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4Y2W
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BU of 4y2w by Molmil
Crystal structure of a thermostable alanine racemase from Thermoanaerobacter tengcongensis MB4
Descriptor: ALANINE, Alanine racemase 1, PHOSPHATE ION
Authors:Xu, X, Ju, J, Dong, H.
Deposit date:2015-02-10
Release date:2015-09-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Thermostable Alanine Racemase from Thermoanaerobacter tengcongensis MB4 Reveals the Role of Gln360 in Substrate Selection
Plos One, 10, 2015
7AGZ
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BU of 7agz by Molmil
BsrV no-histagged
Descriptor: Broad specificity amino-acid racemase, CHLORIDE ION, GLYCEROL, ...
Authors:Carrasco-Lopez, C, Rojas-Altuve, A, Espaillat, A, Cava, F, Hermoso, J.A.
Deposit date:2020-09-23
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Binding of non-canonical peptidoglycan controls Vibrio cholerae broad spectrum racemase activity.
Comput Struct Biotechnol J, 19, 2021
5IRP
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BU of 5irp by Molmil
Crystal structure of the alanine racemase Bsu17640 from Bacillus subtilis
Descriptor: (5-hydroxy-6-methylpyridin-3-yl)methyl dihydrogen phosphate, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alanine racemase 2, ...
Authors:Bernardo-Garcia, N, Gago, F, Hermoso, J.A.
Deposit date:2016-03-14
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase.
Org.Biomol.Chem., 17, 2019
1BD0
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BU of 1bd0 by Molmil
ALANINE RACEMASE COMPLEXED WITH ALANINE PHOSPHONATE
Descriptor: ALANINE RACEMASE, {1-[(3-HYDROXY-METHYL-5-PHOSPHONOOXY-METHYL-PYRIDIN-4-YLMETHYL)-AMINO]-ETHYL}-PHOSPHONIC ACID
Authors:Stamper, G.F, Morollo, A.A, Ringe, D.
Deposit date:1998-05-12
Release date:1998-10-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Reaction of alanine racemase with 1-aminoethylphosphonic acid forms a stable external aldimine.
Biochemistry, 37, 1998
7XLL
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BU of 7xll by Molmil
Alanine racemase from Lactobacillus sakei Uonuma-1.
Descriptor: ACETATE ION, ALANINE, Alanine racemase, ...
Authors:Shimizu-Ibuka, A, Kato, Y.
Deposit date:2022-04-22
Release date:2023-03-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Regulation of alanine racemase activity by carboxylates and the d-type substrate d-alanine.
Febs J., 290, 2023
2DY3
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BU of 2dy3 by Molmil
Crystal Structure of alanine racemase from Corynebacterium glutamicum
Descriptor: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE
Authors:Miyaguchi, I, Sasaki, C, Kato, R, Oikawa, T, Sugio, S.
Deposit date:2006-09-05
Release date:2007-09-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Alanine Racemase from Corynebacterium glutamicum at 2.1 A resolution
To be Published
6Q72
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BU of 6q72 by Molmil
Crystal structure of the alanine racemase from Bacillus subtilis in the presence of only PEG 4000 and Magnesium chloride in the crystallization condition
Descriptor: Alanine racemase 2, CHLORIDE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Bernardo-Garcia, N, Gago, F, Hermoso, J.A.
Deposit date:2018-12-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase.
Org.Biomol.Chem., 17, 2019
8AHW
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BU of 8ahw by Molmil
Structure of DCS-resistant variant D322N of alanine racemase from Mycobacterium tuberculosis
Descriptor: 1,2-ETHANEDIOL, Alanine racemase, GLYCEROL
Authors:de Chiara, C, Prosser, G, Ogrodowicz, R.W, de Carvalho, L.P.S.
Deposit date:2022-07-22
Release date:2023-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structure of the d-Cycloserine-Resistant Variant D322N of Alanine Racemase from Mycobacterium tuberculosis .
Acs Bio Med Chem Au, 3, 2023
4FS9
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BU of 4fs9 by Molmil
Complex structure of a broad specificity amino acid racemase (Bar) within the reactive intermediate
Descriptor: Broad specificity amino acid racemase, N~2~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-LYSINE
Authors:Wang, W.C, Wu, H.M.
Deposit date:2012-06-27
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of lysine-preferred racemases, the non-antibiotic selectable markers for transgenic plants
Plos One, 7, 2012
8B8H
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Structure of DCS-resistant variant D322N of alanine racemase from M. tuberculosis in complex with DCS
Descriptor: (~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium, 1,2-ETHANEDIOL, Alanine racemase, ...
Authors:de Chiara, C, Prosser, G, Ogrodowicz, R.W, de Carvalho, L.P.S.
Deposit date:2022-10-04
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of the d-Cycloserine-Resistant Variant D322N of Alanine Racemase from Mycobacterium tuberculosis .
Acs Bio Med Chem Au, 3, 2023
1EPV
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BU of 1epv by Molmil
ALANINE RACEMASE WITH BOUND INHIBITOR DERIVED FROM D-CYCLOSERINE
Descriptor: ALANINE RACEMASE, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Authors:Fenn, T.D, Stamper, G.F, Morollo, A.A, Ringe, D.
Deposit date:2000-03-29
Release date:2003-01-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A side reaction of alanine racemase: transamination of cycloserine.
Biochemistry, 42, 2003
4WR3
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BU of 4wr3 by Molmil
Y274F alanine racemase from E. coli
Descriptor: Alanine racemase, biosynthetic, GLYCEROL, ...
Authors:Squire, C.J, Yosaatmadja, Y, Patrick, W.M.
Deposit date:2014-10-23
Release date:2015-11-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic and Evolutionary Insights from the Reciprocal Promiscuity of Two Pyridoxal Phosphate-dependent Enzymes.
J.Biol.Chem., 291, 2016
4XBJ
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BU of 4xbj by Molmil
Y274F alanine racemase from E. coli inhibited by l-ala-p
Descriptor: Alanine racemase, biosynthetic, SULFATE ION, ...
Authors:Squire, C.J, Yosaatmadja, Y, Patrick, W.M.
Deposit date:2014-12-17
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanistic and Evolutionary Insights from the Reciprocal Promiscuity of Two Pyridoxal Phosphate-dependent Enzymes.
J.Biol.Chem., 291, 2016
6SCZ
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BU of 6scz by Molmil
Mycobacterium tuberculosis alanine racemase inhibited by DCS
Descriptor: (~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylidene-[(4~{R})-3-oxidanylidene-1,2-oxazolidin-4-yl]azanium, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:de Chiara, C, Purkiss, A, Prosser, G, Homsak, M, de Carvalho, L.P.S.
Deposit date:2019-07-26
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:D-Cycloserine destruction by alanine racemase and the limit of irreversible inhibition.
Nat.Chem.Biol., 16, 2020
3OO2
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BU of 3oo2 by Molmil
2.37 Angstrom resolution crystal structure of an alanine racemase (alr) from Staphylococcus aureus subsp. aureus COL
Descriptor: Alanine racemase 1, BETA-MERCAPTOETHANOL, PHOSPHATE ION, ...
Authors:Halavaty, A.S, Shuvalova, L, Minasov, G, Winsor, J, Dubrovska, I, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-08-30
Release date:2010-10-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:2.37 Angstrom resolution crystal structure of an alanine racemase (alr) from Staphylococcus aureus subsp. aureus COL
TO BE PUBLISHED
3UW6
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BU of 3uw6 by Molmil
Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR120
Descriptor: Alanine racemase
Authors:Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-11-30
Release date:2012-02-08
Last modified:2022-03-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Computational design of enone-binding proteins with catalytic activity for the Morita-Baylis-Hillman reaction.
Acs Chem.Biol., 8, 2013
1FTX
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BU of 1ftx by Molmil
Crystal structure of alanine racemase in complex with D-alanine phosphonate
Descriptor: (1S)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]ETHYLPHOSPHONIC ACID, ALANINE RACEMASE
Authors:Stamper, G.F, Ringe, D.
Deposit date:2000-09-13
Release date:2003-01-14
Last modified:2017-02-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:

