PDB: 15 件ウェブページステータス検索Chemie searchBIRD

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4WFS	Crystal Structure of tRNA-dihydrouridine(20) synthase catalytic domain 分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, SULFATE ION, ... 著者 Bou-Nader, C, Pecqueur, L, Kamah, A, Bregeon, D, Golinelli-Pimpaneau, B, Guimaraes, B.G, Fontecave, M, Hamdane, D. 登録日 2014-09-17 公開日 2015-10-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 An extended dsRBD is required for post-transcriptional modification in human tRNAs. Nucleic Acids Res., 43, 2015
1VHN	Crystal structure of a putative flavin oxidoreductase with flavin 分子名称: FLAVIN MONONUCLEOTIDE, SULFATE ION, putative flavin oxidoreductase 著者 Structural GenomiX 登録日 2003-12-01 公開日 2003-12-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 The 1.59 A resolution crystal structure of TM0096, a flavin mononucleotide binding protein from Thermotoga maritima. Proteins, 55, 2004
3W9Z	Crystal structure of DusC 分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase C 著者 Chen, M, Yu, J, Tanaka, Y, Tanaka, I, Yao, M. 登録日 2013-04-19 公開日 2013-07-31 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of dihydrouridine synthase C (DusC) from Escherichia coli Acta Crystallogr.,Sect.F, 69, 2013
4BF9	Crystal structure of E. coli dihydrouridine synthase C (DusC) (selenomethionine derivative) 分子名称: FLAVIN MONONUCLEOTIDE, TRNA-DIHYDROURIDINE SYNTHASE C 著者 Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A. 登録日 2013-03-16 公開日 2013-11-06 最終更新日 2015-05-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases. Proc.Natl.Acad.Sci.USA, 112, 2015
4BFA	Crystal structure of E. coli dihydrouridine synthase C (DusC) 分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NITRATE ION, ... 著者 Byrne, R.T, Whelan, F, Konevega, A, Aziz, N, Rodnina, M, Antson, A.A. 登録日 2013-03-16 公開日 2013-11-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Major Reorientation of tRNA Substrates Defines Specificity of Dihydrouridine Synthases. Proc.Natl.Acad.Sci.USA, 112, 2015
3B0V	tRNA-dihydrouridine synthase from Thermus thermophilus in complex with tRNA 分子名称: FLAVIN MONONUCLEOTIDE, tRNA, tRNA-dihydrouridine synthase 著者 Yu, F, Tanaka, Y, Yamashita, K, Nakamura, A, Yao, M, Tanaka, I. 登録日 2011-06-14 公開日 2011-12-14 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Molecular basis of dihydrouridine formation on tRNA Proc.Natl.Acad.Sci.USA, 108, 2011
3B0U	tRNA-dihydrouridine synthase from Thermus thermophilus in complex with tRNA fragment 分子名称: FLAVIN MONONUCLEOTIDE, RNA (5'-R(*GP*GP*(H2U)P*A)-3'), tRNA-dihydrouridine synthase 著者 Yu, F, Tanaka, Y, Yamashita, K, Nakamura, A, Yao, M, Tanaka, I. 登録日 2011-06-14 公開日 2011-12-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.948 Å) 主引用文献 Molecular basis of dihydrouridine formation on tRNA Proc.Natl.Acad.Sci.USA, 108, 2011
4XP7	Crystal structure of Human tRNA dihydrouridine synthase 2 分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 著者 Whelan, F, Jenkins, H.T, Griffiths, S, Byrne, R.T, Dodson, E.J, Antson, A.A. 登録日 2015-01-16 公開日 2015-01-28 最終更新日 2015-07-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 From bacterial to human dihydrouridine synthase: automated structure determination. Acta Crystallogr.,Sect.D, 71, 2015
3B0P	tRNA-dihydrouridine synthase from Thermus thermophilus 分子名称: FLAVIN MONONUCLEOTIDE, tRNA-dihydrouridine synthase 著者 Yu, F, Tanaka, Y, Yamashita, K, Nakamura, A, Yao, M, Tanaka, I. 登録日 2011-06-12 公開日 2011-12-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular basis of dihydrouridine formation on tRNA Proc.Natl.Acad.Sci.USA, 108, 2011
4YCP	E. coli dihydrouridine synthase C (DusC) in complex with tRNATrp 分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, SULFATE ION, ... 著者 Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A. 登録日 2015-02-20 公開日 2015-04-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases. Proc.Natl.Acad.Sci.USA, 112, 2015
4YCO	E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe 分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, MANGANESE (II) ION, ... 著者 Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A. 登録日 2015-02-20 公開日 2015-04-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases. Proc.Natl.Acad.Sci.USA, 112, 2015
6EI9	Crystal structure of E. coli tRNA-dihydrouridine synthase B (DusB) 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Bou-Nader, C, Hamdane, D. 登録日 2017-09-18 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Unveiling structural and functional divergences of bacterial tRNA dihydrouridine synthases: perspectives on the evolution scenario. Nucleic Acids Res., 46, 2018
6EZA	Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain E294K mutant 分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Bou-Nader, C, Bregeon, D, Pecqueur, L, Vincent, G, Fontecave, M, Hamdane, D. 登録日 2017-11-14 公開日 2018-09-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases. Biochemistry, 57, 2018
6EZB	Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain Q305K mutant 分子名称: FLAVIN MONONUCLEOTIDE, GLYCEROL, SULFATE ION, ... 著者 Bou-Nader, C, Bregeon, D, Pecqueur, L, Fontecave, M, Hamdane, D. 登録日 2017-11-14 公開日 2018-09-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases. Biochemistry, 57, 2018
6EZC	Crystal Structure of human tRNA-dihydrouridine(20) synthase catalytic domain E294K Q305K double mutant 分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Bou-Nader, C, Bregeon, D, Vincent, G, Fontecave, M, Hamdane, D. 登録日 2017-11-14 公開日 2018-09-26 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Electrostatic Potential in the tRNA Binding Evolution of Dihydrouridine Synthases. Biochemistry, 57, 2018