Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TDW
DownloadVisualize
BU of 8tdw by Molmil
ssRNA bound SAMHD1 T open
Descriptor: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, RNA (5'-R(P*CP*CP*GP*AP*CP*C)-3'), ...
Authors:Sung, M, Huynh, K, Han, S.
Deposit date:2023-07-05
Release date:2023-11-22
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Guanine-containing ssDNA and RNA induce dimeric and tetrameric structural forms of SAMHD1.
Nucleic Acids Res., 51, 2023
8TDV
DownloadVisualize
BU of 8tdv by Molmil
ssRNA bound SAMHD1 T closed
Descriptor: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, RNA (5'-R(P*CP*CP*GP*AP*CP*CP*C)-3'), ...
Authors:Sung, M, Huynh, K, Han, S.
Deposit date:2023-07-05
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Guanine-containing ssDNA and RNA induce dimeric and tetrameric structural forms of SAMHD1.
Nucleic Acids Res., 51, 2023
8P2M
DownloadVisualize
BU of 8p2m by Molmil
C. elegans TIR-1 protein.
Descriptor: NAD(+) hydrolase tir-1
Authors:Isupov, M.N, Opatowsky, Y.
Deposit date:2023-05-16
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (3.82 Å)
Cite:Structure-function analysis of ceTIR-1/hSARM1 explains the lack of Wallerian axonal degeneration in C. elegans.
Cell Rep, 42, 2023
8P2L
DownloadVisualize
BU of 8p2l by Molmil
A CHIMERA construct containing human SARM1 ARM and SAM domains and C. elegans TIR domain.
Descriptor: NAD(+) hydrolase SARM1,NAD(+) hydrolase tir-1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Isupov, M.N, Opatowsky, Y.
Deposit date:2023-05-16
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structure-function analysis of ceTIR-1/hSARM1 explains the lack of Wallerian axonal degeneration in C. elegans.
Cell Rep, 42, 2023
8BW8
DownloadVisualize
BU of 8bw8 by Molmil
Crystal structure of the dCNK-SAM-CRIC-PDZ/dHYP-SAM complex
Descriptor: Connector enhancer of KSR protein CNK, GLYCEROL, Protein aveugle
Authors:Maisonneuve, P, Kurinov, I, Sicheri, F.
Deposit date:2022-12-06
Release date:2024-02-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The CNK-HYP scaffolding complex promotes RAF activation by enhancing KSR-MEK interaction.
Nat.Struct.Mol.Biol., 2024
8BW9
DownloadVisualize
BU of 8bw9 by Molmil
Cryo-EM structure of the RAF activating complex KSR-MEK-CNK-HYP
Descriptor: Connector enhancer of KSR protein CNK, Dual specificity mitogen-activated protein kinase kinase dSOR1, KSR, ...
Authors:Maisonneuve, P, Fronzes, R, Sicheri, F.
Deposit date:2022-12-06
Release date:2024-02-21
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:The CNK-HYP scaffolding complex promotes RAF activation by enhancing KSR-MEK interaction.
Nat.Struct.Mol.Biol., 2024
8GQ5
DownloadVisualize
BU of 8gq5 by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, double-layer structure
Descriptor: NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-29
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNJ
DownloadVisualize
BU of 8gnj by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody-C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8GNI
DownloadVisualize
BU of 8gni by Molmil
Human SARM1 bounded with NMN and Nanobody-C6, Conformation 1
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1, Nanobody C6
Authors:Cai, Y, Zhang, H.
Deposit date:2022-08-24
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1.
Nat Commun, 13, 2022
8ALY
DownloadVisualize
BU of 8aly by Molmil
Cryo-EM structure of human tankyrase 2 SAM-PARP filament (G1032W mutant)
Descriptor: Poly [ADP-ribose] polymerase tankyrase-2, ZINC ION
Authors:Mariotti, L, Inian, O, Desfosses, A, Beuron, F, Morris, E.P, Guettler, S.
Deposit date:2022-08-01
Release date:2022-11-16
Last modified:2022-12-14
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structural basis of tankyrase activation by polymerization.
Nature, 612, 2022
8D9J
DownloadVisualize
BU of 8d9j by Molmil
SAMHD1-DNA complex
Descriptor: CALCIUM ION, DNA (5'-D(*CP*AP*AP*TP*G)-3'), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Hollis, T.J, Batalis, S.M.
Deposit date:2022-06-10
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:SAMHD1-DNA complex
To Be Published
8D94
DownloadVisualize
BU of 8d94 by Molmil
SAMHD1-DNA complex
Descriptor: CALCIUM ION, DNA (5'-D(P*TP*GP*T)-3'), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
Authors:Hollis, T.J, Batalis, S.M.
Deposit date:2022-06-09
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:SAMHD1-DNA complex
To Be Published
7UJN
DownloadVisualize
BU of 7ujn by Molmil
Structure of Human SAMHD1 with Non-Hydrolysable dGTP Analog
Descriptor: 2'-deoxyguanosine-5'-O-(1-thiotriphosphate), Deoxynucleoside triphosphate triphosphohydrolase SAMHD1
Authors:Huynh, K.W, Ammirati, M, Han, S.
Deposit date:2022-03-31
Release date:2022-07-20
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Phosphorylation of SAMHD1 Thr592 increases C-terminal domain dynamics, tetramer dissociation and ssDNA binding kinetics.
