PDB: 334 件ウェブページステータス検索Chemie searchBIRD

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1CI7	TERNARY COMPLEX OF THYMIDYLATE SYNTHASE FROM PNEUMOCYSTIS CARINII 分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, PROTEIN (THYMIDYLATE SYNTHASE) 著者 Anderson, A.C, O'Neil, R.H, Delano, W.L, Stroud, R.M. 登録日 1999-04-08 公開日 2000-04-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The structural mechanism for half-the-sites reactivity in an enzyme, thymidylate synthase, involves a relay of changes between subunits. Biochemistry, 38, 1999
7TA9	Crystal Structure of thymidylate synthase from Acinetobacter baumannii 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2021-12-20 公開日 2022-01-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structure of thymidylate synthase from Acinetobacter baumannii to be published
3B9H	E. coli thymidylate synthase complexed with 5-NITRO-2'-DEOXY URIDINE 分子名称: 2'-DEOXY-5-NITROURIDINE 5'-MONOPHOSPHATE, PHOSPHATE ION, Thymidylate synthase 著者 Roberts, S.A, Montfort, W.R. 登録日 2007-11-05 公開日 2008-11-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Structural Studies of Early Events in the Thymidylate Synthase Reaction To be Published
5M4Z	Crystal structure of the complex of T.spiralis thymidylate synthase with N(4)-hydroxy-2'-deoxycytidine-5'-monophosphate, crystallized in the presence of N(5,10)-methylenetetrahydrofolate 分子名称: GLYCEROL, Thymidylate synthase, [(2~{R},3~{S},5~{R})-5-[(4~{E})-4-hydroxyimino-2-oxidanylidene-1,3-diazinan-1-yl]-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate 著者 Wilk, P, Maj, P, Jarmula, A, Dowiercial, A, Rode, W. 登録日 2016-10-19 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.179 Å) 主引用文献 Molecular Mechanism of Thymidylate Synthase Inhibition by N 4 -Hydroxy-dCMP in View of Spectrophotometric and Crystallographic Studies. Int J Mol Sci, 22, 2021
4TMS	PLASTIC ADAPTATION TOWARD MUTATIONS IN PROTEINS: STRUCTURAL COMPARISON OF THYMIDYLATE SYNTHASES 分子名称: PHOSPHATE ION, THYMIDYLATE SYNTHASE 著者 Finer-Moore, J, Stroud, R. 登録日 1992-01-07 公開日 1992-01-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Plastic adaptation toward mutations in proteins: structural comparison of thymidylate synthases. Proteins, 8, 1990
6Y08	Mouse thymidylate synthase cocrystallized with dUMP and soaked in sulfamethoxazole 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Sulfamethoxazole, Thymidylate synthase 著者 Maj, P, Jarmula, A, Wilk, P, Weiss, M.S, Rode, W. 登録日 2020-02-06 公開日 2021-02-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.297 Å) 主引用文献 Mouse thymidylate synthase cocrystallized with dUMP and soaked in sulfamethoxazole To Be Published
4UP1	Crystal structure of native human Thymidylate synthase in active form 分子名称: SULFATE ION, THYMIDYLATE SYNTHASE 著者 Deschamps, P, Rety, S, Leulliot, N. 登録日 2014-06-11 公開日 2015-06-24 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.991 Å) 主引用文献 Crystal structure of the active form of native human thymidylate synthase in the absence of bound substrates. Acta Crystallogr F Struct Biol Commun, 73, 2017
5NOO	Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, TOMUDEX, Thymidylate synthase 著者 Wilk, P, Jarmula, A, Maj, P, Dowiercial, A, Banaszak, K, Rypniewski, W, Rode, W. 登録日 2017-04-12 公開日 2017-05-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS. J. Mol. Graph. Model., 77, 2017
