PDB: 96 件ウェブページステータス検索Chemie searchBIRD

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4LIJ	Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution 分子名称: Far upstream element-binding protein 1, PHOSPHATE ION 著者 Joint Center for Structural Genomics (JCSG), Partnership for T-Cell Biology, Partnership for T-Cell Biology (TCELL) 登録日 2013-07-02 公開日 2013-11-27 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a far upstream element (FUSE) binding protein 1 (FUBP1) from Homo sapiens at 1.95 A resolution To be published
8COO	Solution structure of Zipcode binding protein 1 (ZBP1) KH3(DD)KH4 domains in complex with N6-Methyladenosine containing RNA 分子名称: Insulin-like growth factor 2 mRNA-binding protein 1, RNA_(5'-R(*(UP*CP*GP*GP*(6MZ)P*CP*U)-3') 著者 Nicastro, G, Abis, G, Taylor, I.A, Ramos, A. 登録日 2023-02-28 公開日 2024-02-07 実験手法 SOLUTION NMR 主引用文献 Direct m6A recognition by IMP1 underlays an alternative model of target selection for non-canonical methyl-readers. Nucleic Acids Res., 51, 2023
7CRE	hnRNPK KH3 domain in complex with a ssDNA fragment from the SIRLOIN element 分子名称: Heterogeneous nuclear ribonucleoprotein K, SODIUM ION, ssDNA fragment 著者 Yao, J, Sun, Q. 登録日 2020-08-13 公開日 2021-12-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Nuclear import receptors and hnRNPK mediates nuclear import and stress granule localization of SIRLOIN. Cell.Mol.Life Sci., 78, 2021
3KRM	Imp1 kh34 分子名称: GLYCEROL, Insulin-like growth factor 2 mRNA-binding protein 1 著者 Chao, J.A, Singer, R.H, Almo, S.C, Patskovsky, Y. 登録日 2009-11-18 公開日 2010-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 ZBP1 recognition of beta-actin zipcode induces RNA looping. Genes Dev., 24, 2010
4WAL	Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A 分子名称: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ... 著者 Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S. 登録日 2014-08-29 公開日 2014-12-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna, 21, 2015
4WAN	Crystal structure of Msl5 protein in complex with RNA at 1.8 A 分子名称: ACETATE ION, Branchpoint-bridging protein, GLYCEROL, ... 著者 Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S. 登録日 2014-08-29 公開日 2014-12-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna, 21, 2015
3VKE	Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides 分子名称: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1 著者 Traore, D.A.K, Wilce, M.C.J, Wilce, J.A. 登録日 2011-11-15 公開日 2012-02-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides Nucleic Acids Res., 40, 2012
6QEY	IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties 分子名称: ACETONITRILE, Insulin-like growth factor 2 mRNA-binding protein 1, PHOSPHATE ION 著者 Dagil, R, Ball, N.J, Ogrodowicz, R.W, Purkiss, A.G, Taylor, I.A, Ramos, A. 登録日 2019-01-09 公開日 2019-03-27 最終更新日 2019-09-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 IMP1 KH1 and KH2 domains create a structural platform with unique RNA recognition and re-modelling properties. Nucleic Acids Res., 47, 2019
6Y2D	Crystal structure of the second KH domain of FUBP1 分子名称: Far upstream element-binding protein 1, GLYCEROL, SULFATE ION 著者 Ni, X, Chaikuad, A, Joerger, A.C, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2020-02-15 公開日 2020-03-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Comparative structural analyses and nucleotide-binding characterization of the four KH domains of FUBP1. Sci Rep, 10, 2020
6Y2C	Crystal structure of the third KH domain of FUBP1 分子名称: 1,2-ETHANEDIOL, Far upstream element-binding protein 1, ZINC ION 著者 Ni, X, Joerger, A.C, Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2020-02-15 公開日 2020-03-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Comparative structural analyses and nucleotide-binding characterization of the four KH domains of FUBP1. Sci Rep, 10, 2020
6Y24	Crystal structure of fourth KH domain of FUBP1 分子名称: 1,2-ETHANEDIOL, Far upstream element-binding protein 1 著者 Ni, X, Joerger, A.C, Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2020-02-14 公開日 2020-03-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Comparative structural analyses and nucleotide-binding characterization of the four KH domains of FUBP1. Sci Rep, 10, 2020
6ROL	Structure of IMP2 KH34 domains 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Insulin-like growth factor 2 mRNA-binding protein 2, ... 著者 Bhaskar, V, Biswas, J, Singer, R.H, Chao, J.A. 登録日 2019-05-13 公開日 2019-10-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structural basis for RNA selectivity by the IMP family of RNA-binding proteins. Nat Commun, 10, 2019
6FBL	NMR Solution Structure of MINA-1(254-334) 分子名称: MINA-1 著者 Michel, E, Allain, F. 登録日 2017-12-19 公開日 2019-01-30 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 MINA-1 and WAGO-4 are part of regulatory network coordinating germ cell death and RNAi in C. elegans. Cell Death Differ., 26, 2019
