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6XWE
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Crystal structure of LYK3 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETONITRILE, LysM domain receptor-like kinase 3, ...
著者Gysel, K, Blaise, M, Andersen, K.R.
登録日2020-01-23
公開日2020-08-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Ligand-recognizing motifs in plant LysM receptors are major determinants of specificity.
Science, 369, 2020
4UZ3
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Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus bound to N-acetyl-chitohexaose
分子名称: 1,4-DIETHYLENE DIOXIDE, 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Wong, J.E.M.M, Blaise, M.
登録日2014-09-04
公開日2015-01-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献An Intermolecular Binding Mechanism Involving Multiple Lysm Domains Mediates Carbohydrate Recognition by an Endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
2DJP
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BU of 2djp by Molmil
The solution structure of the LysM domain of human hypothetical protein SB145
分子名称: Hypothetical protein SB145
著者Sasagawa, A, Tochio, N, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-05
公開日2006-10-05
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献The solution structure of the LysM domain of human hypothetical protein SB145
To be Published
6Q40
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A secreted LysM effector of the wheat pathogen Zymoseptoria tritici protects the fungal hyphae against chitinase hydrolysis through ligand-dependent polymerisation of LysM homodimers
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, LysM domain-containing protein
著者Mesters, J.R, Saleem-Batcha, R, Sanchez-Vallet, A, Thomma, B.P.H.J.
登録日2018-12-05
公開日2019-10-16
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.412 Å)
主引用文献A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization.
Plos Pathog., 16, 2020
1E0G
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BU of 1e0g by Molmil
LYSM Domain from E.coli MLTD
分子名称: Membrane-bound lytic murein transglycosylase D
著者Bateman, A, Bycroft, M.
登録日2000-03-27
公開日2000-06-21
最終更新日2019-09-25
実験手法SOLUTION NMR
主引用文献The Structure of a Lysm Domain from E.Coli Membrane Bound Lytic Murein Transglycosylase D (Mltd)
J.Mol.Biol., 299, 2000
4EBZ
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BU of 4ebz by Molmil
Crystal structure of the ectodomain of a receptor like kinase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor receptor kinase 1, ...
著者Chai, J, Liu, T, Han, Z, She, J, Wang, J.
登録日2012-03-26
公開日2012-06-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Chitin-induced dimerization activates a plant immune receptor.
Science, 336, 2012
4EBY
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Crystal structure of the ectodomain of a receptor like kinase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor receptor kinase 1, ...
著者Chai, J, Liu, T, Han, Z, She, J, Wang, J.
登録日2012-03-25
公開日2012-06-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Chitin-induced dimerization activates a plant immune receptor.
Science, 336, 2012
4PXV
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BU of 4pxv by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
分子名称: Chitinase A, ZINC ION
著者Ohnuma, T, Umemoto, N, Numata, T, Fukamizo, T.
登録日2014-03-25
公開日2015-03-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To be Published
5YLG
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BU of 5ylg by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
分子名称: 1,2-ETHANEDIOL, Chitinase A, ZINC ION
著者Ohnuma, T, Kitaoku, Y, Umemoto, N, Numata, T, Fukamizo, T.
登録日2017-10-17
公開日2018-10-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To Be Published
7BAX
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BU of 7bax by Molmil
Crystal structure of LYS11 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, LysM type receptor kinase
著者Laursen, M, Cheng, J, Gysel, K, Blaise, M, Andersen, K.R.
登録日2020-12-16
公開日2021-11-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors.
Proc.Natl.Acad.Sci.USA, 118, 2021
5YZ6
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BU of 5yz6 by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-13
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5YZK
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BU of 5yzk by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
分子名称: Chitinase, lysozyme
著者Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5JCE
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BU of 5jce by Molmil
Crystal structure of OsCEBiP complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
5JCD
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Crystal structure of OsCEBiP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitin elicitor-binding protein
著者Chai, J.J, Liu, S.M, Wang, J.Z.
登録日2016-04-15
公開日2017-02-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Mechanism for Fungal Cell Wall Recognition by Rice Chitin Receptor OsCEBiP
Structure, 24, 2016
5K2L
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BU of 5k2l by Molmil
Crystal structure of LysM domain from Volvox carteri chitinase
分子名称: 1,2-ETHANEDIOL, Chitinase, lysozyme
著者Kitaoku, Y, Numata, T, Fukamizo, T, Ohnuma, T.