4ILS
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BU of 4ils by Molmil
Crystal structure of engineered protein. northeast structural genomics Consortium target or117
Descriptor: Engineered protein
Authors:Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-12-31
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of engineered protein. northeast structural genomics Consortium target or117
To be Published
6Q70
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BU of 6q70 by Molmil
Crystal structure of the alanine racemase Bsu17640 from Bacillus subtilis in the presence of HEPES
Descriptor: Alanine racemase 2, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bernardo-Garcia, N, Gago, F, Hermoso, J.A.
Deposit date:2018-12-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase.
Org.Biomol.Chem., 17, 2019
6Q71
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BU of 6q71 by Molmil
Crystal structure of the alanine racemase Bsu17640 from Bacillus subtilis in the presence of Bis-Tris propane
Descriptor: Alanine racemase 2, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Bernardo-Garcia, N, Gago, F, Hermoso, J.A.
Deposit date:2018-12-12
Release date:2019-04-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Cold-induced aldimine bond cleavage by Tris in Bacillus subtilis alanine racemase.
Org.Biomol.Chem., 17, 2019
1RCQ
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BU of 1rcq by Molmil
The 1.45 A crystal structure of alanine racemase from a pathogenic bacterium, Pseudomonas aeruginosa, contains both internal and external aldimine forms
Descriptor: D-LYSINE, PYRIDOXAL-5'-PHOSPHATE, catabolic alanine racemase DadX
Authors:Le Magueres, P, Im, H, Dvorak, A, Strych, U, Benedik, M, Krause, K.L.
Deposit date:2003-11-04
Release date:2004-06-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure at 1.45 A resolution of alanine racemase from a pathogenic bacterium, Pseudomonas aeruginosa, contains both internal and external aldimine forms.
Biochemistry, 42, 2003
1SFT
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BU of 1sft by Molmil
ALANINE RACEMASE
Descriptor: ACETATE ION, ALANINE RACEMASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Shaw, J.P, Petsko, G.A, Ringe, D.
Deposit date:1996-09-20
Release date:1997-02-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Determination of the structure of alanine racemase from Bacillus stearothermophilus at 1.9-A resolution.
Biochemistry, 36, 1997
3B8V
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BU of 3b8v by Molmil
Crystal structure of Escherichia coli alaine racemase mutant E221K
Descriptor: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Wu, D, Hu, T, Zhang, L, Jiang, H, Shen, X.
Deposit date:2007-11-02
Release date:2008-07-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Residues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis
Protein Sci., 17, 2008
4A3Q
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BU of 4a3q by Molmil
The 2.15 Angstrom resolution crystal structure of Staphylococcus aureus alanine racemase
Descriptor: ACETATE ION, ALANINE RACEMASE 1, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Scaletti, E.R, Luckner, S.R, Krause, K.L.
Deposit date:2011-10-04
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Features and Kinetic Characterization of Alanine Racemase from Staphylococcus Aureus (Mu50)
Acta Crystallogr.,Sect.D, 68, 2012
3B8W
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BU of 3b8w by Molmil
Crystal structure of Escherichia coli alaine racemase mutant E221P
Descriptor: Alanine racemase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Wu, D, Hu, T, Zhang, L, Jiang, H, Shen, X.
Deposit date:2007-11-02
Release date:2008-07-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Residues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis
Protein Sci., 17, 2008

 

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