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8I2E
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BU of 8i2e by Molmil
Crystal structure of Bacillus subtilis LytE in complex with IseA
分子名称: Probable peptidoglycan endopeptidase LytE, Uncharacterized protein YoeB
著者Tandukar, S, Kwon, E, Kim, D.Y.
登録日2023-01-14
公開日2023-04-05
最終更新日2023-05-17
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.
Structure, 31, 2023
7R1L
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BU of 7r1l by Molmil
Clostridium thermocellum CtCBM50 structure in complex with beta-1,4-GlcNAc trisaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Spore coat assembly protein SafA
著者Ribeiro, D.O, Costa, R, Palma, A.S, Carvalho, A.L.
登録日2022-02-03
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Unravelling Clostridium thermocellum LysM domains: a molecular view on the cooperative recognition of chitin and peptidoglycan
To Be Published
7VCM
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BU of 7vcm by Molmil
crystal structure of GINKO1
分子名称: Green fluorescent protein,Potassium binding protein Kbp,Green fluorescent protein, POTASSIUM ION
著者Wen, Y, Campbell, R.E, Lemieux, M.J.
登録日2021-09-03
公開日2022-07-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A sensitive and specific genetically-encoded potassium ion biosensor for in vivo applications across the tree of life.
Plos Biol., 20, 2022
7PUB
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BU of 7pub by Molmil
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
分子名称: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ...
著者Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N.
登録日2021-09-29
公開日2022-05-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PUA
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BU of 7pua by Molmil
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
分子名称: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ...
著者Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N.
登録日2021-09-29
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Proc.Natl.Acad.Sci.USA, 119, 2022
7BAX
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BU of 7bax by Molmil
Crystal structure of LYS11 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LysM type receptor kinase
著者Laursen, M, Cheng, J, Gysel, K, Blaise, M, Andersen, K.R.
登録日2020-12-16
公開日2021-11-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors.
Proc.Natl.Acad.Sci.USA, 118, 2021
7PVC
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BU of 7pvc by Molmil
The structure of Kbp.K from E. coli with potassium bound.
分子名称: POTASSIUM ION, Potassium binding protein Kbp
著者Smith, B.O.
登録日2021-10-01
公開日2021-10-13
最終更新日2023-10-11
実験手法SOLUTION NMR
主引用文献Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies.
ACS Sens, 7, 2022
7ANE
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BU of 7ane by Molmil
Leishmania Major mitochondrial ribosome
分子名称: 30S Ribosomal protein S17-like protein, 50S ribosomal protein L13-like protein, AKAP7_NLS domain-containing protein, ...
著者Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
登録日2020-10-11
公開日2021-06-23
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
7AOR
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BU of 7aor by Molmil
mt-SSU from Trypanosoma cruzi in complex with mt-IF-3.
分子名称: 30S Ribosomal protein S17-like protein, AKAP7_NLS domain-containing protein, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Soufari, H, Waltz, F, Parrot, C, Bochler, A, Hashem, Y.
登録日2020-10-15
公開日2021-04-28
最終更新日2021-06-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure of the mature kinetoplastids mitoribosome and insights into its large subunit biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
6VE2
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BU of 6ve2 by Molmil
Tetradecameric PilQ bound by TsaP heptamer from Pseudomonas aeruginosa
分子名称: Fimbrial assembly protein PilQ, LysM domain-containing protein
著者McCallum, M, Tammam, S, Rubinstein, J.L, Burrows, L.L, Howell, P.L.
登録日2019-12-28
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP.
Structure, 29, 2021
6XWE
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BU of 6xwe by Molmil
Crystal structure of LYK3 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETONITRILE, LysM domain receptor-like kinase 3, ...
著者Gysel, K, Blaise, M, Andersen, K.R.
登録日2020-01-23
公開日2020-08-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity.
Science, 369, 2020
6Q40
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BU of 6q40 by Molmil
A secreted LysM effector of the wheat pathogen Zymoseptoria tritici protects the fungal hyphae against chitinase hydrolysis through ligand-dependent polymerisation of LysM homodimers
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LysM domain-containing protein
著者Mesters, J.R, Saleem-Batcha, R, Sanchez-Vallet, A, Thomma, B.P.H.J.
登録日2018-12-05
公開日2019-10-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.412 Å)
主引用文献A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization.
Plos Pathog., 16, 2020
5YZ6
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BU of 5yz6 by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-13
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5YZK
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BU of 5yzk by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5YLG
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BU of 5ylg by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
分子名称: 1,2-ETHANEDIOL, Chitinase A, ZINC ION
著者Ohnuma, T, Kitaoku, Y, Umemoto, N, Numata, T, Fukamizo, T.
登録日2017-10-17
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To Be Published
6HIV
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BU of 6hiv by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome
分子名称: 12S rRNA, 50S ribosomal protein L13, putative, ...
著者Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boerhringer, D, Schneider, A, Ban, N.
登録日2018-08-31
公開日2018-10-03
最終更新日2018-11-07
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
6HIZ
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BU of 6hiz by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (143-MER), ...
著者Ramrath, D.J.F, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, A, Schneider, A, Ban, N.
登録日2018-08-31
公開日2018-09-26
最終更新日2018-11-07
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
6HIW
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BU of 6hiw by Molmil
Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3
分子名称: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Ramrath, D, Niemann, M, Leibundgut, M, Bieri, P, Prange, C, Horn, E.K, Leitner, A, Boehringer, D, Schneider, A, Ban, N.
登録日2018-08-31
公開日2018-09-26
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Evolutionary shift toward protein-based architecture in trypanosomal mitochondrial ribosomes.
Science, 362, 2018
5JCD
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BU of 5jcd by Molmil
Crystal structure of OsCEBiP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2017-02-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
5K2L
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BU of 5k2l by Molmil
Crystal structure of LysM domain from Volvox carteri chitinase
分子名称: 1,2-ETHANEDIOL, Chitinase, lysozyme
著者Kitaoku, Y, Numata, T, Fukamizo, T, Ohnuma, T.
登録日2016-05-19
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri.
Plant Mol. Biol., 93, 2017
5BUM
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BU of 5bum by Molmil
Crystal Structure of LysM domain from Equisetum arvense chitinase A
分子名称: Chitinase A, SULFATE ION
著者Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
登録日2015-06-04
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022
5JCE
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BU of 5jce by Molmil
Crystal structure of OsCEBiP complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
3JC9
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BU of 3jc9 by Molmil
Architectural model of the type IVa pilus machine in a non-piliated state
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PilA, ...
著者Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
登録日2015-11-24
公開日2016-03-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY
主引用文献Architecture of the type IVa pilus machine.
Science, 351, 2016
3JC8
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BU of 3jc8 by Molmil
Architectural model of the type IVa pilus machine in a piliated state
分子名称: LysM domain protein, PilA, PilN, ...
著者Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
登録日2015-11-24
公開日2016-03-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY
主引用文献Architecture of the type IVa pilus machine.
Science, 351, 2016
4S3K
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BU of 4s3k by Molmil
Crystal structure of the Bacillus megaterium QM B1551 spore cortex-lytic enzyme SleL
分子名称: SULFATE ION, Spore germination protein YaaH
著者Christie, G, Chirgadze, D.Y, Ustok, F.I.
登録日2015-02-04
公開日2015-08-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and functional analysis of SleL, a peptidoglycan lysin involved in germination of Bacillus spores.
Proteins, 83, 2015

 

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