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3S6W
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BU of 3s6w by Molmil
Crystal structure of Tudor domain of human TDRD3
分子名称: ISOPROPYL ALCOHOL, Tudor domain-containing protein 3
著者Liu, H.P, Xu, R.M.
登録日2011-05-26
公開日2012-03-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of TDRD3 and methyl-arginine binding characterization of TDRD3, SMN and SPF30
Plos One, 7, 2012
8JTN
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BU of 8jtn by Molmil
Tudor domain of TDRD3 in complex with a small molecule
分子名称: 2-propyl-2-azoniatricyclo[7.3.0.0^{3,7}]dodeca-1(9),2,7-trien-8-amine, Tudor domain-containing protein 3
著者Chen, M, Wang, Z, Li, W, Shang, X, Liu, Y.
登録日2023-06-22
公開日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Tudor domain of TDRD3 in complex with a small molecule antagonist.
Biochim Biophys Acta Gene Regul Mech, 1866, 2023
6V9T
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BU of 6v9t by Molmil
Tudor domain of TDRD3 in complex with a small molecule
分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Tudor domain-containing protein 3, UNKNOWN ATOM OR ION
著者Li, W, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-12-16
公開日2019-12-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
2WAC
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BU of 2wac by Molmil
Extended Tudor domain of Drosophila Melanogaster Tudor-SN (p100)
分子名称: CG7008-PA
著者Friberg, A, Corsini, L, Sattler, M.
登録日2009-02-04
公開日2009-03-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Ligand Binding of the Extended Tudor Domain of D. Melanogaster Tudor-Sn
J.Mol.Biol., 387, 2009
6PI7
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BU of 6pi7 by Molmil
Crystal structure of the TDRD2 extended Tudor domain in complex with an antibody fragment and the PIWIL1 peptide
分子名称: Fab antigen-binding fragment, Piwi-like protein 1, Tudor and KH domain-containing protein, ...
著者Liu, K, Min, J.R, Structural Genomics Consortium (SGC)
登録日2019-06-26
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Lesson from a Fab-enabled co-crystallization study of TDRD2 and PIWIL1.
Methods, 175, 2020
7CFD
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BU of 7cfd by Molmil
Drosophila melanogaster Krimper eTud2-AubR15me2 complex
分子名称: FI20010p1, Protein aubergine
著者Hu, H, Li, S.
登録日2020-06-25
公開日2021-06-02
最終更新日2021-09-15
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex.
Nat Commun, 12, 2021
7OC3
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BU of 7oc3 by Molmil
Crystal structure of the third tudor domain of Qin
分子名称: PHOSPHATE ION, Qin
著者Dhimole, N, Klug, W, Carlomagno, T.
登録日2021-04-25
公開日2022-05-04
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of the third tudor domain of Qin
To Be Published
5J39
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BU of 5j39 by Molmil
Crystal Structure of the extended TUDOR domain from TDRD2
分子名称: CACODYLATE ION, Tudor and KH domain-containing protein, UNKNOWN ATOM OR ION
著者Zhang, H, Tempel, W, Dong, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2016-03-30
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for arginine methylation-independent recognition of PIWIL1 by TDRD2.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4Q5W
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BU of 4q5w by Molmil
Crystal structure of extended-Tudor 9 of Drosophila melanogaster
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Maternal protein tudor
著者Ren, R, Liu, H, Wang, W, Wang, M, Yang, N, Dong, Y, Gong, W, Lehmann, R, Xu, R.M.
登録日2014-04-17
公開日2014-05-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structure and domain organization of Drosophila Tudor
Cell Res., 24, 2014
4Q5Y
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BU of 4q5y by Molmil
Crystal structure of extended-Tudor 10-11 of Drosophila melanogaster
分子名称: Maternal protein tudor
著者Liu, H, Ren, R, Wang, W, Wang, M, Yang, N, Dong, Y, Gong, W, Lehmann, R, Xu, R.M.
登録日2014-04-18
公開日2014-05-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure and domain organization of Drosophila Tudor
Cell Res., 24, 2014
4B9W
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BU of 4b9w by Molmil
Structure of extended Tudor domain TD3 from mouse TDRD1 in complex with MILI peptide containing dimethylarginine 45.
分子名称: GLYCEROL, PIWI-LIKE PROTEIN 2, TUDOR DOMAIN-CONTAINING PROTEIN 1
著者Mathioudakis, N, Palencia, A, Kadlec, J, Round, A, Tripsianes, K, Sattler, M, Pillai, R.S, Cusack, S.
登録日2012-09-08
公開日2012-10-17
最終更新日2019-04-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The multiple Tudor domain-containing protein TDRD1 is a molecular scaffold for mouse Piwi proteins and piRNA biogenesis factors.
Rna, 18, 2012
4B9X
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BU of 4b9x by Molmil
Structure of extended Tudor domain TD3 from mouse TDRD1
分子名称: TUDOR DOMAIN-CONTAINING PROTEIN 1
著者Mathioudakis, N, Palencia, A, Kadlec, J, Round, A, Tripsianes, K, Sattler, M, Pillai, R.S, Cusack, S.