6ZXO	Crystal structure of His-tagged human thymidylate synthase (HT-hTS) in complex with FdUMP and Raltitrexed (Tomudex) 分子名称: 1,2-ETHANEDIOL, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, TOMUDEX, ... 著者 Pozzi, C, Mangani, S. 登録日 2020-07-30 公開日 2021-05-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural Bases for the Synergistic Inhibition of Human Thymidylate Synthase and Ovarian Cancer Cell Growth by Drug Combinations. Cancers (Basel), 13, 2021
7XYJ	Structure of WSSV thymidylate synthase in complex with dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PENTAETHYLENE GLYCOL, ... 著者 Ma, Q, Liu, C, Zang, K. 登録日 2022-06-01 公開日 2023-06-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.275 Å) 主引用文献 Structure of WSSV thymidylate synthase in complex with dUMP To Be Published
7XYK	Structure of WSSV thymidylate synthase in complex with dUMP and raltitrexed 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, SULFATE ION, TOMUDEX, ... 著者 Ma, Q, Liu, C, Zang, K. 登録日 2022-06-01 公開日 2023-06-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.433 Å) 主引用文献 Structure of WSSV thymidylate synthase in complex with dUMP and raltitrexed To Be Published
6F6Z	Mouse Thymidylate Synthase Cocrystallized with N(4)OHdCMP and Soaked in Methylenetetrahydrofolate 分子名称: (2~{S})-2-[[4-[[(6~{R})-2-azanyl-4-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-pteridin-6-yl]methyl-methyl-amino]phenyl]carbonylamino]pentanedioic acid, 2'-deoxy-N-hydroxycytidine 5'-(dihydrogen phosphate), Thymidylate synthase 著者 Wilk, P, Jarmula, A, Maj, P, Rode, W. 登録日 2017-12-06 公開日 2019-01-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.127 Å) 主引用文献 Molecular Mechanism of Thymidylate Synthase Inhibition by N4-Hydroxy-dCMP in View of Spectrophotometric and Crystallographic Studies Int J Mol Sci, 22, 2021
6GKO	Mouse thymidylate synthase cocrystallized with dUMP and soaked in phenolphthalein 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3,3-bis(4-hydroxyphenyl)-2-benzofuran-1-one, DIMETHYL SULFOXIDE, ... 著者 Maj, P, Wilk, P, Jarmula, A, Weiss, M.S, Rode, W. 登録日 2018-05-21 公開日 2019-06-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.839 Å) 主引用文献 Thymidylate synthase fragment screening To Be Published
6GYJ	Mouse thymidylate synthase crystal soaked in phenolphthalein 分子名称: 3,3-bis(4-hydroxyphenyl)-2-benzofuran-1-one, DIMETHYL SULFOXIDE, SULFATE ION, ... 著者 Maj, P, Jarmula, A, Wilk, P, Weiss, M.S, Rode, W. 登録日 2018-06-30 公開日 2019-08-28 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Thymidylate synthase fragment screening To be published
5HS3	Human thymidylate synthase complexed with dUMP and 3-amino-2-benzoyl-4-methylthieno[2,3-b]pyridin-6-ol 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 3-amino-2-benzoyl-4-methylthieno[2,3-b]pyridin-6-ol, Thymidylate synthase 著者 Chen, D, Almqvist, H, Axelsson, H, Jafari, R, Mateus, A, Haraldsson, M, Larsson, A, Artursson, P, Molina, D.M, Lundback, T, Nordlund, P. 登録日 2016-01-25 公開日 2016-02-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.103 Å) 主引用文献 CETSA screening identifies known and novel thymidylate synthase inhibitors and slow intracellular activation of 5-fluorouracil Nat Commun, 7, 2016
5J7W	Enterococcus faecalis thymidylate synthase complex with methotrexate 分子名称: METHOTREXATE, SULFATE ION, Thymidylate synthase 著者 Mangani, S, Pozzi, C. 登録日 2016-04-07 公開日 2016-09-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 X-ray crystal structures of Enterococcus faecalis thymidylate synthase with folate binding site inhibitors. Eur.J.Med.Chem., 123, 2016