登録日2016-05-19
公開日2017-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri.
Plant Mol. Biol., 93, 2017
4UZ2
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BU of 4uz2 by Molmil
Crystal structure of the N-terminal LysM domains from the putative NlpC/P60 D,L endopeptidase from T. thermophilus
分子名称: CELL WALL-BINDING ENDOPEPTIDASE-RELATED PROTEIN
著者Wong, J.E.M.M, Blaise, M.
登録日2014-09-04
公開日2015-01-14
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An Intermolecular Binding Mechanism Involving Multiple Lysm Domains Mediates Carbohydrate Recognition by an Endopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
5BUM
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BU of 5bum by Molmil
Crystal Structure of LysM domain from Equisetum arvense chitinase A
分子名称: Chitinase A, SULFATE ION
著者Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
登録日2015-06-04
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022
7R1L
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BU of 7r1l by Molmil
Clostridium thermocellum CtCBM50 structure in complex with beta-1,4-GlcNAc trisaccharide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Spore coat assembly protein SafA
著者Ribeiro, D.O, Costa, R, Palma, A.S, Carvalho, A.L.
登録日2022-02-03
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Unravelling Clostridium thermocellum LysM domains: a molecular view on the cooperative recognition of chitin and peptidoglycan
To Be Published
2MKX
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Solution structure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis
分子名称: Autolysin
著者Baxter, N.J, Williamson, M.P.
登録日2014-02-14
公開日2014-06-18
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Molecular basis for bacterial peptidoglycan recognition by LysM domains.
Nat Commun, 5, 2014
2MPW
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Solution structure of the LysM region of the E. coli Intimin periplasmic domain
分子名称: Intimin
著者Coles, M, Chaubey, M, Leo, J.C, Linke, D, Schuetz, M.C, Goetz, F, Autenrieth, I.B.
登録日2014-06-05
公開日2014-11-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Intimin periplasmic domain mediates dimerisation and binding to peptidoglycan.
Mol.Microbiol., 95, 2015
4B8V
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Cladosporium fulvum LysM effector Ecp6 in complex with a beta-1,4- linked N-acetyl-D-glucosamine tetramer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Saleem-Batcha, R, Sanchez-Vallet, A, Hansen, G, Thomma, B.P.H.J, Mesters, J.R.
登録日2012-08-30
公開日2013-07-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Fungal Effector Ecp6 Outcompetes Host Immune Receptor for Chitin Binding Through Intrachain Lysm Dimerization
Elife, 2, 2013
4B9H
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Cladosporium fulvum LysM effector Ecp6 in complex with a beta-1,4- linked N-acetyl-D-glucosamine tetramer: I3C heavy atom derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, ...
著者Saleem-Batcha, R, Sanchez-Vallet, A, Hansen, G, Thomma, B.P.H.J, Mesters, J.R.
登録日2012-09-04
公開日2013-07-17
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fungal Effector Ecp6 Outcompetes Host Immune Receptor for Chitin Binding Through Intrachain Lysm Dimerization
Elife, 2, 2013
1Y7M
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Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
分子名称: CADMIUM ION, SULFATE ION, hypothetical protein BSU14040
著者Bielnicki, J.A, Devedjiev, Y, Derewenda, U, Dauter, Z, Joachimiak, A, Derewenda, Z.S, Midwest Center for Structural Genomics (MCSG)
登録日2004-12-09
公開日2005-03-01
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献B. subtilis ykuD protein at 2.0 A resolution: insights into the structure and function of a novel, ubiquitous family of bacterial enzymes.
Proteins, 62, 2006
7PVC
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The structure of Kbp.K from E. coli with potassium bound.
分子名称: POTASSIUM ION, Potassium binding protein Kbp
著者Smith, B.O.
登録日2021-10-01
公開日2021-10-13
最終更新日2023-10-11
実験手法SOLUTION NMR
主引用文献Tuning the Sensitivity of Genetically Encoded Fluorescent Potassium Indicators through Structure-Guided and Genome Mining Strategies.
ACS Sens, 7, 2022
5C8P
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Crystal structure of MoCVNH3 variant (Mo0v) in complex with (N-GlcNAc)3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MoCVNH3 variant
著者Koharudin, L.M.I, Gronenborn, A.M.
登録日2015-06-25
公開日2015-08-12
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain.
Structure, 23, 2015

 

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