PDB: 248 resultsInfo pagesStatus searchChemie searchBIRD

---

2WK4	Dimeric structure of D347G D348G mutant of the sapporovirus RNA dependent RNA polymerase Descriptor: GLYCEROL, PROTEASE-POLYMERASE P70 Authors: Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P.A, Rohayem, J. Deposit date: 2009-06-05 Release date: 2010-09-01 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.98 Å) Cite: Dimeric Structure of D347G D348G Mutant of the Sapporovirus Sapporovirus RNA Dependent RNA Polymerase To be Published
4A8F	Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation Descriptor: 5'-D(*DAP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M. Deposit date: 2011-11-21 Release date: 2012-07-04 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation. J.Virol., 86, 2012
4B02	The C-terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage phi6 RNA-Dependent RNA Polymerase Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE Authors: Sarin, L.P, Wright, S, Chen, Q, Degerth, L.H, Stuart, D.I, Grimes, J.M, Bamford, D.H, Poranen, M.M. Deposit date: 2012-06-27 Release date: 2012-08-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.3 Å) Cite: The C-Terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage Phi6 RNA-Dependent RNA Polymerase. Virology, 432, 2012
8C1N	FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group Descriptor: ACETATE ION, GLYCEROL, Protein 3B-1, ... Authors: Ferrer-Orta, C, Veraguer, N. Deposit date: 2022-12-20 Release date: 2023-04-26 Last modified: 2023-05-10 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes. Plos Pathog., 19, 2023
8C2P	FMDV 3D polymerase in complex with 3B3 Descriptor: Protein 3B-3, RNA-directed RNA polymerase 3D-POL Authors: Ferrer-Orta, C, Veraguer, N. Deposit date: 2022-12-22 Release date: 2023-04-26 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes. Plos Pathog., 19, 2023
1KHV	Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Lu3+ Descriptor: LUTETIUM (III) ION, RNA-DIRECTED RNA POLYMERASE Authors: Ng, K.K, Cherney, M.M, Vazquez, A.L, Machin, A, Alonso, J.M, Parra, F, James, M.N. Deposit date: 2001-12-01 Release date: 2002-01-16 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structures of active and inactive conformations of a caliciviral RNA-dependent RNA polymerase. J.Biol.Chem., 277, 2002
5N8X	Trigonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus Descriptor: 3D polymerase, GLYCEROL, MANGANESE (II) ION Authors: Ferrer-Orta, C, Verdaguer, N. Deposit date: 2017-02-24 Release date: 2017-05-10 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus. Genome Biol Evol, 9, 2017
5N95	Tetragonal structure of mutant V173I of 3D polymerase from Foot-and-Mouth Disease Virus Descriptor: 3D polymerase, TRIPHOSPHATE Authors: Ferrer-Orta, C, Verdaguer, N. Deposit date: 2017-02-24 Release date: 2017-05-10 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Molecular and Functional Bases of Selection against a Mutation Bias in an RNA Virus. Genome Biol Evol, 9, 2017
1KHW	Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Mn2+ Descriptor: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE Authors: Ng, K.K, Cherney, M.M, Vazquez, A.L, Machin, A, Alonso, J.M, Parra, F, James, M.N. Deposit date: 2001-12-01 Release date: 2002-01-16 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structures of active and inactive conformations of a caliciviral RNA-dependent RNA polymerase. J.Biol.Chem., 277, 2002
6GVV	Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus Descriptor: GLYCEROL, RNA polymerase 3D Authors: Verdaguer, N, Ferrer Orta, C. Deposit date: 2018-06-21 Release date: 2018-08-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis. J.Virol., 92, 2018
6GVY	Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA Descriptor: GLYCEROL, Genome polyprotein, RNA (5'-R(P*CP*CP*GP*GP*G)-3'), ... Authors: Verdaguer, N, Ferrer-Orta, C. Deposit date: 2018-06-21 Release date: 2018-08-01 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis. J. Virol., 92, 2018
2UUW	2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus RdRp Polymerase Descriptor: RNA-DIRECTED RNA POLYMERASE Authors: Fullerton, S, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P, Rohayem, J. Deposit date: 2007-03-07 Release date: 2007-05-01 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.76 Å) Cite: The 2.76 Angstrom Resolution Structure of the D347G D348G Mutant Structure of Sapporo Virus Rdrp Polymerase To be Published
2UUT	The 2.4 angstrom resolution structure of the D346G mutant of the Sapporo Virus RdRp polymerase Descriptor: RNA-DIRECTED RNA POLYMERASE Authors: Fullerton, S.W.B, Robel, I, Schuldt, L, Gebhardt, J, Tucker, P, Rohayem, J. Deposit date: 2007-03-07 Release date: 2007-05-01 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The 2.4 Angstrom Resolution Structure of the D346G Mutant of the Sapporo Virus Rdrp Polymerase To be Published