5JNH	Crystal Structure of cytidine monophosphate hydroxymethylase MilA 分子名称: CMP 5-hydroxymethylase 著者 Zhao, G, He, X. 登録日 2016-04-30 公開日 2017-01-25 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.202 Å) 主引用文献 Structural basis of the substrate preference towards CMP for a thymidylate synthase MilA involved in mildiomycin biosynthesis Sci Rep, 6, 2016
5FCT	Mouse thymidylate synthase in ternary complex with FdUMP and methylenetetrahydrofolate. 分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, Thymidylate synthase 著者 Dowiercial, A, Wilk, P, Jarmula, A, Rode, W. 登録日 2015-12-15 公開日 2016-10-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme Struct Chem, 2016
5JP9	Crystal Structure of cytidine monophosphate hydroxymethylase MilA with dCMP 分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, CMP 5-hydroxymethylase 著者 Zhao, G, He, X. 登録日 2016-05-03 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.101 Å) 主引用文献 Structural basis of the substrate preference towards CMP for a thymidylate synthase MilA involved in mildiomycin biosynthesis Sci Rep, 6, 2016
5H38	Structural analysis of KSHV thymidylate synthase 分子名称: ORF70, PHOSPHATE ION 著者 Choi, Y.M, Yeo, H.K, Park, Y.W, Lee, J.Y. 登録日 2016-10-21 公開日 2017-01-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Analysis of Thymidylate Synthase from Kaposi's Sarcoma-Associated Herpesvirus with the Anticancer Drug Raltitrexed. PLoS ONE, 11, 2016
5H3A	Structural analysis of KSHV thymidylate synthase 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ORF70, TOMUDEX 著者 Choi, Y.M, Yeo, H.K, Park, Y.W, Lee, J.Y. 登録日 2016-10-21 公開日 2017-01-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Analysis of Thymidylate Synthase from Kaposi's Sarcoma-Associated Herpesvirus with the Anticancer Drug Raltitrexed. PLoS ONE, 11, 2016
5H39	Structural analysis of KSHV thymidylate synthase 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ORF70 著者 Choi, Y.M, Yeo, H.K, Park, Y.W, Lee, J.Y. 登録日 2016-10-21 公開日 2017-01-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Analysis of Thymidylate Synthase from Kaposi's Sarcoma-Associated Herpesvirus with the Anticancer Drug Raltitrexed. PLoS ONE, 11, 2016
4LRR	Ternary complex between E. coli thymidylate synthase, dUMP, and F9 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2-oxo-2H-naphtho[1,8-bc]furan-6-yl 4-nitrobenzoate, SULFATE ION, ... 著者 Mangani, S, Pozzi, C, Ferrari, S, Costi, M.P. 登録日 2013-07-20 公開日 2013-11-06 最終更新日 2013-12-11 実験手法 X-RAY DIFFRACTION (2.41 Å) 主引用文献 2'-Deoxyuridine 5'-Monophosphate Substrate Displacement in Thymidylate Synthase through 6-Hydroxy-2H-naphtho[1,8-bc]furan-2-one Derivatives. J.Med.Chem., 56, 2013
4O1X	Crystal structure of human thymidylate synthase double mutant C195S-Y202C 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ... 著者 Pozzi, C, Mangani, S. 登録日 2013-12-16 公開日 2015-01-21 最終更新日 2023-03-01 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Destabilizers of the thymidylate synthase homodimer accelerate its proteasomal degradation and inhibit cancer growth. Elife, 11, 2022
4O1U	Crystal structure of human thymidylate synthase mutant Y202C 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ... 著者 Pozzi, C, Mangani, S. 登録日 2013-12-16 公開日 2015-01-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Destabilizers of the thymidylate synthase homodimer accelerate its proteasomal degradation and inhibit cancer growth. Elife, 11, 2022

 

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