PDB: 18 件ウェブページステータス検索Chemie searchBIRD

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1CZD	CRYSTAL STRUCTURE OF THE PROCESSIVITY CLAMP GP45 FROM BACTERIOPHAGE T4 分子名称: DNA POLYMERASE ACCESSORY PROTEIN G45 著者 Moarefi, I, Jeruzalmi, D, Turner, J, O'Donnell, M, Kuriyan, J. 登録日 1999-09-02 公開日 2000-03-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage. J.Mol.Biol., 296, 2000
7D7D	CryoEM structure of gp45-dependent transcription activation complex 分子名称: DNA (nontemplate strand), DNA (template strand), DNA polymerase clamp, ... 著者 Shi, J, Wen, A, Jin, S, Feng, Y. 登録日 2020-10-03 公開日 2021-01-20 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Transcription activation by a sliding clamp. Nat Commun, 12, 2021
4DE8	LytR-Cps2a-Psr family protein with bound octaprenyl monophosphate lipid 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl dihydrogen phosphate, Cps2A, DI(HYDROXYETHYL)ETHER 著者 Eberhardt, A, Hoyland, C.N, Vollmer, D.V, Bisle, S, Cleverley, R.M, Johnsborg, O, Havarstein, L.S, Lewis, R.J, Vollmer, W. 登録日 2012-01-20 公開日 2012-04-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Attachment of Capsular Polysaccharide to the Cell Wall in Streptococcus pneumoniae. Microb Drug Resist, 18, 2012
6DRT	Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4 分子名称: 1,2-ETHANEDIOL, DNA polymerase clamp, GP45 recognition loop 著者 Shi, K, Aihara, H. 登録日 2018-06-13 公開日 2018-09-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.117 Å) 主引用文献 T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction. Nucleic Acids Res., 46, 2018
1B8H	SLIDING CLAMP, DNA POLYMERASE 分子名称: DNA POLYMERASE PROCESSIVITY COMPONENT, DNA POLYMERASE fragment 著者 Shamoo, Y, Steitz, T.A. 登録日 1999-02-01 公開日 1999-02-09 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex. Cell(Cambridge,Mass.), 99, 1999
1B77	BUILDING A REPLISOME STRUCTURE FROM INTERACTING PIECES: A SLIDING CLAMP COMPLEXED WITH AN INTERACTION PEPTIDE FROM DNA POLYMERASE 分子名称: PROTEIN (SLIDING CLAMP) 著者 Shamoo, Y, Steitz, T.A. 登録日 1999-01-27 公開日 1999-02-08 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Building a replisome from interacting pieces: sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex. Cell(Cambridge,Mass.), 99, 1999
2XXQ	A widespread family of bacterial cell wall assembly proteins 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, ACETATE ION, ... 著者 Marles-Wright, J, Kawai, Y, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Cleverley, R.M, Bui, N.K, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2010-11-11 公開日 2011-10-19 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 A Widespread Family of Bacterial Cell Wall Assembly Proteins. Embo J., 30, 2011
2XXP	A widespread family of bacterial cell wall assembly proteins 分子名称: CPS2A, DI(HYDROXYETHYL)ETHER, MONO-TRANS, ... 著者 Marles-Wright, J, Kawai, Y, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Cleverley, R.M, Bui, N.K, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2010-11-11 公開日 2011-10-19 最終更新日 2014-01-15 実験手法 X-RAY DIFFRACTION (1.692 Å) 主引用文献 A Widespread Family of Bacterial Cell Wall Assembly Proteins. Embo J., 30, 2011
3TFL	LytR-Cps2a-Psr family protein with bound octaprenyl pyrophosphate lipid 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, CPS2A, ... 著者 Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2011-08-16 公開日 2011-10-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 A widespread family of bacterial cell wall assembly proteins. Embo J., 30, 2011
3TEP	LytR-CPS2a-Psr family protein with bound octaprenyl pyrophosphate lipid and magnesium ion 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, CPS2A, ... 著者 Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2011-08-15 公開日 2011-10-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 A widespread family of bacterial cell wall assembly proteins. Embo J., 30, 2011
3TEL	LytR-CPS2A-Psr family protein with bound octaprenyl pyrophosphate lipid and manganese ion 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, ACETATE ION, ... 著者 Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2011-08-15 公開日 2011-10-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A widespread family of bacterial cell wall assembly proteins. Embo J., 30, 2011
8UH7	Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Primer DNA strand, ... 著者 Gee, C.L, Marcus, K, Kelch, B.A, Makino, D.L. 登録日 2023-10-07 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.628 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UNH	Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp 分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Sliding clamp, ... 著者 Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J. 登録日 2023-10-19 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UNF	Cryo-EM structure of T4 Bacteriophage Clamp Loader with Sliding Clamp and DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Sliding clamp, ... 著者 Huang, Y, Marcus, K, Subramanian, S, Gee, L.C, Gorday, K, Ghaffari-Kashani, S, Luo, X, Zhang, L, O'Donnell, M, Subramanian, S, Kuriyan, J. 登録日 2023-10-18 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
8UK9	Structure of T4 Bacteriophage clamp loader mutant D110C bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, DNA primer, ... 著者 Marcus, K, Ghaffari-Kashani, S, Gee, C.L. 登録日 2023-10-12 公開日 2023-12-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Autoinhibition of a clamp-loader ATPase revealed by deep mutagenesis and cryo-EM. Nat.Struct.Mol.Biol., 31, 2024
3U5Z	Structure of T4 Bacteriophage clamp loader bound to the T4 clamp, primer-template DNA, and ATP analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
3U60	Structure of T4 Bacteriophage Clamp Loader Bound To Open Clamp, DNA and ATP Analog 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011
3U61	Structure of T4 Bacteriophage Clamp Loader Bound To Closed Clamp, DNA and ATP Analog and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA polymerase accessory protein 44, DNA polymerase accessory protein 62, ... 著者 Kelch, B.A, Makino, D.L, O'Donnell, M, Kuriyan, J. 登録日 2011-10-11 公開日 2012-01-04 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 How a DNA polymerase clamp loader opens a sliding clamp. Science, 334, 2011