Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3AY8
DownloadVisualize
BU of 3ay8 by Molmil
Glutathione S-transferase unclassified 2 from Bombyx mori
分子名称: GLYCEROL, Glutathione S-transferase
著者Kakuta, Y, Usuda, K, Nakashima, T, Kimura, M, Aso, Y, Yamamoto, K.
登録日2011-05-02
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic survey of active sites of an unclassified glutathione transferase from Bombyx mori
Biochim.Biophys.Acta, 1810, 2011
7RKA
DownloadVisualize
BU of 7rka by Molmil
Crystal structure analysis of Colorado potato beetle glutathione-S transferase LdGSTu1
分子名称: GLUTATHIONE, glutathione S-transferase u1
著者Moural, T.W, Zhu, F.
登録日2021-07-22
公開日2022-07-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Characterization of One Unclassified Glutathione S-Transferase in Xenobiotic Adaptation of Leptinotarsa decemlineata.
Int J Mol Sci, 22, 2021
8A2C
DownloadVisualize
BU of 8a2c by Molmil
The crystal structure of the S178A mutant of PET40, a PETase enzyme from an unclassified Amycolatopsis
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Costanzi, E, Applegate, V, Port, A, Smits, S.H.J.
登録日2022-06-03
公開日2023-06-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The metagenome-derived esterase PET40 hydrolyses polyethylene terephthalate (PET) and is well conserved in the GC-rich gram-positives Amycolatopsis and Streptomyces
To Be Published
4MB8
DownloadVisualize
BU of 4mb8 by Molmil
Evolutionary history and metabolic insights of ancient mammalian uricases
分子名称: ACETATE ION, Uricase
著者Ortlund, E.O, Murphy, M.N.
登録日2013-08-19
公開日2014-02-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4009 Å)
主引用文献Evolutionary history and metabolic insights of ancient mammalian uricases.
Proc.Natl.Acad.Sci.USA, 111, 2014
7JJV
DownloadVisualize
BU of 7jjv by Molmil
Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice
分子名称: GrAFP antifreeze protein
著者Scholl, C.L, Tsuda, S, Graham, L.A, Davies, P.L.
登録日2020-07-27
公開日2021-01-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal waters on the nine polyproline type II helical bundle springtail antifreeze protein from Granisotoma rainieri match the ice lattice.
Febs J., 288, 2021
8KEF
DownloadVisualize
BU of 8kef by Molmil
Cyanophage A-1(L) neck/gp7-terminator
分子名称: Neck gp7, Terminator gp8
著者Yu, R.C, Li, Q, Zhou, C.Z.
登録日2023-08-11
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8KEG
DownloadVisualize
BU of 8keg by Molmil
Cyanophage A-1(L) neck/gp5-neck fiber
分子名称: Neck gp5, neck fiber gp82N
著者Yu, R.C, Li, Q, Zhou, C.Z.
登録日2023-08-11
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
5CBY
DownloadVisualize
BU of 5cby by Molmil
AncGR2 DNA Binding Domain - (+)GRE Complex
分子名称: AncGR2 DNA Binding Domain, DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*GP*AP*GP*TP*GP*TP*TP*CP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*CP*TP*CP*TP*GP*TP*TP*CP*TP*G)-3'), ...
著者Hudson, W.H, Ortlund, E.A.
登録日2015-07-01
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.997 Å)
主引用文献Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Proc.Natl.Acad.Sci.USA, 113, 2016
2W4Z
DownloadVisualize
BU of 2w4z by Molmil
Caulobacter bacteriophage 5
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, CAULOBACTER BACTERIOPHAGE 5
著者Plevka, P, Kazaks, A, Dishlers, A, Liljas, L, Tars, K.
登録日2008-12-02
公開日2009-07-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The Structure of Bacteriophage Phicb5 Reveals a Role of the RNA Genome and Metal Ions in Particle Stability and Assembly.
J.Mol.Biol., 391, 2009
2W4Y
DownloadVisualize
BU of 2w4y by Molmil
Caulobacter bacteriophage 5 - virus-like particle
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, CAULOBACTER 5 VIRUS-LIKE PARTICLE
著者Plevka, P, Kazaks, A, Dishlers, A, Liljas, L, Tars, K.
登録日2008-12-02
公開日2009-07-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Structure of Bacteriophage Phicb5 Reveals a Role of the RNA Genome and Metal Ions in Particle Stability and Assembly.
J.Mol.Biol., 391, 2009
8ERK
DownloadVisualize
BU of 8erk by Molmil
Acheta domesticus segmented densovirus, high buoyancy (HB) capsid, a mixed population of empty and immature full particles
