PDB: 100 件ウェブページステータス検索Chemie searchBIRD

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5CIU	Structural basis of the recognition of H3K36me3 by DNMT3B PWWP domain 分子名称: DNA (cytosine-5)-methyltransferase 3B, GLYCEROL, Histone H3.2 著者 Rondelet, G, DAL MASO, T, Willems, L, Wouters, J. 登録日 2015-07-13 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B. J.Struct.Biol., 194, 2016
5CIY	Structural basis of the recognition of H3K36me3 by DNMT3B PWWP domain 分子名称: DNA (5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(3DR)P*GP*CP*AP*TP*GP*G)-3'), Modification methylase HhaI, ... 著者 Rondelet, G, DAL MASO, T, Willems, L, Wouters, J. 登録日 2015-07-13 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.594 Å) 主引用文献 Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B. J.Struct.Biol., 194, 2016
4HCZ	PHF1 Tudor in complex with H3K36me3 分子名称: H3L-like histone, PHD finger protein 1 著者 Musselman, C.A, Roy, S, Nunez, J, Kutateladze, T.G. 登録日 2012-10-01 公開日 2012-11-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1. Nat.Struct.Mol.Biol., 19, 2012
7YI1	Cryo-EM structure of Eaf3 CHD bound to H3K36me3 nucleosome 分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI4	Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state 分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI5	Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state 分子名称: Chromatin modification-related protein EAF3, Histone H2A, Histone H2B 1.1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.96 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
6IIS	Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide 分子名称: 16-bp TA-rich DNA, H3K36me3 peptide, Hepatoma-derived growth factor-related protein 3 著者 Wang, Z, Tian, W. 登録日 2018-10-07 公開日 2019-04-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.358 Å) 主引用文献 Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide Nucleic Acids Res., 2019
2X4X	Molecular basis of Histone H3K36me3 recognition by the PWWP domain of BRPF1. 分子名称: HISTONE H3.2, PEREGRIN, SULFATE ION 著者 Vezzoli, A, Bonadies, N, Allen, M.D, Freund, S.M.V, Santiveri, C.M, Kvinlaug, B, Huntly, B.J.P, Gottgens, B, Bycroft, M. 登録日 2010-02-02 公開日 2010-04-21 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1. Nat.Struct.Mol.Biol., 17, 2010
2X35	Molecular basis of Histone H3K36me3 recognition by the PWWP domain of BRPF1. 分子名称: PEREGRIN 著者 Vezzoli, A, Bonadies, N, Allen, M.D, Freund, S.M.V, Santiveri, C.M, Kvinlaug, B, Huntly, B.J.P, Gottgens, B, Bycroft, M. 登録日 2010-01-21 公開日 2010-02-02 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1. Nat.Struct.Mol.Biol., 17, 2010
2X4W	Molecular basis of Histone H3K36me3 recognition by the PWWP domain of BRPF1. 分子名称: FORMIC ACID, HISTONE H3.2, PEREGRIN 著者 Vezzoli, A, Bonadies, N, Allen, M.D, Freund, S.M.V, Santiveri, C.M, Kvinlaug, B, Huntly, B.J.P, Gottgens, B, Bycroft, M. 登録日 2010-02-02 公開日 2010-04-21 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1. Nat.Struct.Mol.Biol., 17, 2010
2X4Y	Molecular basis of Histone H3K36me3 recognition by the PWWP domain of BRPF1. 分子名称: HISTONE H3.2, PEREGRIN, SULFATE ION 著者 Vezzoli, A, Bonadies, N, Allen, M.D, Freund, S.M.V, Santiveri, C.M, Kvinlaug, B, Huntly, B.J.P, Gottgens, B, Bycroft, M. 登録日 2010-02-02 公開日 2010-04-21 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1. Nat.Struct.Mol.Biol., 17, 2010
2M0O	The solution structure of human PHF1 in complex with H3K36me3 分子名称: H3K36me3 peptide, PHD finger protein 1 著者 Song, J, Patel, D.J. 登録日 2012-10-30 公開日 2013-01-16 最終更新日 2013-02-27 実験手法 SOLUTION NMR 主引用文献 An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting. Mol.Cell, 49, 2013
