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1ZCC
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Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58
分子名称: ACETATE ION, SULFATE ION, glycerophosphodiester phosphodiesterase
著者Krishnamurthy, N.R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-04-11
公開日2005-05-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit.
Proteins, 65, 2006
1O1Z
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Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) (TM1621) from Thermotoga maritima at 1.60 A resolution
分子名称: SODIUM ION, glycerophosphodiester phosphodiesterase
著者Joint Center for Structural Genomics (JCSG)
登録日2003-02-12
公開日2003-04-01
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Proteins, 56, 2004
4R7O
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Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterasefrom Bacillus anthraci
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Kim, Y, Zhou, M, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-08-28
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.534 Å)
主引用文献Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterasefrom Bacillus anthraci
To be Published
8CWP
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BU of 8cwp by Molmil
X-ray crystal structure of NTHi Protein D bound to a putative glycerol moiety
分子名称: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION
著者Jones, S.P, Cook, K.H, Holmquist, M.L, Almekinder, L, DeLaney, A, Labbe, N, Perdue, J, Jackson, N, Charles, R, Pichichero, M, Kaur, R, Michel, L, Gleghorn, M.L.
登録日2022-05-19
公開日2022-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Vaccine target and carrier molecule nontypeable Haemophilus influenzae protein D dimerizes like the close Escherichia coli GlpQ homolog but unlike other known homolog dimers.
Proteins, 91, 2023
4OEC
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Crystal structure of glycerophosphodiester phosphodiesterase from Thermococcus kodakarensis KOD1
分子名称: Glycerophosphoryl diester phosphodiesterase, MAGNESIUM ION
著者Atsuta, Y, You, D.J, Takano, K, Koga, Y, Kanaya, S.
登録日2014-01-13
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of glycerophosphodiester phosphodiesterase from Thermococcus kodakarensis KOD1
To be Published
3MZ2
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BU of 3mz2 by Molmil
Crystal structure of a Glycerophosphoryl diester phosphodiesterase (BDI_3922) from Parabacteroides distasonis ATCC 8503 at 1.55 A resolution
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-05-11
公開日2010-07-07
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of a Glycerophosphoryl diester phosphodiesterase (BDI_3922) from Parabacteroides distasonis ATCC 8503 at 1.55 A resolution
To be published
8GHI
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Crystal structure of Staphylococcus aureus Lysophosphatidylglycerol phospholipase D
分子名称: DIHYDROGENPHOSPHATE ION, GLYCEROL, Glycerophosphodiester phosphodiesterase
著者Rock, C.O, Yun, M.
登録日2023-03-10
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Lysophosphatidylglycerol (LPG) phospholipase D maintains membrane homeostasis in Staphylococcus aureus by converting LPG to lysophosphatidic acid.
J.Biol.Chem., 299, 2023
8GHH
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Crystal structure of Staphylococcus aureus Lysophosphatidylglycerol phospholipase D
分子名称: CHLORIDE ION, DIHYDROGENPHOSPHATE ION, GLYCEROL, ...
著者Rock, C.O, Yun, M.
登録日2023-03-10
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Lysophosphatidylglycerol (LPG) phospholipase D maintains membrane homeostasis in Staphylococcus aureus by converting LPG to lysophosphatidic acid.
J.Biol.Chem., 299, 2023
3NO3
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BU of 3no3 by Molmil
Crystal structure of a glycerophosphodiester phosphodiesterase (BDI_0402) from Parabacteroides distasonis ATCC 8503 at 1.89 A resolution
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2010-06-24
公開日2010-07-28
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of a glycerophosphodiester phosphodiesterase (BDI_0402) from Parabacteroides distasonis ATCC 8503 at 1.89 A resolution
To be published
7E0V
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BU of 7e0v by Molmil
GDPD from Pyrococcus furiosus DSM 3638
分子名称: Glycerophosphodiester phosphodiesterase
著者Wang, Y.H, Wang, J, Wang, F.H.
登録日2021-01-28
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of Bomgl, a monoacylglycerol lipase from marine Bacillus
To Be Published
7E2A
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GDPD mutant from Pyrococcus furiosus DSM 3638
分子名称: Glycerophosphodiester phosphodiesterase
著者Wang, Y.H, Wang, J, Wang, F.H.
登録日2021-02-05
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structure of glycerophoshphodiester phospodiesterase D60A mutant from Pyrococcus furiosus DSM
To Be Published
7E2B
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BU of 7e2b by Molmil
GDPD mutant complex from Pyrococcus furiosus DSM 3638
分子名称: CHOLINE ION, Glycerophosphodiester phosphodiesterase, MAGNESIUM ION, ...
著者Wang, Y.H, Wang, J, Wang, F.H.
登録日2021-02-05
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Observation of the GPC production during hydrolysis of LPC by GDPD D60A from Pyrococcus furiosus DSM 3638
To Be Published
1T8Q
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BU of 1t8q by Molmil
Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
分子名称: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, periplasmic, ...
著者Zhang, R, Kim, Y, Dementieva, I, Duke, N, Stols, L, Donnelly, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-05-13
公開日2004-08-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
To be Published
5T9C
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BU of 5t9c by Molmil
Crystal structure of B. subtilis 168 GlpQ in complex with glycerol-3-phosphate (1 hour soak)
分子名称: CALCIUM ION, Glycerophosphoryl diester phosphodiesterase, PHOSPHATE ION, ...
著者Li, F.K.K, Strynadka, N.C.J.
登録日2016-09-09
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5T9B
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BU of 5t9b by Molmil
Crystal structure of B. subtilis 168 GlpQ in complex with glycerol-3-phosphate (5 minute soak)
分子名称: CALCIUM ION, Glycerophosphoryl diester phosphodiesterase, SN-GLYCEROL-3-PHOSPHATE, ...
著者Li, F.K.K, Strynadka, N.C.J.
登録日2016-09-09
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5T91
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Crystal structure of B. subtilis 168 GlpQ in complex with bicine
分子名称: BICINE, CALCIUM ION, Glycerophosphoryl diester phosphodiesterase, ...
著者Li, F.K.K, Strynadka, N.C.J.
登録日2016-09-09
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
1V8E
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BU of 1v8e by Molmil
Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Thermus thermophilus HB8
分子名称: putative glycerophosphoryl diester phosphodiesterase
著者Ishijima, J, Ida, K, Yutani, K, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-05
公開日2005-01-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of glycerophosphoryl diester phosphodiesterase from Thermus thermophilus HB8
To be Published
2OOG
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BU of 2oog by Molmil
Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus
分子名称: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SULFATE ION, ...
著者Patskovsky, Y, Fedorov, E, Toro, R, Sauder, J.M, Smith, D, Freeman, J, Maletic, M, Powell, A, Gheyi, T, Wasserman, S.R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Staphylococcus Aureus
To be Published
1VD6
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
分子名称: GLYCEROL, Glycerophosphoryl Diester Phosphodiesterase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-18
公開日2005-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
To be Published
2OTD
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BU of 2otd by Molmil
The crystal structure of the glycerophosphodiester phosphodiesterase from Shigella flexneri 2a
分子名称: Glycerophosphodiester phosphodiesterase, PHOSPHATE ION
著者Zhang, R, Wu, R, Clancy, S, Jiang, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-02-07
公開日2007-03-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of the glycerophosphodiester phosphodiesterase from Shigella flexneri 2a
To be Published
2P76
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Crystal structure of a Glycerophosphodiester Phosphodiesterase from Staphylococcus aureus
分子名称: GLYCEROL, Glycerophosphoryl diester phosphodiesterase, SODIUM ION
著者Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-03-20
公開日2007-04-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of a Glycerophosphodiester Phosphodiesterase from Staphylococcus aureus
To be Published
5VUG
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase Domain of Uncharacterized Protein Rv2277c from Mycobacterium tuberculosis
分子名称: CALCIUM ION, GLYCEROL, Uncharacterized protein Rv2277c
著者Kim, Y, Li, H, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2017-05-19
公開日2017-06-14
最終更新日2017-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase Domain of Uncharacterized Protein Rv2277c from Mycobacterium tuberculosis
To Be Published
2PZ0
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Crystal structure of Glycerophosphodiester Phosphodiesterase (GDPD) from T. tengcongensis
分子名称: CALCIUM ION, GLYCEROL, Glycerophosphoryl diester phosphodiesterase
著者Shi, L, Liu, J.F, An, X.M, Liang, D.C.
登録日2007-05-17
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) from Thermoanaerobacter tengcongensis, a metal ion-dependent enzyme: insight into the catalytic mechanism.
Proteins, 72, 2008
3KS6
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Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution
分子名称: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-11-20
公開日2009-12-08
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution
To be published
3L12
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Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (YP_165505.1) from Silicibacter pomeroyi DSS-3 at 1.60 A resolution
分子名称: CHLORIDE ION, MAGNESIUM ION, Putative Glycerophosphoryl diester phosphodiesterase, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-12-10
公開日2009-12-29
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (YP_165505.1) from Silicibacter pomeroyi DSS-3 at 1.60 A resolution
To be published

 

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