Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2J6W
DownloadVisualize
BU of 2j6w by Molmil
R164N mutant of the RUNX1 Runt domain
分子名称: CHLORIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1
著者Grembecka, J, Zhe, L, Lukasik, S.M, Liu, Y, Bielnicka, I, Bushweller, J.H, Speck, N.A.
登録日2006-10-04
公開日2007-10-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Mutation in the S-Switch Region of the Runt Domain Alters the Dynamics of an Allosteric Network Responsible for Cbfbeta Regulation.
J.Mol.Biol., 364, 2006
1HJC
DownloadVisualize
BU of 1hjc by Molmil
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
分子名称: DNA (5'-(*GP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP* TP*TP*GP*CP*G)-3'), DNA (5'-(CP*CP*GP*CP*AP*AP*CP*CP*AP*CP*AP* GP*AP*GP*TP*T)-3'), RUNT-RELATED TRANSCRIPTION FACTOR 1
著者Tahirov, T.H, Ogata, K.
登録日2001-01-11
公開日2001-03-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural Analyses of DNA Recognition by the Aml1/Runx-1 Runt Domain and its Allosteric Control by Cbfbeta
Cell(Cambridge,Mass.), 104, 2001
1LJM
DownloadVisualize
BU of 1ljm by Molmil
DNA recognition is mediated by conformational transition and by DNA bending
分子名称: CHLORIDE ION, RUNX1 transcription factor
著者Bartfeld, D, Shimon, L, Couture, G.C, Rabinovich, D, Frolow, F, Levanon, D, Groner, Y, Shakked, Z.
登録日2002-04-22
公開日2002-11-06
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA Recognition by the RUNX1 Transcription Factor Is Mediated by an Allosteric Transition in the RUNT Domain and by DNA Bending.
Structure, 10
1CMO
DownloadVisualize
BU of 1cmo by Molmil
IMMUNOGLOBULIN MOTIF DNA-RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAIN
分子名称: POLYOMAVIRUS ENHANCER BINDING PROTEIN 2
著者Nagata, T, Gupta, V, Sorce, D, Kim, W.Y, Sali, A, Chait, B.T, Shigesada, K, Ito, Y, Werner, M.H.
登録日1999-05-11
公開日2000-01-05
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Immunoglobulin motif DNA recognition and heterodimerization of the PEBP2/CBF Runt domain.
Nat.Struct.Biol., 6, 1999
1CO1
DownloadVisualize
BU of 1co1 by Molmil
FOLD OF THE CBFA
分子名称: CORE BINDING FACTOR ALPHA
著者Berardi, M.J, Bushweller, J.H.
登録日1999-05-31
公開日2000-06-07
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The Ig fold of the core binding factor alpha Runt domain is a member of a family of structurally and functionally related Ig-fold DNA-binding domains.
Structure Fold.Des., 7, 1999
1EAQ
DownloadVisualize
BU of 1eaq by Molmil
The RUNX1 Runt domain at 1.25A resolution: A structural switch and specifically bound chloride ions modulate DNA binding
分子名称: CHLORIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1
著者Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T, Grundstrom, T, Sauer, U.H.
登録日2001-07-14
公開日2002-09-12
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Runx1 Runt Domain at 1.25 A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding
J.Mol.Biol., 322, 2002
1EAO
DownloadVisualize
BU of 1eao by Molmil
THE RUNX1 Runt domain at 1.4A resolution: a structural switch and specifically bound chloride ions modulate DNA binding
分子名称: BROMIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1
著者Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T.H, Grundstrom, T, Sauer, U.H.
登録日2001-07-14
公開日2002-09-12
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Runx1 Runt Domain at 1.25A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding
J.Mol.Biol., 322, 2002
1EAN
DownloadVisualize
BU of 1ean by Molmil
THE RUNX1 Runt domain at 1.70A resolution: A structural switch and specifically bound chloride ions modulate DNA binding
分子名称: CHLORIDE ION, RUNT-RELATED TRANSCRIPTION FACTOR 1
著者Backstrom, S, Wolf-Watz, M, Grundstrom, C, Hard, T, Grundstrom, T, Sauer, U.H.
登録日2001-07-13
公開日2002-09-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Runx1 Runt Domain at 1.25 A Resolution: A Structural Switch and Specifically Bound Chloride Ions Modulate DNA Binding
J.Mol.Biol., 322, 2002
1H9D
DownloadVisualize
BU of 1h9d by Molmil
Aml1/cbf-beta/dna complex
分子名称: CORE-BINDING FACTOR ALPHA SUBUNIT1, CORE-BINDING FACTOR CBF-BETA, DNA (5'-(*CP*AP*AP*CP*CP*GP*CP*AP*AP*C)-3'), ...
著者Bravo, J, Warren, A.J.
登録日2001-03-07
公開日2001-03-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Leukemia-Associated Aml1 (Runx1)-Cbfbeta Complex Functions as a DNA-Induced Molecular Clamp
Nat.Struct.Biol., 8, 2001
1HJB
DownloadVisualize
BU of 1hjb by Molmil
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
分子名称: CCAAT/ENHANCER BINDING PROTEIN BETA, DNA (5'-(*CP*CP*GP*CP*AP*AP*CP*CP*AP*CP* AP*GP*AP*GP*TP*TP*TP*GP*GP*AP*AP*AP*TP*CP*TP*T)-3'), DNA (5'-(*GP*AP*AP*GP*AP*TP*TP*TP*CP*CP* AP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP*TP*TP*GP*CP*G)-3'), ...
著者Tahirov, T.H, Ogata, K.
登録日2001-01-11
公開日2001-03-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Analyses of DNA Recognition by the Aml1/Runx-1 Runt Domain and its Allosteric Control by Cbfbeta
Cell(Cambridge,Mass.), 104, 2001
1IO4
DownloadVisualize
BU of 1io4 by Molmil