7LKY	Crystal Structure of PHF1 Tudor domain in complex with a peptidomimetic ligand UNC6641 分子名称: DIMETHYL SULFOXIDE, Isoform 1 of PHD finger protein 1, Peptidomimetic inhibitor UNC6641, ... 著者 Liu, J, Kutateladze, T.G. 登録日 2021-02-03 公開日 2021-12-15 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Discovery of an H3K36me3-Derived Peptidomimetic Ligand with Enhanced Affinity for Plant Homeodomain Finger Protein 1 (PHF1). J.Med.Chem., 64, 2021
4PLI	Structure of the chromodomain of MRG2 in complex with H3K36me3 分子名称: At1g02740, H3K36me3 著者 Liu, Y, Huang, Y. 登録日 2014-05-18 公開日 2015-07-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.651 Å) 主引用文献 Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression. Plos Genet., 10, 2014
4PLL	Structure of the chromodaomain of MRG2 in complex with H3K36me3 分子名称: At1g02740, H3K36me3 著者 Liu, Y, Huang, Y. 登録日 2014-05-18 公開日 2015-07-22 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression. Plos Genet., 10, 2014
7YI2	Cryo-EM structure of Rpd3S in loose-state Rpd3S-NCP complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI3	Cryo-EM structure of Rpd3S in close-state Rpd3S-NCP complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
7YI0	Cryo-EM structure of Rpd3S complex 分子名称: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ... 著者 Li, H.T, Yan, C.Y, Guan, H.P, Wang, P. 登録日 2022-07-14 公開日 2023-06-14 最終更新日 2023-08-30 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature, 620, 2023
6J0D	Crystal structure of OsSUF4 分子名称: ZINC ION, transcription factor 著者 Wang, B, Luo, Q. 登録日 2018-12-24 公開日 2019-11-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment. Nat Commun, 10, 2019
6WAV	Crystal structure of PHF1 in complex with H3K36me3 substitution 分子名称: Histone H3.1, PHD finger protein 1, SULFATE ION, ... 著者 Dong, C, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Structural Genomics Consortium (SGC) 登録日 2020-03-26 公開日 2020-08-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for histone variant H3tK27me3 recognition by PHF1 and PHF19. Elife, 9, 2020
4QXB	crystal structure of histone demethylase KDM2A-H3K36ME3 with NOG 分子名称: Histone H3.2, Lysine-specific demethylase 2A, N-OXALYLGLYCINE, ... 著者 Cheng, Z.J, Patel, D.J. 登録日 2014-07-19 公開日 2014-11-05 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A molecular threading mechanism underlies Jumonji lysine demethylase KDM2A regulation of methylated H3K36. Genes Dev., 28, 2014
4QX8	Crystal structure of histone demethylase kdm2a-h3k36me3 complex with alpha-kg 分子名称: 2-OXOGLUTARIC ACID, Histone H3.2, Lysine-specific demethylase 2A, ... 著者 Cheng, Z.J, Patel, D.J. 登録日 2014-07-19 公開日 2014-11-05 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 A molecular threading mechanism underlies Jumonji lysine demethylase KDM2A regulation of methylated H3K36. Genes Dev., 28, 2014
4NS5	Crystal structure of human BS69 Bromo-Zinc finger-PWWP 分子名称: ZINC ION, Zinc finger MYND domain-containing protein 11 著者 Wang, J.C, Qin, S, Li, F.D, Li, S, Zhang, W, Wu, J.H, Shi, Y.Y. 登録日 2013-11-28 公開日 2014-04-09 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding. Cell Res., 24, 2014
8PC6	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-09 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
8PC5	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-09 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.02 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023

 

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