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5OS9
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Structure of the B3 DNA-Binding Domain of NGA1
分子名称: B3 domain-containing transcription factor NGA1
著者Sasnauskas, G, Manakova, E.
登録日2017-08-17
公開日2018-09-05
最終更新日2018-11-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献DNA recognition by Arabidopsis transcription factors ABI3 and NGA1.
FEBS J., 285, 2018
7ET6
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BU of 7et6 by Molmil
Crystal structure of Arabidopsis TEM1 B3-DNA complex
分子名称: AP2/ERF and B3 domain-containing transcription repressor TEM1, FT-RY14-F, FT-RY14-R
著者Hu, H, Du, J.
登録日2021-05-12
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献TEM1 combinatorially binds to FLOWERING LOCUS T and recruits a Polycomb factor to repress the floral transition in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 118, 2021
6FAS
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Crystal structure of VAL1 B3 domain in complex with cognate DNA
分子名称: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*GP*CP*CP*AP*TP*GP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*TP*GP*CP*AP*TP*GP*GP*CP*T)-3')
著者Sasnauskas, G.
登録日2017-12-17
公開日2018-04-18
最終更新日2018-05-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of DNA target recognition by the B3 domain of Arabidopsis epigenome reader VAL1.
Nucleic Acids Res., 46, 2018
4I1K
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Crystal Structure of VRN1 (Residues 208-341)
分子名称: B3 domain-containing transcription factor VRN1, CHLORIDE ION
著者King, G, Chanson, A.H, McCallum, E.J, Ohme-Takagi, M, Byriel, K, Hill, J.M, Martin, J.L, Mylne, J.S.
登録日2012-11-21
公開日2012-12-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Arabidopsis B3 Domain Protein VERNALIZATION1 (VRN1) Is Involved in Processes Essential for Development, with Structural and Mutational Studies Revealing Its DNA-binding Surface.
J.Biol.Chem., 288, 2013
1WID
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BU of 1wid by Molmil
Solution Structure of the B3 DNA-Binding Domain of RAV1
分子名称: DNA-binding protein RAV1
著者Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution Structure of the B3 DNA Binding Domain of the Arabidopsis Cold-Responsive Transcription Factor RAV1
Plant Cell, 16, 2004
1YEL
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BU of 1yel by Molmil
Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1
分子名称: At1g16640
著者Peterson, F.C, Waltner, J.K, Lytle, B.L, Volkman, B.F, Center for Eukaryotic Structural Genomics (CESG)
登録日2004-12-28
公開日2005-01-18
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Structure of the B3 domain from Arabidopsis thaliana protein At1g16640
Protein Sci., 14, 2005
5YZY
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AtVAL1 B3 domain in complex with 13bp-DNA
分子名称: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*A)-3'), ...
著者Wu, B.X, Zhang, M.M.
登録日2017-12-17
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
5Z00
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AtVAL1 B3 domain in complex with 15bp-DNA
分子名称: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), ...
著者Wu, B.X, Zhang, M.M.
登録日2017-12-17
公開日2018-05-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.587 Å)
主引用文献Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
5YZZ
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AtVAL1 B3 domain in complex with 13bp-DNA
分子名称: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*A)-3')
著者Wu, B.X, Zhang, M.M.
登録日2017-12-17
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
6J9A
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Crystal structure of Arabidopsis thaliana VAL1 in complex with FLC DNA fragment
分子名称: B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
著者Hu, H, Du, J.
登録日2019-01-22
公開日2019-05-29
実験手法X-RAY DIFFRACTION (2.915 Å)
主引用文献Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J9C
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Crystal structure of Arabidopsis thaliana transcription factor LEC2-DNA complex
分子名称: B3 domain-containing transcription factor LEC2, DNA (5'-D(*CP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), DNA (5'-D(*GP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3')
著者Hu, H, Du, J.
登録日2019-01-22
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6J9B
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BU of 6j9b by Molmil
Arabidopsis FUS3-DNA complex
分子名称: B3 domain-containing transcription factor FUS3, DNA (5'-D(*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*C)-3'), DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*TP*G)-3')
著者Hu, H, Du, J.
登録日2019-01-22
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis.
Nat.Plants, 5, 2019
6SDG
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Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
分子名称: 21-7_A, 21-7_B, Auxin response factor
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2019-07-27
公開日2020-04-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Design principles of a minimal auxin response system.
Nat.Plants, 6, 2020
6YCQ
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BU of 6ycq by Molmil
Crystal structure of the DNA binding domain of Arabidopsis thaliana Auxin Response Factor 1 (AtARF1) in complex with High Affinity DNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 21-7A, 21-7B, ...
著者Crespo, I, Weijers, D, Boer, D.R.
登録日2020-03-18
公開日2020-09-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis .
Proc.Natl.Acad.Sci.USA, 117, 2020
4LDU
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BU of 4ldu by Molmil
Crystal structure of the DNA binding domain of Arabidopsis thaliana auxin response factor 5
分子名称: Auxin response factor 5, CHLORIDE ION
著者Boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDW
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BU of 4ldw by Molmil
Crystal structure of the DNA Binding Domain of arabidopsis thaliana auxin response factor 1, P21 structure
分子名称: Auxin response factor 1, CHLORIDE ION
著者boer, D.R, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDY
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Crystal structure of the DNA binding domain of the G245A mutant of arabidopsis thaliana auxin reponse factor 1
分子名称: Auxin response factor 1, CHLORIDE ION
著者Boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDV
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BU of 4ldv by Molmil
Crystal structure of the DNA binding domain of A. thailana auxin response factor 1
分子名称: Auxin response factor 1, CHLORIDE ION, FORMIC ACID, ...
著者boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDX
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Crystal structure of the DNA binding domain of arabidopsis thaliana auxin response factor 1 (ARF1) in complex with protomor-like sequence ER7
分子名称: Auxin response factor 1, ER7, forward sequence, ...
著者Boer, D.R, Freire-Rios, A, van den Berg, W.M.A, Weijers, D, Coll, M.
登録日2013-06-25
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014

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件を2024-03-27に公開中

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