6GQE	X-ray structure of KH1-2 domain of IMP3 分子名称: Insulin-like growth factor 2 mRNA-binding protein 3 著者 Janowski, R, Schlundt, A, Sattler, M, Niessing, D. 登録日 2018-06-07 公開日 2019-04-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Combinatorial recognition of clustered RNA elements by the multidomain RNA-binding protein IMP3. Nat Commun, 10, 2019
5WWX	Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C complex with RNA 分子名称: NICKEL (II) ION, RNA (5'-R(P*AP*GP*AP*GP*U)-3'), RNA-binding E3 ubiquitin-protein ligase MEX3C 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
5WWW	Crystal structure of the KH1 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C complex with RNA 分子名称: RNA (5'-R(*GP*UP*UP*UP*AP*G)-3'), RNA-binding E3 ubiquitin-protein ligase MEX3C 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.798 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
5WWZ	Crystal structure of the KH2 domain of human RNA-binding E3 ubiquitin-protein ligase MEX-3C 分子名称: RNA-binding E3 ubiquitin-protein ligase MEX3C, SULFATE ION 著者 Yang, L, Wang, C, Li, F, Gong, Q. 登録日 2017-01-05 公開日 2017-08-23 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The human RNA-binding protein and E3 ligase MEX-3C binds the MEX-3-recognition element (MRE) motif with high affinity J. Biol. Chem., 292, 2017
1J5K	COMPLEX OF THE KH3 DOMAIN OF HNRNP K WITH A SINGLE_STRANDED 10MER DNA OLIGONUCLEOTIDE 分子名称: 5'-D(*AP*TP*AP*T*TP*CP*CP*CP*TP*C)-3', Heterogeneous nuclear ribonucleoprotein K 著者 Clore, G.M, Braddock, D.T. 登録日 2002-05-13 公開日 2002-07-10 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Molecular basis of sequence-specific single-stranded DNA recognition by KH domains: solution structure of a complex between hnRNP K KH3 and single-stranded DNA. EMBO J., 21, 2002
4B8T	RNA BINDING PROTEIN Solution structure of the third KH domain of KSRP in complex with the G-rich target sequence. 分子名称: 5'-R(*AP*GP*GP*GP*UP)-3', KH-TYPE SPLICING REGULATORY PROTEIN 著者 Nicastro, G, Garcia-Mayoral, M.F, Hollingworth, D, Kelly, G, Martin, S.R, Briata, P, Gherzi, R, Ramos, A. 登録日 2012-08-30 公開日 2012-11-07 最終更新日 2013-01-16 実験手法 SOLUTION NMR 主引用文献 Noncanonical G Recognition Mediates Ksrp Regulation of Let-7 Biogenesis Nat.Struct.Mol.Biol., 19, 2012
1J4W	COMPLEX OF THE KH3 and KH4 DOMAINS OF FBP WITH A SINGLE_STRANDED 29mer DNA OLIGONUCLEOTIDE FROM THE FUSE ELEMENT OF THE C-MYC ONCOGENE 分子名称: DNA (5'-D(*GP*TP*A*TP*AP*TP*TP*CP*CP*CP*TP*CP*GP*GP*G*AP*TP*TP*TP*TP*TP*TP*AP*TP*TP*TP*TP*GP*T)-3'), FUSE binding protein 著者 Clore, G.M, Braddock, D.T. 登録日 2001-11-30 公開日 2002-03-06 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of KH domains from FBP bound to single-stranded DNA. Nature, 415, 2002
1K1G	STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1 分子名称: 5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3', SF1-Bo isoform 著者 Liu, Z, Luyten, I, Bottomley, M.J, Messias, A.C, Houngninou-Molango, S, Sprangers, R, Zanier, K, Kramer, A, Sattler, M. 登録日 2001-09-25 公開日 2001-11-07 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Structural basis for recognition of the intron branch site RNA by splicing factor 1. Science, 294, 2001
1KHM	C-TERMINAL KH DOMAIN OF HNRNP K (KH3) 分子名称: PROTEIN (HNRNP K) 著者 Baber, J, Libutti, D, Levens, D, Tjandra, N. 登録日 1999-01-07 公開日 2000-01-12 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 High precision solution structure of the C-terminal KH domain of heterogeneous nuclear ribonucleoprotein K, a c-myc transcription factor. J.Mol.Biol., 289, 1999
2FMR	KH1 FROM THE FRAGILE X PROTEIN FMR1, NMR, 18 STRUCTURES 分子名称: FMR1 PROTEIN 著者 Musco, G, Kharrat, A, Stier, G, Fraternali, F, Gibson, T.J, Nilges, M, Pastore, A. 登録日 1997-10-06 公開日 1998-04-08 最終更新日 2022-03-09 実験手法 SOLUTION NMR 主引用文献 The solution structure of the first KH domain of FMR1, the protein responsible for the fragile X syndrome. Nat.Struct.Biol., 4, 1997
1DT4	CRYSTAL STRUCTURE OF NOVA-1 KH3 K-HOMOLOGY RNA-BINDING DOMAIN 分子名称: NEURO-ONCOLOGICAL VENTRAL ANTIGEN 1 著者 Lewis, H.A, Chen, H, Edo, C, Buckanovich, R.J, Yang, Y.Y.L. 登録日 2000-01-11 公開日 2000-02-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal structures of Nova-1 and Nova-2 K-homology RNA-binding domains. Structure Fold.Des., 7, 1999
1DTJ	CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN 分子名称: RNA-BINDING NEUROONCOLOGICAL VENTRAL ANTIGEN 2 著者 Lewis, H.A, Chen, H, Edo, C, Buckanovich, R.J, Yang, Y.Y.L, Musunuru, K, Zhong, R, Darnell, R.B, Burley, S.K. 登録日 2000-01-12 公開日 2000-02-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of Nova-1 and Nova-2 K-homology RNA-binding domains. Structure Fold.Des., 7, 1999

 

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