pan, B, Mitra, S.N, Sundaralingam, M. Deposit date: 1998-08-13 Release date: 1999-01-13 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of an RNA 16-mer duplex R(GCAGAGUUAAAUCUGC)2 with nonadjacent G(syn).A+(anti) mispairs. Biochemistry, 38, 1999
6HE5	20S core particle of PAN-proteasomes Descriptor: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-activating nucleotidase Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (4.12 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HAU	KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57 Descriptor: ACETATE ION, MRE fragment of PAN RNA, ZINC ION, ... Authors: Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P. Deposit date: 2018-08-08 Release date: 2018-11-21 Last modified: 2022-03-30 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition. Nucleic Acids Res., 47, 2019
8CYJ	RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 1-25, pan-sarbecovirus nanobody 2-10, ... Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
5ZVM	Crystal Structure of the Human Coronavirus SARS HR1 motif in complex with pan-CoVs inhibitor EK1 Descriptor: Spike glycoprotein, pan-CoV inhibitory peptide EK1 Authors: Yan, L, Yang, B, Wilson, I.A. Deposit date: 2018-05-11 Release date: 2019-04-10 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.3 Å) Cite: A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike. Sci Adv, 5, 2019
5ZVK	Crystal Structure of the Human Coronavirus MERS HR1 motif in complex with pan-CoVs inhibitor EK1 Descriptor: Human Coronavirus MERS HR1 motif, pan-CoV inhibitory peptide EK1 Authors: Yan, L, Yang, B, Wilson, I.A. Deposit date: 2018-05-11 Release date: 2019-04-10 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.31 Å) Cite: A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike. Sci Adv, 5, 2019
6HE4	AAA-ATPase ring of PAN-proteasomes Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Majumder, P, Rudack, T, Beck, F, Baumeister, W. Deposit date: 2018-08-20 Release date: 2018-12-26 Last modified: 2019-01-16 Method: ELECTRON MICROSCOPY (4.85 Å) Cite: Cryo-EM structures of the archaeal PAN-proteasome reveal an around-the-ring ATPase cycle. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
3IPM	Crystal Structure of Archaeal 20S Proteasome in Complex with the C-terminus of PAN Descriptor: Proteasome activator PA26, Proteasome-activating nucleotidase fusion protein, Proteasome subunit alpha, ... Authors: Yu, Y, Cheng, Y. Deposit date: 2009-08-17 Release date: 2009-12-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (4 Å) Cite: Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome-ATPase interactions. Embo J., 29, 2010
8CYD	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 2-45 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CY9	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 1-23 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CY7	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CXN	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-57 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, pan-sarbecovirus nanobody 2-57 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-22 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CY6	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-65 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 2-65 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CXQ	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-22 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 1-22 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-22 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CYC	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34 Descriptor: Spike glycoprotein, pan-sarbecovirus nanobody 2-34 Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CYB	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-8 Descriptor: 1-deoxy-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
8CYA	SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-67 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Huang, W, Taylor, D. Deposit date: 2022-05-23 Release date: 2022-07-06 Last modified: 2022-07-13 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Superimmunity by pan-sarbecovirus nanobodies. Cell Rep, 39, 2022
4KV5	scFv GC1009 in complex with TGF-beta1. Descriptor: Single-chain variable fragment GC1009, Transforming growth factor beta-1 proprotein Authors: Wei, R, Moulin, A.G, Mathieu, M. Deposit date: 2013-05-22 Release date: 2014-09-24 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (3 Å) Cite: Structures of a pan-specific antagonist antibody complexed to different isoforms of TGF beta reveal structural plasticity of antibody-antigen interactions. Protein Sci., 23, 2014

 

12345678910111213141516>