PDB: 544 件ウェブページステータス検索Chemie searchBIRD

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5ZL1	Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1 分子名称: CALCIUM ION, COPPER (II) ION, Putative copper-type nitrite reductase, ... 著者 Hira, D, Matsumura, M, Kitamura, R, Fujii, T. 登録日 2018-03-26 公開日 2019-04-10 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1 To Be Published
4KNS	Reduced crystal structure of the Nitrosomonas europaea copper nitrite reductase at pH 6.5 分子名称: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ... 著者 Rosenzweig, A.C, Lawton, T.L, Sayavedra-Soto, L.A, Arp, D.J. 登録日 2013-05-10 公開日 2013-07-24 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem., 288, 2013
4KNT	Copper nitrite reductase from Nitrosomonas europaea pH 8.5 分子名称: COPPER (II) ION, GLYCEROL, Multicopper oxidase type 1 著者 Rosenzweig, A.C, Lawton, T.L, Sayavedra-Soto, L.A, Arp, D.J. 登録日 2013-05-10 公開日 2013-07-24 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem., 288, 2013
4KNU	Copper nitrite reductase from Nitrosomonas europaea at pH 6.5 分子名称: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ... 著者 Rosenzweig, A.C, Lawton, T.L, Sayavedra-Soto, L.A, Arp, D.J. 登録日 2013-05-10 公開日 2013-07-24 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Characterization of a nitrite reductase involved in nitrifier denitrification. J.Biol.Chem., 288, 2013
2DV6	Crystal structure of nitrite reductase from Hyphomicrobium denitrificans 分子名称: COPPER (II) ION, Nitrite reductase, POTASSIUM ION 著者 Nojiri, M, Xie, Y, Yamamoto, T, Inoue, T, Suzuki, S, Kai, Y. 登録日 2006-07-28 公開日 2007-02-20 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure and function of a hexameric copper-containing nitrite reductase. Proc.Natl.Acad.Sci.USA, 104, 2007
1KBV	NITRITE-SOAKED CRYSTAL STRUCTURE OF THE SOLUBLE DOMAIN OF ANIA FROM NEISSERIA GONORRHOEAE 分子名称: COPPER (II) ION, Major outer membrane protein PAN 1, NITRITE ION 著者 Boulanger, M.J, Murphy, M.E.P. 登録日 2001-11-06 公開日 2001-12-05 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of the soluble domain of the major anaerobically induced outer membrane protein (AniA) from pathogenic Neisseria: a new class of copper-containing nitrite reductases. J.Mol.Biol., 315, 2002
1KBW	CRYSTAL STRUCTURE OF THE SOLUBLE DOMAIN OF ANIA FROM NEISSERIA GONORRHOEAE 分子名称: COPPER (II) ION, Major outer membrane protein PAN 1 著者 Boulanger, M.J, Murphy, M.E.P. 登録日 2001-11-06 公開日 2001-12-05 最終更新日 2022-12-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the soluble domain of the major anaerobically induced outer membrane protein (AniA) from pathogenic Neisseria: a new class of copper-containing nitrite reductases. J.Mol.Biol., 315, 2002
6QPU	Crystal structure of as isolated synthetic core domain of nitrite reductase from Ralstonia pickettii (residues 1-331) 分子名称: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ... 著者 Antonyuk, S.V, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S. 登録日 2019-02-15 公開日 2019-11-06 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis. Acs Catalysis, 9, 2019
6QPT	Crystal structure of nitrite bound synthetic core domain of nitrite reductase from Ralstonia pickettii (residues 1-331) 分子名称: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION, ... 著者 Antonyuk, S.V, Hedison, T.M, Eady, R.R, Hasnain, S.S, Scrutton, N.S. 登録日 2019-02-15 公開日 2019-11-06 最終更新日 2020-02-26 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Unexpected Roles of a Tether Harboring a Tyrosine Gatekeeper Residue in Modular Nitrite Reductase Catalysis. Acs Catalysis, 9, 2019
6THE	Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from Bradyrhizobium sp. ORS 375 分子名称: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ... 著者 Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S. 登録日 2019-11-20 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction. Febs J., 288, 2021
5TB7	Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group P212121 分子名称: COPPER (II) ION, Nitrite reductase, PHOSPHATE ION 著者 Hamza, A, Williamson, Z.A, Reed, R.W, Sikora, A.E, Korotkov, K.V. 登録日 2016-09-11 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA. Antimicrob. Agents Chemother., 61, 2017
4WTQ	Structure of the Ssl1 laccase mutant M295L 分子名称: COPPER (II) ION, Copper oxidase, GLYCEROL, ... 著者 Gunne, M, Hoeppner, A, Urlacher, V.B. 登録日 2014-10-30 公開日 2015-12-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the Ssl1 laccase mutant M295L To Be Published
4X4K	Structure of laccase from Botrytis aclada with full copper content 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Laccase, ... 著者 Osipov, E.M, Polyakov, K.M, Tikhonova, T.V, Kittl, R, Shleev, S.V, Ludwig, R, Popov, V.O. 登録日 2014-12-03 公開日 2015-12-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Incorporation of copper ions into crystals of T2 copper-depleted laccase from Botrytis aclada. Acta Crystallogr.,Sect.F, 71, 2015
