PDB: 34 件ウェブページステータス検索Chemie searchBIRD

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5UQ9	Crystal structure of 6-phosphogluconate dehydrogenase with ((4R,5R)-5-(hydroxycarbamoyl)-2,2-dimethyl-1,3-dioxolan-4-yl)methyl dihydrogen phosphate 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating, [(4R,5R)-5-(hydroxycarbamoyl)-2,2-dimethyl-1,3-dioxolan-4-yl]methyl dihydrogen phosphate 著者 Leonard, P.G. 登録日 2017-02-07 公開日 2018-08-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Functional Genomics Reveals Synthetic Lethality between Phosphogluconate Dehydrogenase and Oxidative Phosphorylation. Cell Rep, 26, 2019
8C79	Crystal structure of Leishmania donovani 6-Phosphogluconate Dehydrogenase complexed with NADPH 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Fritz-Wolf, K, Berneburg, I, Rahlfs, S, Becker, K. 登録日 2023-01-13 公開日 2023-05-24 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure of Leishmania donovani 6-Phosphogluconate Dehydrogenase and Inhibition by Phosphine Gold(I) Complexes: A Potential Approach to Leishmaniasis Treatment. Int J Mol Sci, 24, 2023
4E21	The crystal structure of 6-phosphogluconate dehydrogenase from Geobacter metallireducens 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 6-phosphogluconate dehydrogenase (Decarboxylating) 著者 Zhang, Z, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2012-03-07 公開日 2012-03-21 実験手法 X-RAY DIFFRACTION (2.301 Å) 主引用文献 The crystal structure of 6-phosphogluconate dehydrogenase from Geobacter metallireducens To be Published
3FWN	Dimeric 6-phosphogluconate dehydrogenase complexed with 6-phosphogluconate and 2'-monophosphoadenosine-5'-diphosphate 分子名称: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, ... 著者 Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J. 登録日 2009-01-19 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism J.Struct.Biol., 169, 2010
4GWG	Crystal Structure Analysis of 6-phosphogluconate dehydrogenase apo-form 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating 著者 He, C, Zhou, L, Zhang, L. 登録日 2012-09-03 公開日 2012-11-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.3907 Å) 主引用文献 Phosphoglycerate mutase 1 coordinates glycolysis and biosynthesis to promote tumor growth. Cancer Cell, 22, 2012
4GWK	Crystal structure of 6-phosphogluconate dehydrogenase complexed with 3-phosphoglyceric acid 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-PHOSPHOGLYCERIC ACID, 6-phosphogluconate dehydrogenase, ... 著者 He, C, Zhou, L, Zhang, L. 登録日 2012-09-03 公開日 2012-11-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.534 Å) 主引用文献 Phosphoglycerate mutase 1 coordinates glycolysis and biosynthesis to promote tumor growth. Cancer Cell, 22, 2012
6VPB	A novel membrane-bound 6-phosphogluconate dehydrogenase from the acetic acid bacteria Gluconacetobacter diazotrophicus (Gd6PGD) 分子名称: 6-phosphogluconate dehydrogenase, DI(HYDROXYETHYL)ETHER, ISOPROPYL ALCOHOL, ... 著者 Rodriguez-Romero, A, Rodriguez-Hernandez, A. 登録日 2020-02-02 公開日 2020-07-22 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 The structure of a novel membrane-associated 6-phosphogluconate dehydrogenase from Gluconacetobacter diazotrophicus (Gd6PGD) reveals a subfamily of short-chain 6PGDs. Febs J., 288, 2021
6XEQ	Crystal structure of the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans 分子名称: 6-phosphogluconate dehydrogenase, SULFATE ION 著者 Maturana, P, Roversi, P, Castro-Fernandez, V, Herrera-Morande, A, Garratt, R.C, Cabrera, R. 登録日 2020-06-13 公開日 2020-12-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Crystal structure of the 6-phosphogluconate dehydrogenase from Gluconobacter oxydans reveals tetrameric 6PGDHs as the crucial intermediate in the evolution of structure and cofactor preference in the 6PGDH family [version 1; peer review: 1 approved, 1 approved with reservations] Wellcome Open Res, 6, 2021
8I4N	Crystal strcuture of 6-phosphogluconate dehydrogenase from Corynebacterium glutamicum 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating 著者 Yu, H, Kim, K.-J. 登録日 2023-01-20 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum. J Microbiol Biotechnol., 33, 2023
8I4Q	Crystal structure of 6-phosphogluconate dehydrogenase from Corynebacterium glutamicum 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-phosphogluconate dehydrogenase, decarboxylating, ... 著者 Yu, H, Kim, K.-J. 登録日 2023-01-20 公開日 2023-07-26 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structures of 6-Phosphogluconate Dehydrogenase from Corynebacterium glutamicum. J Microbiol Biotechnol., 33, 2023
6FQY	Plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor NADP+ and in complex with its substrate 6-phosphogluconate 分子名称: 1,2-ETHANEDIOL, 6-phosphogluconate dehydrogenase, decarboxylating, ... 著者 Fritz-Wolf, K, Haeussler, K, Reichmann, M, Rahlfs, S, Becker, K. 登録日 2018-02-15 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Characterization of Plasmodium falciparum 6-Phosphogluconate Dehydrogenase as an Antimalarial Drug Target. J. Mol. Biol., 430, 2018
2P4Q	Crystal Structure Analysis of Gnd1 in Saccharomyces cerevisiae 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating 1, CITRATE ANION 著者 He, W, Wang, Y, Liu, W, Zhou, C.Z. 登録日 2007-03-12 公開日 2007-07-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 Crystal structure of Saccharomyces cerevisiae 6-phosphogluconate dehydrogenase Gnd1 Bmc Struct.Biol., 7, 2007
