PDB: 100 件ウェブページステータス検索Chemie searchBIRD

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1DL6	SOLUTION STRUCTURE OF HUMAN TFIIB N-TERMINAL DOMAIN 分子名称: TRANSCRIPTION FACTOR II B (TFIIB), ZINC ION 著者 Chen, H.-T, Legault, P, Glushka, J, Omichinski, J.G, Scott, R.A. 登録日 1999-12-08 公開日 2000-10-18 最終更新日 2022-02-16 実験手法 SOLUTION NMR 主引用文献 Structure of a (Cys3His) zinc ribbon, a ubiquitous motif in archaeal and eucaryal transcription. Protein Sci., 9, 2000
1VD4	Solution structure of the zinc finger domain of TFIIE alpha 分子名称: Transcription initiation factor IIE, alpha subunit, ZINC ION 著者 Okuda, M, Tanaka, A, Arai, Y, Satoh, M, Okamura, H, Nagadoi, A, Hanaoka, F, Ohkuma, Y, Nishimura, Y. 登録日 2004-03-18 公開日 2004-10-05 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 A novel zinc finger structure in the large subunit of human general transcription factor TFIIE. J.Biol.Chem., 279, 2004
3WWL	Crystal structure of lysine biosynthetic amino acid carrier protein LysW from Thermus thermophilus conjugated with alpha-aminoadipate 分子名称: Alpha-aminoadipate carrier protein LysW, ZINC ION 著者 Yoshida, A, Tomita, T, Kuzuyama, T, Nishiyama, M. 登録日 2014-06-21 公開日 2014-11-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structural insight into amino group-carrier protein-mediated lysine biosynthesis: crystal structure of the LysZ·LysW complex from Thermus thermophilus. J.Biol.Chem., 290, 2015
1PFT	N-TERMINAL DOMAIN OF TFIIB, NMR 分子名称: TFIIB, ZINC ION 著者 Zhu, W, Zeng, Q, Colangelo, C.M, Lewis, L.M, Summers, M.F, Scott, R.A. 登録日 1996-03-27 公開日 1996-08-17 最終更新日 2017-11-29 実験手法 SOLUTION NMR 主引用文献 The N-terminal domain of TFIIB from Pyrococcus furiosus forms a zinc ribbon. Nat.Struct.Biol., 3, 1996
1RO4	RDC-derived models of the zinc ribbon domain of human general transcription factor TFIIB (zinc free structures) 分子名称: Transcription initiation factor IIB 著者 Ghosh, M, Ikura, M. 登録日 2003-12-01 公開日 2004-05-25 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB. Biochem.J., 378, 2004
1RLY	RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc bound structures) 分子名称: Transcription initiation factor IIB, ZINC ION 著者 Ghosh, M, Ikura, M. 登録日 2003-11-26 公開日 2004-05-25 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Probing Zn2+-binding effects on the zinc-ribbon domain of human general transcription factor TFIIB. Biochem.J., 378, 2004
7Q5B	Cryo-EM structure of Ty3 retrotransposon targeting a TFIIIB-bound tRNA gene 分子名称: DNA (19-MER), DNA (31-MER), DNA (34-MER), ... 著者 Abascal-Palacios, G, Jochem, L, Pla-Prats, C, Beuron, F, Vannini, A. 登録日 2021-11-03 公開日 2022-01-26 実験手法 ELECTRON MICROSCOPY (3.98 Å) 主引用文献 Structural basis of Ty3 retrotransposon integration at RNA Polymerase III-transcribed genes. Nat Commun, 12, 2021
5SVA	Mediator-RNA Polymerase II Pre-Initiation Complex 分子名称: 108bp HIS4 Promoter Non-template Strand (-92/+16), 108bp HIS4 Promoter Template Strand (+16/-92), DNA repair helicase RAD25, ... 著者 Robinson, P.J, Bushnell, D.A, Kornberg, R.D. 登録日 2016-08-05 公開日 2016-09-28 最終更新日 2019-11-27 実験手法 ELECTRON MICROSCOPY (15.3 Å) 主引用文献 Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex. Cell, 166, 2016
6O9L	Human holo-PIC in the closed state 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I. 登録日 2019-03-14 公開日 2019-05-29 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.2 Å) 主引用文献 Transcription preinitiation complex structure and dynamics provide insight into genetic diseases. Nat.Struct.Mol.Biol., 26, 2019
7LBM	Structure of the human Mediator-bound transcription pre-initiation complex 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Abdella, R, Talyzina, A, He, Y. 登録日 2021-01-08 公開日 2021-03-24 最終更新日 2021-04-14 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structure of the human Mediator-bound transcription preinitiation complex. Science, 372, 2021
4V1N	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2019-04-10 実験手法 ELECTRON MICROSCOPY (7.8 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
4V1O	Architecture of the RNA polymerase II-Mediator core transcription initiation complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P. 登録日 2014-09-29 公開日 2015-02-04 最終更新日 2017-08-30 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Architecture of the RNA Polymerase II-Mediator Core Initiation Complex. Nature, 518, 2015