Nucleic Acids Res., 50, 2022
7Z72
DownloadVisualize
BU of 7z72 by Molmil
Crystal structure of p63 SAM in complex with darpin A5
Descriptor: DI(HYDROXYETHYL)ETHER, Darpin A5, Isoform 9 of Tumor protein 63
Authors:Chaikuad, A, Strubel, A, Doetsch, V, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-03-14
Release date:2022-07-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Designed Ankyrin Repeat Proteins as a tool box for analyzing p63.
Cell Death Differ., 29, 2022
7QG0
DownloadVisualize
BU of 7qg0 by Molmil
Inhibitor-induced hSARM1 duplex
Descriptor: NAD(+) hydrolase SARM1
Authors:Zalk, R, Kahzma, T, Guez-Haddad, J.
Deposit date:2021-12-07
Release date:2022-12-21
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (4.02 Å)
Cite:A duplex structure of SARM1 octamers stabilized by a new inhibitor.
Cell.Mol.Life Sci., 80, 2022
7NAK
DownloadVisualize
BU of 7nak by Molmil
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (TIR:1AD)
Descriptor: NAD(+) hydrolase SARM1, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(5-iodanylisoquinolin-2-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Kerry, P.S, Nanson, J.D, Adams, S, Cunnea, K, Bosanac, T, Kobe, B, Hughes, R.O, Ve, T.
Deposit date:2021-06-21
Release date:2022-03-23
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules.
Mol.Cell, 82, 2022
7NAL
DownloadVisualize
BU of 7nal by Molmil
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NAD(+) hydrolase SARM1
Authors:Kerry, P.S, Nanson, J.D, Adams, S, Cunnea, K, Bosanac, T, Kobe, B, Hughes, R.O, Ve, T.
Deposit date:2021-06-21
Release date:2022-03-23
Last modified:2022-05-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of SARM1 activation, substrate recognition, and inhibition by small molecules.
Mol.Cell, 82, 2022
7LD0
DownloadVisualize
BU of 7ld0 by Molmil
Cryo-EM structure of ligand-free Human SARM1
Descriptor: NAD(+) hydrolase SARM1
Authors:Nanson, J.D, Gu, W, Luo, Z, Jia, X, Landsberg, M.J, Kobe, B, Ve, T.
Deposit date:2021-01-12
Release date:2021-03-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:SARM1 is a metabolic sensor activated by an increased NMN/NAD + ratio to trigger axon degeneration.
Neuron, 109, 2021
7DJT
DownloadVisualize
BU of 7djt by Molmil
Human SARM1 inhibitory state bounded with inhibitor dHNN
Descriptor: NAD(+) hydrolase SARM1, O3-methyl O5-(2-methylpropyl) 2,6-dimethyl-4-[2-(oxidanylamino)phenyl]pyridine-3,5-dicarboxylate
Authors:Cai, Y, Zhang, H.
Deposit date:2020-11-21
Release date:2021-05-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Permeant fluorescent probes visualize the activation of SARM1 and uncover an anti-neurodegenerative drug candidate.
Elife, 10, 2021
7KNQ
DownloadVisualize
BU of 7knq by Molmil
SARM1 Octamer
Descriptor: NAD(+) hydrolase SARM1
Authors:Shen, C, Wu, H.
Deposit date:2020-11-05
Release date:2021-11-17
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Multiple domain interfaces mediate SARM1 autoinhibition.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ANW
DownloadVisualize
BU of 7anw by Molmil
hSARM1 NAD+ complex
Descriptor: NAD(+) hydrolase SARM1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Sporny, M, Guez-Haddad, J, Khazma, T, Yaron, A, Mim, C, Isupov, M.N, Zalk, R, Dessau, M, Hons, M, Opatowsky, Y.
Deposit date:2020-10-13
Release date:2020-11-11
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural basis for SARM1 inhibition and activation under energetic stress.
Elife, 9, 2020
7CM7
DownloadVisualize
BU of 7cm7 by Molmil
NAD+-bound Sarm1 E642A in the self-inhibited state
Descriptor: NAD(+) hydrolase SARM1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-25
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
7CM6
DownloadVisualize
BU of 7cm6 by Molmil
NAD+-bound Sarm1 in the self-inhibited state
Descriptor: NAD(+) hydrolase SARM1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-25
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
7CM5
DownloadVisualize
BU of 7cm5 by Molmil
Full-length Sarm1 in a self-inhibited state
Descriptor: NAD(+) hydrolase SARM1
Authors:Zhang, Z, Jiang, Y.
Deposit date:2020-07-24
Release date:2020-10-21
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The NAD + -mediated self-inhibition mechanism of pro-neurodegenerative SARM1.
Nature, 588, 2020
6ZG0
DownloadVisualize
BU of 6zg0 by Molmil
SARM1 SAM1-2 domains
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Sporny, M, Guez-Haddad, J, Khazma, T, Yaron, A, Dessau, M, Mim, C, Isupov, M.N, Zalk, R, Hons, M, Opatowsky, Y.
Deposit date:2020-06-18
Release date:2020-11-11
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural basis for SARM1 inhibition and activation under energetic stress.
Elife, 9, 2020

218500

건을2024-04-17부터공개중

PDB statisticsPDBj update infoContact PDBjnumon