8IHE	Rv1122(gnd2) in Mycobacterium tuberculosis 分子名称: Probable 6-phosphogluconate dehydrogenase,decarboxylating Gnd2 著者 Chen, Y.J, Su, D. 登録日 2023-02-22 公開日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Rv1122(gnd2) in Mycobacterium tuberculosis To Be Published
6FQX	Plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor NADP+ and in complex with its substrate 6-phosphogluconate 分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, 6-phosphogluconate dehydrogenase, decarboxylating, ... 著者 Fritz-Wolf, K, Haeussler, K, Reichmann, M, Rahlfs, S, Becker, K. 登録日 2018-02-15 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Characterization of Plasmodium falciparum 6-Phosphogluconate Dehydrogenase as an Antimalarial Drug Target. J. Mol. Biol., 430, 2018
6FQZ	Plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor NADP+ and in complex with its substrate 6-phosphogluconate 分子名称: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating, ... 著者 Fritz-Wolf, K, Haeussler, K, Reichmann, M, Rahlfs, S, Becker, K. 登録日 2018-02-15 公開日 2018-08-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Characterization of Plasmodium falciparum 6-Phosphogluconate Dehydrogenase as an Antimalarial Drug Target. J. Mol. Biol., 430, 2018
2PGD	THE STRUCTURE OF 6-PHOSPHOGLUCONATE DEHYDROGENASE REFINED AT 2 ANGSTROMS RESOLUTION 分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, SULFATE ION 著者 Adams, M.J, Phillips, C, Gover, S. 登録日 1994-07-18 公開日 1995-02-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The structure of 6-phosphogluconate dehydrogenase refined at 2.5 A resolution. Acta Crystallogr.,Sect.B, 47, 1991
2ZYD	Dimeric 6-phosphogluconate dehydrogenase complexed with glucose 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating, D-glucose 著者 Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J. 登録日 2009-01-19 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism J.Struct.Biol., 169, 2010
2ZYG	Apo-form of dimeric 6-phosphogluconate dehydrogenase 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating 著者 Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J. 登録日 2009-01-21 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism J.Struct.Biol., 169, 2010
2ZYA	Dimeric 6-phosphogluconate dehydrogenase complexed with 6-phosphogluconate 分子名称: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating 著者 Chen, Y.-Y, Ko, T.-P, Lo, L.-P, Lin, C.-H, Wang, A.H.-J. 登録日 2009-01-19 公開日 2009-09-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Conformational changes associated with cofactor/substrate binding of 6-phosphogluconate dehydrogenase from Escherichia coli and Klebsiella pneumoniae: Implications for enzyme mechanism J.Struct.Biol., 169, 2010
2W8Z	Geobacillus stearothermophilus 6-phosphogluconate dehydrogenase with bound 6- phosphogluconate 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, ... 著者 Cameron, S, Hunter, W.N. 登録日 2009-01-20 公開日 2009-04-07 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Geobacillus Stearothermophilus 6-Phosphogluconate Dehydrogenase, Complexed with 6-Phosphogluconate. Acta Crystallogr.,Sect.F, 65, 2009
7CB0	The apo 6-phosphogluconate dehydrogenase from Staphylococcus aureus (strain Newman) 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating 著者 Wang, H, Wang, M, Sun, H. 登録日 2020-06-10 公開日 2021-04-07 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance. Nat Commun, 12, 2021
7CB5	The 6-phosphogluconate dehydrogenase from Staphylococcus aureus (6-phosphogluconate bound) 分子名称: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating 著者 Wang, H, Wang, M, Sun, H. 登録日 2020-06-10 公開日 2021-04-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance. Nat Commun, 12, 2021
7CB6	The silver-bound 6-phosphogluconate dehydrogenase from Staphylococcus aureus (strain Newman) 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating, SILVER ION 著者 Wang, H, Wang, M, Sun, H. 登録日 2020-06-10 公開日 2021-04-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Multi-target mode of action of silver against Staphylococcus aureus endows it with capability to combat antibiotic resistance. Nat Commun, 12, 2021
7CB2	The 6-phosphogluconate dehydrogenase (NADP-bound) from Staphylococcus aureus 分子名称: 6-phosphogluconate dehydrogenase, decarboxylating, CITRIC ACID, ... 著者 Wang, H, Wang, M, Sun, H. 登録日 2020-06-10 公開日 2021-06-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The 6-phosphogluconate dehydrogenase (NADP-bound) structures from Staphylococcus aureus To Be Published
1PGO	CRYSTALLOGRAPHIC STUDY OF COENZYME, COENZYME ANALOGUE AND SUBSTRATE BINDING IN 6-PHOSPHOGLUCONATE DEHYDROGENASE: IMPLICATIONS FOR NADP SPECIFICITY AND THE ENZYME MECHANISM 分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION 著者 Adams, M.J, Phillips, C, Gover, S. 登録日 1994-07-18 公開日 1995-02-27 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystallographic study of coenzyme, coenzyme analogue and substrate binding in 6-phosphogluconate dehydrogenase: implications for NADP specificity and the enzyme mechanism. Structure, 2, 1994

 

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