8FDG	Cryo-EM structure of coagulation factor V short 分子名称: Coagulation factor V 著者 Mohammed, B.M, Pelc, L.A, Rau, M.J, Di Cera, E. 登録日 2022-12-03 公開日 2023-03-15 最終更新日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of coagulation factor V short. Blood, 141, 2023
7TPP	Cryo-em structure of human prothrombin:prothrombinase at 4.1 Angstrom resolution 分子名称: Activated factor Xa heavy chain, Coagulation factor Va, Factor X light chain, ... 著者 Di Cera, E, Ruben, E.A. 登録日 2022-01-25 公開日 2022-05-04 最終更新日 2022-06-29 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Cryo-EM structure of the prothrombin-prothrombinase complex. Blood, 139, 2022
7TPQ	Cryo-em structure of human prothrombinase on a nanodisc at 5.3 Angstrom resolution 分子名称: Activated factor Xa heavy chain, Coagulation factor Va, Factor X light chain 著者 Di Cera, E, Ruben, E.A. 登録日 2022-01-25 公開日 2022-05-04 最終更新日 2022-06-29 実験手法 ELECTRON MICROSCOPY (5.3 Å) 主引用文献 Cryo-EM structure of the prothrombin-prothrombinase complex. Blood, 139, 2022
8G6I	Coagulation factor VIII bound to a patient-derived anti-C1 domain antibody inhibitor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor VIII chimera from human and pig, NB33 heavy chain, ... 著者 Childers, K.C, Davulcu, O, Haynes, R.M, Lollar, P, Doering, C.B, Coxon, C.H, Spiegel, P.C. 登録日 2023-02-15 公開日 2023-05-24 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (4.23 Å) 主引用文献 Structure of coagulation factor VIII bound to a patient-derived anti-C1 domain antibody inhibitor. Blood, 142, 2023
5UE6	Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group I4122 分子名称: COPPER (II) ION, Nitrite reductase, SODIUM ION 著者 Hamza, A, Williamson, Z.A, Reed, R.W, Sikora, A.E, Korotkov, K.V. 登録日 2016-12-29 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA. Antimicrob. Agents Chemother., 61, 2017
4UAH	Structure of the Ssl1 laccase mutant H99N with depleted type-2 copper ion 分子名称: COPPER (II) ION, Copper oxidase, GLYCEROL 著者 Gunne, M, Hoeppner, A, Jaeger, V.D, Urlacher, V.B. 登録日 2014-08-09 公開日 2015-08-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structure of the Ssl1 laccase mutant H99N with depleted type-2 copper ion To Be Published
4UAN	Structure of the Ssl1 laccase mutant H99Q with depleted type-2 copper ion 分子名称: COPPER (II) ION, Copper oxidase, GLYCEROL 著者 Gunne, M, Hoeppner, A, Jaeger, V.D, Urlacher, V.B. 登録日 2014-08-11 公開日 2015-08-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of the Ssl1 laccase mutant H99Q with depleted type-2 copper ion To Be Published
4W1T	Structure of the Ssl1 laccase mutant H99Y with depleted type-2 copper ion 分子名称: COPPER (II) ION, Copper oxidase, GLYCEROL 著者 Gunne, M, Hoeppner, A, Jaeger, V.D, Urlacher, V.B. 登録日 2014-08-14 公開日 2015-08-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure of the Ssl1 laccase mutant H99Y with depleted type-2 copper ion To Be Published
5YTL	Crystal structure of Geobacillus thermodenitrificans copper-containing nitrite reductase determined with an anaerobically manipulated crystal 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, ... 著者 Fukuda, Y, Matsusaki, T, Tse, K.M, Mizohata, E, Murphy, M.E.P, Inoue, T. 登録日 2017-11-19 公開日 2018-08-22 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.401 Å) 主引用文献 Crystallographic study of dioxygen chemistry in a copper-containing nitrite reductase from Geobacillus thermodenitrificans. Acta Crystallogr D Struct Biol, 74, 2018
5YTN	C135A mutant of copper-containing nitrite reductase from Geobacillus thermodenitrificans in complex with peroxide 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, COPPER (II) ION, Copper-containing nitrite reductase, ... 著者 Fukuda, Y, Matsusaki, T, Tse, K.M, Mizohata, E, Murphy, M.E.P, Inoue, T. 登録日 2017-11-19 公開日 2018-08-22 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystallographic study of dioxygen chemistry in a copper-containing nitrite reductase from Geobacillus thermodenitrificans. Acta Crystallogr D Struct Biol, 74, 2018
3H4H	Met94Thr/Phe312Cys variant of nitrite reductase from Alcaligenes faecalis 分子名称: COPPER (II) ION, Copper-containing nitrite reductase 著者 MacPherson, I.S, Murphy, I.S. 登録日 2009-04-20 公開日 2010-02-02 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Directed evolution of copper nitrite reductase to a chromogenic reductant. Protein Eng.Des.Sel., 23, 2010
7B2K	Structure of the M298F mutant of the Streptomyces coelicolor small laccase T1 copper axial ligand. 分子名称: COPPER (II) ION, Putative copper oxidase 著者 Zovo, K, Majumdar, S, Lukk, T. 登録日 2020-11-27 公開日 2022-02-09 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Substitution of the Methionine Axial Ligand of the T1 Copper for the Fungal-like Phenylalanine Ligand (M298F) Causes Local Structural Perturbations that Lead to Thermal Instability and Reduced Catalytic Efficiency of the Small Laccase from Streptomyces coelicolor A3(2). Acs Omega, 7, 2022

 

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