5Y3D	Structural insight into the interaction between RNA polymerase and VPg for norovirus replication Descriptor: RNA-dependent RNA polymerase, viral protein genome-linked (VPg) Authors: Kim, K.H, Lee, J.-H, Seok, J.H. Deposit date: 2017-07-28 Release date: 2018-07-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.14 Å) Cite: Insight Into the Interaction Between RNA Polymerase and VPg for Murine Norovirus Replication. Front Microbiol, 9, 2018
5TSN	Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex Descriptor: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3') Authors: Shaik, M.M, Ng, K.K. Deposit date: 2016-10-30 Release date: 2017-04-12 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences. Proteins, 85, 2017
5ZIU	Crystal structure of human Entervirus D68 RdRp Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, RdRp Authors: Wang, M.L, Zhang, Y, Chen, Y.P, Lu, D.R, Jiang, H, Chen, Y.J, Li, L, Zhang, C.H, Shi, Q.L, Su, D. Deposit date: 2018-03-17 Release date: 2019-04-17 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.147 Å) Cite: Crystal structure of human Entervirus D68 RdRp in complex with NADPH To Be Published
6QWT	Sicinivirus 3Dpol RNA dependent RNA polymerase Descriptor: Genome polyprotein Authors: Dubankova, A, Boura, E. Deposit date: 2019-03-06 Release date: 2019-10-09 Last modified: 2019-11-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structures of kobuviral and siciniviral polymerases reveal conserved mechanism of picornaviral polymerase activation. J.Struct.Biol., 208, 2019
5I61	Crystal structure of the RNA-dependent RNA polymerase of a human picorbirnavirus Descriptor: Potential RNA-dependent RNA polymerase Authors: Collier, A.M, Guo, Y.R, Tao, Y.J. Deposit date: 2016-02-15 Release date: 2016-03-16 Last modified: 2019-12-11 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA Virus. Plos Pathog., 12, 2016
6R1I	Structure of porcine Aichi virus polymerase Descriptor: Genome polyprotein Authors: Dubankova, A, Boura, E. Deposit date: 2019-03-14 Release date: 2019-10-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.634 Å) Cite: Structures of kobuviral and siciniviral polymerases reveal conserved mechanism of picornaviral polymerase activation. J.Struct.Biol., 208, 2019
5ZIT	Crystal structure of human Enterovirus D68 RdRp in complex with NADPH Descriptor: DI(HYDROXYETHYL)ETHER, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, RdRp Authors: Wang, M.L, Li, L, Chen, Y.P, Jiang, H, Zhang, Y, Su, D. Deposit date: 2018-03-17 Release date: 2019-04-17 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.196 Å) Cite: Structure of the enterovirus D68 RNA-dependent RNA polymerase in complex with NADPH implicates an inhibitor binding site in the RNA template tunnel. J.Struct.Biol., 2020
5I62	Crystal structure of the insertion loop deletion mutant of the RNA-dependent RNA polymerase of a human picorbirnavirus Descriptor: Potential RNA-dependent RNA polymerase Authors: Collier, A.M, Guo, Y.R, Tao, Y.J. Deposit date: 2016-02-15 Release date: 2016-03-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.001 Å) Cite: Initiation of RNA Polymerization and Polymerase Encapsidation by a Small dsRNA Virus. Plos Pathog., 12, 2016
6S2L	FMDV 3D polymerase crystallized in presence of (F)uridylylated VPg peptide Descriptor: GLYCEROL, Genome polyprotein Authors: Verdaguer, N, Ferrer-Orta, C. Deposit date: 2019-06-21 Release date: 2019-07-03 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.3 Å) Cite: (F)uridylylated Peptides Linked to VPg1 of Foot-and- Mouth Disease Virus (FMDV): Design, Synthesis and X-Ray Crystallography of the Complexes with FMDV RNA-Dependent RNA Polymerase. Molecules, 24, 2019
5JXS	Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus Descriptor: MAGNESIUM ION, RNA Primer, RNA Template, ... Authors: Verdaguer, N, Ferrer-Orta, C. Deposit date: 2016-05-13 Release date: 2016-06-01 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Both cis and trans Activities of Foot-and-Mouth Disease Virus 3D Polymerase Are Essential for Viral RNA Replication. J.Virol., 90, 2016
5XE0	Crystal structure of EV-D68-3Dpol in complex with GTP Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Genome polyprotein Authors: Xie, W, Wang, C, Wang, Z, Li, Q, Wang, C. Deposit date: 2017-03-30 Release date: 2017-06-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structure and Thermostability Characterization of Enterovirus D68 3Dpol J. Virol., 91, 2017
5Y6Z	Crystal structure of the coxsackievirus A16 polymerase elongation complex Descriptor: GLYCEROL, Genome polyprotein, MAGNESIUM ION, ... Authors: Bi, P, Shu, B, Gong, P. Deposit date: 2017-08-15 Release date: 2017-12-27 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of the coxsackievirus A16 RNA-dependent RNA polymerase elongation complex reveals novel features in motif A dynamics Virol Sin, 32, 2017

 

12345678910>