登録日2012-09-08
公開日2012-10-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Multiple Tudor Domain-Containing Protein Tdrd1 is a Molecular Scaffold for Mouse Piwi Proteins and Pirna Biogenesis Factors.
RNA, 18, 2012
5M9N
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BU of 5m9n by Molmil
Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
分子名称: 1,2-ETHANEDIOL, E2F peptide, N3, ...
著者Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
登録日2016-11-01
公開日2016-11-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
3FDR
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BU of 3fdr by Molmil
Crystal structure of TDRD2
分子名称: Tudor and KH domain-containing protein
著者Amaya, M.F, Adams, M.A, Guo, Y, Li, Y, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
登録日2008-11-26
公開日2009-01-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mouse Piwi interactome identifies binding mechanism of Tdrkh Tudor domain to arginine methylated Miwi
Proc.Natl.Acad.Sci.USA, 106, 2009
5VQG
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BU of 5vqg by Molmil
Crystal structure of the extended Tudor domain from BmPAPI
分子名称: Tudor and KH domain-containing protein homolog
著者Hubbard, P.A, Pan, X, Ohtaki, A, McNally, R, Honda, S, Kirino, Y, Murali, R.
登録日2017-05-08
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis
To Be Published
5VY1
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BU of 5vy1 by Molmil
Crystal structure of the extended Tudor domain from BmPAPI
分子名称: Tudor and KH domain-containing protein homolog
著者Hubbard, P.A, Pan, X, McNally, R, Ohtaki, A, Honda, S, Kirino, Y, Murali, R.
登録日2017-05-24
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis
To Be Published
5VQH
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BU of 5vqh by Molmil
Crystal structure of the extended Tudor domain from BmPAPI in complex with sDMA
分子名称: N3, N4-DIMETHYLARGININE, Tudor and KH domain-containing protein homolog
著者Hubbard, P.A, Pan, X, Ohtaki, A, McNally, R, Honda, S, Kirino, Y, Murali, R.
登録日2017-05-08
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural studies of the Tudor domain from the Bombyx homolog of Drosophila PAPI: Implication to piRNA biogenesis
To Be Published
2D9T
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BU of 2d9t by Molmil
Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
分子名称: Tudor domain-containing protein 3
著者Li, H, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-13
公開日2006-06-13
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
To be Published
2DIQ
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BU of 2diq by Molmil
Solution structure of the TUDOR domain of Tudor and KH domain containing protein
分子名称: Tudor and KH domain-containing protein
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-30
公開日2006-09-30
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of Tudor and KH domain containing protein
To be Published
2E6N
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BU of 2e6n by Molmil
Solution structure of the TUDOR domain of Staphylococcal nuclease domain-containing protein 1
分子名称: Staphylococcal nuclease domain-containing protein 1
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-27
公開日2007-07-03
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of Staphylococcal nuclease domain-containing protein 1
To be Published
2EQK
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BU of 2eqk by Molmil
Solution structure of the TUDOR domain of Tudor domain-containing protein 4
分子名称: Tudor domain-containing protein 4
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2007-10-02
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献Solution structure of the TUDOR domain of Tudor domain-containing protein 4
To be Published
5YJ8
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BU of 5yj8 by Molmil
Identification of a small molecule inhibitor for the Tudor domain of TDRD3
分子名称: 5-(aminomethyl)-1,3-dimethyl-benzimidazol-2-one, SULFATE ION, Tudor domain-containing protein 3
著者Liu, J, Ruan, K.
登録日2017-10-09
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Structural plasticity of the TDRD3 Tudor domain probed by a fragment screening hit.
FEBS J., 285, 2018
5YGF
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BU of 5ygf by Molmil
Crystal structure of Drosophila melanogaster Papi extended Tudor domain (D287A) in complex with Piwi N-terminal R10-unme peptide
分子名称: ASP-GLN-GLY-ARG-GLY-ARG-ARG-ARG-PRO, GH18329p
著者Zhang, Y.H, Huang, Y.
登録日2017-09-22
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Structural insights into the sequence-specific recognition of Piwi byDrosophilaPapi
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YGD
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BU of 5ygd by Molmil
Crystal structure of Drosophila melanogaster Papi extended Tudor domain (D287A) in complex with Piwi N-terminal R10me2s peptide
分子名称: ASP-GLN-GLY-ARG-GLY-ARG-2MR-ARG-PRO-LEU-ASN, GH18329p
著者Zhang, Y.H, Huang, Y.
登録日2017-09-22
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.551 Å)
主引用文献Structural insights into the sequence-specific recognition of Piwi byDrosophilaPapi
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YGB
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BU of 5ygb by Molmil
Crystal structure of drosophila melanogaster Papi extended Tudor domain mutant - D287A
分子名称: GH18329p
著者Zhang, Y.H, Huang, Y.
登録日2017-09-22
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural insights into the sequence-specific recognition of Piwi byDrosophilaPapi
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

 

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