5OQM	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P. 登録日 2017-08-13 公開日 2018-05-09 最終更新日 2018-11-21 実験手法 ELECTRON MICROSCOPY (5.8 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
5OQJ	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH 分子名称: DNA repair helicase RAD25, DNA repair helicase RAD3, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Henning, U, Cramer, P. 登録日 2017-08-11 公開日 2018-04-25 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Structures of transcription pre-initiation complex with TFIIH and Mediator. Nature, 551, 2017
4BBS	Structure of an initially transcribing RNA polymerase II-TFIIB complex 分子名称: 5'-D(*AP*GP*CP*GP*CP*AP*GP*TP*TP*GP*TP*GP*CP*TP *AP*TP*GP*AP*TP*AP*TP*TP*TP*TP*TP*AP*TP)-3', 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*CP*TP)-3', 5'-R(*AP*UP*AP*UP*CP*AP)-3', ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2013-01-30 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
4BBR	Structure of RNA polymerase II-TFIIB complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2019-11-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
3K7A	Crystal Structure of an RNA polymerase II-TFIIB complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Liu, X, Bushnell, D.A, Wang, D, Calero, G, Kornberg, R.D. 登録日 2009-10-12 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism. Science, 327, 2010
3K1F	Crystal structure of RNA Polymerase II in complex with TFIIB 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Kostrewa, D, Zeller, M.E, Armache, K.-J, Seizl, M, Leike, K, Thomm, M, Cramer, P. 登録日 2009-09-27 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature, 462, 2009
6CND	Yeast RNA polymerase III natural open complex (nOC) 分子名称: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Han, Y, He, Y. 登録日 2018-03-08 公開日 2018-08-22 最終更新日 2020-01-08 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Structural visualization of RNA polymerase III transcription machineries. Cell Discov, 4, 2018
6CNB	Yeast RNA polymerase III initial transcribing complex 分子名称: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Han, Y, He, Y. 登録日 2018-03-08 公開日 2018-08-22 最終更新日 2020-01-08 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structural visualization of RNA polymerase III transcription machineries. Cell Discov, 4, 2018
8IUE	RNA polymerase III pre-initiation complex melting complex 1 分子名称: DNA (74-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y. 登録日 2023-03-24 公開日 2023-05-24 最終更新日 2023-07-12 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Structure of the SNAPc-bound RNA polymerase III preinitiation complex. Cell Res., 33, 2023
8IUH	RNA polymerase III pre-initiation complex open complex 1 分子名称: DNA (81-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y. 登録日 2023-03-24 公開日 2023-05-24 最終更新日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of the SNAPc-bound RNA polymerase III preinitiation complex. Cell Res., 33, 2023
8ITY	human RNA polymerase III pre-initiation complex closed DNA 1 分子名称: DNA (82-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... 著者 Hou, H, Jin, Q, Ren, Y, Wang, Q, Xu, Y. 登録日 2023-03-23 公開日 2023-06-07 最終更新日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structure of the SNAPc-bound RNA polymerase III preinitiation complex. Cell Res., 33, 2023
8FFZ	TFIIIA-TFIIIC-Brf1-TBP complex bound to 5S rRNA gene 分子名称: DNA (151-MER), Transcription factor IIIA, Transcription factor IIIB 70 kDa subunit,TATA-box-binding protein, ... 著者 Talyzina, A, He, Y. 登録日 2022-12-11 公開日 2023-06-21 最終更新日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of TFIIIC-dependent RNA polymerase III transcription initiation. Mol.Cell, 83, 2023
8GXQ	PIC-Mediator in complex with +1 nucleosome (T40N) in MH-binding state 分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... 著者 Chen, X, Wang, X, Liu, W, Ren, Y, Qu, X, Li, J, Yin, X, Xu, Y. 登録日 2022-09-21 公開日 2022-11-02 実験手法 ELECTRON MICROSCOPY (5.04 Å) 主引用文献 Structures of +1 nucleosome-bound PIC-Mediator complex. Science, 378, 2022

 

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