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN HETERODIMER AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
分子名称: CAAT/ENHANCER BINDING PROTEIN BETA, CORE-BINDING FACTOR, BETA SUBUNIT, ...
著者Tahirov, T.H, Ogata, K.
登録日2001-01-10
公開日2001-03-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural analyses of DNA recognition by the AML1/Runx-1 Runt domain and its allosteric control by CBFbeta.
Cell(Cambridge,Mass.), 104, 2001
1E50
DownloadVisualize
BU of 1e50 by Molmil
AML1/CBFbeta complex
分子名称: CORE-BINDING FACTOR ALPHA SUBUNIT, CORE-BINDING FACTOR CBF-BETA
著者Warren, A.J, Bravo, J, Williams, R.L, Rabbits, T.H.
登録日2000-07-13
公開日2001-07-12
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for the Heterodimeric Interaction between the Acute Leukaemia-Associated Transcription Factors Aml1 and Cbfbeta
Embo J., 19, 2000
4L0Y
DownloadVisualize
BU of 4l0y by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 1)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Protein C-ets-1, ...
著者Tahirov, T.H.
登録日2013-06-01
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
4L18
DownloadVisualize
BU of 4l18 by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 3)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', GLYCEROL, ...
著者Tahirov, T.H.
登録日2013-06-02
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
4L0Z
DownloadVisualize
BU of 4l0z by Molmil
Crystal structure of Runx1 and Ets1 bound to TCR alpha promoter (crystal form 2)
分子名称: 5'-D(*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Protein C-ets-1, ...
著者Tahirov, T.H.
登録日2013-06-01
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of Ets1 activation by Runx1.
Leukemia, 28, 2014
6VGD
DownloadVisualize
BU of 6vgd by Molmil
Crystal structure of the DNA binding domain (DBD) of human FLI1 and the complex of the DBD of human Runx2 with core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
分子名称: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
著者Hou, C, Tsodikov, O.V.
登録日2020-01-07
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VGG
DownloadVisualize
BU of 6vgg by Molmil
Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), and mithramycin, in complex with 16mer DNA CAGAGGATGTGGCTTC
分子名称: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
著者Hou, C, Rohr, J, Tsodikov, O.V.
登録日2020-01-08
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.31 Å)
主引用文献Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VGE
DownloadVisualize
BU of 6vge by Molmil
Crystal structure of the DNA binding domains of human transcription factor ERG, human Runx2 bound to core binding factor beta (Cbfb), in complex with 16mer DNA CAGAGGATGTGGCTTC
分子名称: Core-binding factor subunit beta, DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), ...
著者Hou, C, Tsodikov, O.V.
登録日2020-01-07
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.25 Å)
主引用文献Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
6VG8
DownloadVisualize
BU of 6vg8 by Molmil
Crystal structure of the DNA binding domains of human FLI1 and Runx2 in complex with 16-mer DNA CAGAGGATGTGGCTTC
分子名称: DNA (5'-D(P*CP*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*TP*G)-3'), Friend leukemia integration 1 transcription factor, ...
著者Hou, C, Tsodikov, O.V.
登録日2020-01-07
公開日2020-11-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4.31 Å)
主引用文献Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Structure, 29, 2021
3WTW
DownloadVisualize
BU of 3wtw by Molmil
Crystal structure of the complex comprised of ETS1(K167A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTY
DownloadVisualize
BU of 3wty by Molmil
Crystal structure of the complex comprised of ETS1(G333P), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTX
DownloadVisualize
BU of 3wtx by Molmil
Crystal structure of the complex comprised of ETS1(Y329A), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTV
DownloadVisualize
BU of 3wtv by Molmil
Crystal structure of the complex comprised of ETS1(V170G), RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: Core-binding factor subunit beta, DNA (5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3'), ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTT
DownloadVisualize
BU of 3wtt by Molmil
Crystal structure of the complex comprised of phosphorylated ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: 5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Core-binding factor subunit beta, ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015
3WTS
DownloadVisualize
BU of 3wts by Molmil
Crystal structure of the complex comprised of ETS1, RUNX1, CBFBETA, and the tcralpha gene enhancer DNA
分子名称: 5'-D(*AP*GP*AP*GP*GP*AP*TP*GP*TP*GP*GP*CP*TP*TP*C)-3', 5'-D(*GP*AP*AP*GP*CP*CP*AP*CP*AP*TP*CP*CP*TP*CP*T)-3', Core-binding factor subunit beta, ...
著者Shiina, M, Hamada, K, Ogata, K.
登録日2014-04-21
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A novel allosteric mechanism on protein-DNA interactions underlying the phosphorylation-dependent regulation of Ets1 target gene expressions.
J.Mol.Biol., 427, 2015

 

12>

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon