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5CVB
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BU of 5cvb by Molmil
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a1a1a1 of type I collagen
分子名称: Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, ...
著者Boudko, S.P, Bachinger, H.P.
登録日2015-07-25
公開日2016-08-10
最終更新日2017-07-12
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
4GYX
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BU of 4gyx by Molmil
The von Willebrand Factor A3 domain binding region of type III collagen stabilized by the cysteine knot
分子名称: Type III collagen fragment in a host peptide stabilized by the cysteine knot
著者Boudko, S.P, Bachinger, H.P.
登録日2012-09-05
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献The NC2 Domain of Type IX Collagen Determines the Chain Register of the Triple Helix.
J.Biol.Chem., 287, 2012
6JEC
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BU of 6jec by Molmil
Structure of a triple-helix region of human collagen type II
分子名称: human collagen type II
著者Yang, X, Zhu, Y, Ye, S, Zhang, R.
登録日2019-02-05
公開日2020-02-05
実験手法X-RAY DIFFRACTION (2.049 Å)
主引用文献Structure of a triple-helix region of human collagen type II.
To Be Published
1K6F
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BU of 1k6f by Molmil
Crystal Structure of the Collagen Triple Helix Model [(Pro-Pro-Gly)10]3
分子名称: collagen triple helix
著者Berisio, R, Vitagliano, L, Mazzarella, L, Zagari, A.
登録日2001-10-16
公開日2002-01-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)
Protein Sci., 11, 2002
6HG7
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BU of 6hg7 by Molmil
Crystal structure of a collagen II fragment containing the binding site of PEDF and COMP, (POG)4-LKG HRG FTG LQG-POG(4)
分子名称: Collagen alpha-1(II) chain, SULFATE ION
著者Gebauer, J.M, Koehler, A, Dietmar, H, Gompert, M, Neundorf, I, Zaucke, F, Koch, M, Baumann, U.
登録日2018-08-22
公開日2018-12-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献COMP and TSP-4 interact specifically with the novel GXKGHR motif only found in fibrillar collagens.
Sci Rep, 8, 2018
7WWS
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BU of 7wws by Molmil
Structure of a triple-helix region of human collagen type III from Trautec
分子名称: Collagen alpha-1(III) chain
著者Qian, S, Li, H, Fan, X, Tian, X, Li, J, Wang, L, Chu, Y.
登録日2022-02-14
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of a triple-helix region of human collagen type III from Trautec
To Be Published
7WWR
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BU of 7wwr by Molmil
Structure of a triple-helix region of human collagen type III from Trautec
分子名称: Collagen alpha-1(III) chain
著者Qian, S, Li, H, Fan, X, Tian, X, Li, J, Wang, L, Chu, Y.
登録日2022-02-14
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of a triple-helix region of human collagen type III from Trautec
To Be Published
5MV4
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BU of 5mv4 by Molmil
ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23)
分子名称: ACC1 antibody Fab fragment, heavy chain, light chain, ...
著者Dobritzsch, D, Holmdahl, R, Ge, C.
登録日2017-01-15
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5MV3
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BU of 5mv3 by Molmil
ACC1 Fab fragment in complex with CII583-591 (CG10)
分子名称: heavy chain of ACC1 Fab fragment, light chain of ACC1 Fab fragment, synthetic peptide containing the CII583-591 epitope of collagen type II,Collagen alpha-1(II) chain,synthetic peptide containing the CII583-591 epitope of collagen type II,
著者Dobritzsch, D, Holmdahl, R, Ge, C.
登録日2017-01-15
公開日2017-07-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
3DMW
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BU of 3dmw by Molmil
Crystal structure of human type III collagen G982-G1023 containing C-terminal cystine knot
分子名称: Collagen alpha-1(III) chain
著者Boudko, S.P, Engel, J, Okuyama, K, Mizuno, K, Bachinger, H.P, Schumacher, M.A.
登録日2008-07-01
公開日2008-09-30
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries.
J.Biol.Chem., 283, 2008
1Q7D
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BU of 1q7d by Molmil
Structure of the integrin alpha2beta1 binding collagen peptide
分子名称: collagen alfa 1(I) chain peptide GPOGPOGFOGERGPOGPOGPO
著者Emsley, J, Knight, C.G, Farndale, R.W, Barnes, M.J.
登録日2003-08-18
公開日2004-01-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Integrin alpha2beta1-binding Collagen Peptide.
J.Mol.Biol., 335, 2004
5CTI
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BU of 5cti by Molmil
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a2a1a1 of type I collagen (native form)
分子名称: Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain, ...
著者Boudko, S.P, Bachinger, H.P.
登録日2015-07-24
公開日2016-08-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8994 Å)
主引用文献Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
5CVA
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BU of 5cva by Molmil
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a1a2a1 of type I collagen
分子名称: Collagen alpha-1(I) chain,Collagen alpha-2(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, Collagen alpha-2(I) chain,Collagen alpha-1(IX) chain, ...
著者Boudko, S.P, Bachinger, H.P.
登録日2015-07-25
公開日2016-08-10
最終更新日2017-07-12
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
5CTD
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BU of 5ctd by Molmil
Crystal structure of the type IX collagen NC2 hetero-trimerization domain with a guest fragment a2a1a1 of type I collagen
分子名称: Collagen alpha-1(I) chain,Collagen alpha-1(IX) chain, Collagen alpha-1(I) chain,Collagen alpha-3(IX) chain, Collagen alpha-2(I) chain,Collagen alpha-2(IX) chain
著者Boudko, S.P, Bachinger, H.P.
登録日2015-07-23
公開日2016-08-03
最終更新日2017-07-12
実験手法X-RAY DIFFRACTION (1.5991 Å)
主引用文献Structural insight for chain selection and stagger control in collagen.
Sci Rep, 6, 2016
2CUO
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BU of 2cuo by Molmil
Collagen model peptide (PRO-PRO-GLY)9
分子名称: COLLAGEN MODEL PEPTIDE (PRO-PRO-GLY)9
著者Hongo, C, Noguchi, K, Okuyama, K, Tanaka, Y, Nishino, N.
登録日2005-05-27
公開日2005-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Repetitive interactions observed in the crystal structure of a collagen-model peptide, [(Pro-Pro-Gly)9]3
J.Biochem.(Tokyo), 138, 2005
1WZB
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BU of 1wzb by Molmil
Crystal structure of the collagen triple helix model [{HYP(R)-HYP(R)-GLY}10]3
分子名称: Collagen triple helix
著者Kawahara, K, Nakamura, S, Nishi, Y, Uchiyama, S, Nishiuchi, Y, Nakazawa, T, Ohkubo, T, Kobayashi, Y.
登録日2005-03-03
公開日2006-01-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Effect of hydration on the stability of the collagen-like triple-helical structure of [4(R)-hydroxyprolyl-4(R)-hydroxyprolylglycine]10
Biochemistry, 44, 2005
1X1K
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BU of 1x1k by Molmil
Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4
分子名称: Host-guest peptide (Pro-Pro-Gly)4-(Pro-alloHyp-Gly)-(Pro-Pro-Gly)4
著者Jiravanichanun, N, Hongo, C, Wu, G, Noguchi, K, Okuyama, K, Nishino, N, Silva, T.
登録日2005-04-05
公開日2005-06-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Unexpected puckering of hydroxyproline in the guest triplets, hyp-pro-gly and pro-allohyp-gly sandwiched between pro-pro-gly sequence
Chembiochem, 6, 2005
2D3H
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BU of 2d3h by Molmil
Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4
分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
著者Wu, G, Noguchi, K, Okuyama, K, Mizuno, K, Bachinger, H.P.
登録日2005-09-28
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
2D3F
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BU of 2d3f by Molmil
Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Pro-Hyp-Gly-(Pro-Pro-Gly)4
分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-PRO-HYP-GLY-(PRO-PRO-GLY)4
著者Wu, G, Noguchi, K, Okuyama, K, Ebisuzaki, S, Nishino, N.
登録日2005-09-27
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
3AH9
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BU of 3ah9 by Molmil
Crystal structure of (Pro-Pro-Gly)9 at 1.1 A resolution
分子名称: ACETIC ACID, AZIDE ION, collagen-like peptide
著者Okuyama, K, Morimoto, T, Hongo, C, Hosaka, N, Nishino, N.
登録日2010-04-22
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Crystal structure of (Pro-Pro-Gly)9
To be Published
1YM8
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BU of 1ym8 by Molmil
crystal structure of GZZ shows up puckering of the proline ring in the Xaa position.
分子名称: collagen gly-4(R)hyp-4(R)hyp
著者Schumacher, M.A, Mizuno, K, Bachinger, H.P.
登録日2005-01-20
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The crystal structure of the collagen-like polypeptide (glycyl-4(R)-hydroxyprolyl-4(R)-hydroxyprolyl)9 at 1.55 A resolution shows up-puckering of the proline ring in the Xaa position.
J.Biol.Chem., 280, 2005
3AI6
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BU of 3ai6 by Molmil
Triple-helical structure of (D-Pro-D-Pro-Gly)9 at 1.1 A resolution
分子名称: collagen-like peptide
著者Okuyama, K, Miyama, K, Kawaguchi, T, Nishino, N.
登録日2010-05-10
公開日2011-04-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Triple-helical structure of (D-Pro-D-Pro-Gly)9
To be Published
3B2C
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BU of 3b2c by Molmil
Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3
分子名称: Collagen-like peptide
著者Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S.
登録日2011-07-26
公開日2012-04-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units
Biopolymers, 98, 2011
3B0S
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BU of 3b0s by Molmil
Crystal Structure of (Gly-Pro-Hyp)9
分子名称: collagen-like peptide
著者Okuyama, K, Miyama, K, Mizuno, K, Bachinger, H.P.
登録日2011-06-14
公開日2012-05-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of (Gly-Pro-Hyp)(9) : Implications for the collagen molecular model.
Biopolymers, 97, 2012
3HR2
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BU of 3hr2 by Molmil
Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, post rigid body refinement, 'relaxed'
分子名称: Collagen alpha-1(I) chain, Collagen alpha-2(I) chain
著者Orgel, J.P.
登録日2009-06-08
公開日2009-07-14
最終更新日2024-02-21
実験手法FIBER DIFFRACTION (5.16 Å)
主引用文献Microfibrillar Structure of Type I Collagen in Situ.
Proc.Natl.Acad.Sci.USA, 103, 2006

 

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