分子名称: Acheta domesticus segmented densovirus major capsid protein
著者Penzes, J.J, McKenna, R, Tijssen, P.
登録日2022-10-12
公開日2022-11-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus.
Nat Commun, 14, 2023
8ER8
DownloadVisualize
BU of 8er8 by Molmil
Acheta domesticus segmented densovirus, mature virion capsid structure
分子名称: Acheta domesticus segmented densovirus major capsid protein, DNA (5'-D(P*AP*AP*TP*AP*A)-3')
著者Penzes, J.J, McKenna, R, Tijssen, P.
登録日2022-10-11
公開日2022-11-09
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Bipartite genome and structural organization of the parvovirus Acheta domesticus segmented densovirus.
Nat Commun, 14, 2023
7VPA
DownloadVisualize
BU of 7vpa by Molmil
Crystal structure of Ple629 from marine microbial consortium
分子名称: hydrolase Ple629
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-15
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium.
Front Bioeng Biotechnol, 10, 2022
7VMD
DownloadVisualize
BU of 7vmd by Molmil
Crystal structure of a hydrolases Ple628 from marine microbial consortium
分子名称: CALCIUM ION, hydrolase Ple628
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-08
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium.
Front Bioeng Biotechnol, 10, 2022
7VPB
DownloadVisualize
BU of 7vpb by Molmil
Crystal structure of a novel hydrolase in apo form
分子名称: 4-(2-hydroxyethylcarbamoyl)benzoic acid, ACETATE ION, plastic degrading hydrolase Ple629
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural insight and engineering of a plastic degrading hydrolase Ple629.
Biochem.Biophys.Res.Commun., 626, 2022
7VME
DownloadVisualize
BU of 7vme by Molmil
Crystal structure of a hydrolase in apo form 2
分子名称: CALCIUM ION, hydrolase
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-08
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of a hydrolase in apo form 2
to be published
8HXJ
DownloadVisualize
BU of 8hxj by Molmil
BANAL-20-52 Spike trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, X, Xu, G.
登録日2023-01-04
公開日2024-01-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity
To Be Published
8I3W
DownloadVisualize
BU of 8i3w by Molmil
BANAL-20-236 Spike trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, X, Xu, G.
登録日2023-01-18
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献The selective effect of fecal-oral transmission on the S proteins of bat SARS-CoV-2 related coronaviruses in favor of stability over infectivity
To Be Published
7TVL
DownloadVisualize
BU of 7tvl by Molmil
Viral AMG chitosanase V-Csn, apo structure
分子名称: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVN
DownloadVisualize
BU of 7tvn by Molmil
Viral AMG chitosanase V-Csn, D148N mutant
分子名称: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn D148N mutant
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVO
DownloadVisualize
BU of 7tvo by Molmil
Viral AMG chitosanase V-Csn, E157Q mutant
分子名称: GLYCEROL, SULFATE ION, Viral chitosanase V-Csn E157Q mutant
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVP
DownloadVisualize
BU of 7tvp by Molmil
Viral AMG chitosanase V-Csn, E157Q mutant, chitotriose complex
分子名称: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, GLYCEROL, Viral chitosanase V-Csn E157Q mutant chitotriose complex
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVM
DownloadVisualize
BU of 7tvm by Molmil
Viral AMG chitosanase V-Csn, apo structure, crystal form 2
分子名称: 1,2-ETHANEDIOL, Viral chitosanase V-Csn
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
8KEE
DownloadVisualize
BU of 8kee by Molmil
Cyanophage A-1(L) sheath-tube
分子名称: sheath, tube
著者Yu, R.C, Li, Q, Zhou, C.Z.
登録日2023-08-11
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024
8KEA
DownloadVisualize
BU of 8kea by Molmil
Cyanophage A-1(L) baseplate-initiators
分子名称: baseplate gp16, central spike, hub, ...
著者Yu, R.C, Li, Q, Zhou, C.Z.
登録日2023-08-11
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Structure of the intact tail machine of Anabaena myophage A-1(L).
Nat Commun, 15, 2024

 

123>

218500

件を2024-04-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon