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5NCE
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Structure of PsDef1 defensin from Pinus sylvestris
Descriptor: Defensin-1
Authors:Khairutdinov, B.I, Ermakova, E.A, Bessolitsyna, E.K, Toporkova, Y.Y, Tarasova, N.B, Kovaleva, V, Zuev, Y.F, Nesmelova, I.V.
Deposit date:2017-03-03
Release date:2017-06-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure, conformational dynamics, and biological activity of PsDef1 defensin from Pinus sylvestris.
Biochim. Biophys. Acta, 1865, 2017
7LNS
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BU of 7lns by Molmil
NMR solution structure of PsDef2 defensin from P. sylvestris
Descriptor: Defensin-2
Authors:Nesmelova, I.V, Kovaleva, V, Hrunyk, N.I, Yusypovych, Y.M, Shalovylo, Y.I.
Deposit date:2021-02-08
Release date:2022-03-30
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure, dynamics, and function of PsDef2 defensin from Pinus sylvestris.
Structure, 30, 2022
6DMZ
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Solution structure of ZmD32
Descriptor: Flower-specific gamma-thionin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2018-06-05
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32.
Front Microbiol, 10, 2019
1TI5
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BU of 1ti5 by Molmil
Solution structure of plant defensin
Descriptor: plant defensin
Authors:Liu, Y.J, Cheng, C.S, Liu, Y.N, Hsu, M.P, Chen, C.S, Lyu, P.C.
Deposit date:2004-06-02
Release date:2005-07-26
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the plant defensin VrD1 from mung bean and its possible role in insecticidal activity against bruchids.
Proteins, 63, 2006
5KK4
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BU of 5kk4 by Molmil
Crystal Structure of the Plant Defensin NsD7 bound to Phosphatidic Acid
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Kvansakul, M, Hulett, M.D, Lay, F.T.
Deposit date:2016-06-21
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding of phosphatidic acid by NsD7 mediates the formation of helical defensin-lipid oligomeric assemblies and membrane permeabilization.
Proc.Natl.Acad.Sci.USA, 113, 2016
1BK8
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BU of 1bk8 by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF AESCULUS HIPPOCASTANUM ANTIMICROBIAL PROTEIN 1 (AH-AMP1) BY 1H NMR, 25 STRUCTURES
Descriptor: ANTIMICROBIAL PROTEIN 1
Authors:Fant, F, Borremans, F.A.M.
Deposit date:1998-07-15
Release date:2000-01-05
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:The three-dimensional solution structure of Aesculus hippocastanum antimicrobial protein 1 determined by 1H nuclear magnetic resonance.
Proteins, 37, 1999
6NOM
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BU of 6nom by Molmil
NMR solution structure of Pisum sativum defensin 2 (Psd2) provides evidence for the presence of hydrophobic surface clusters
Descriptor: Defensin-2
Authors:Pinheiro-Aguiar, R, Amaral, V.S.G, Bastos, I, Kurtenbach, E, Almeida, F.C.L.
Deposit date:2019-01-16
Release date:2019-08-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance solution structure of Pisum sativum defensin 2 provides evidence for the presence of hydrophobic surface-clusters.
Proteins, 88, 2020
1AYJ
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BU of 1ayj by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF RAPHANUS SATIVUS ANTIFUNGAL PROTEIN 1 (RS-AFP1) BY 1H NMR, 20 STRUCTURES
Descriptor: ANTIFUNGAL PROTEIN 1
Authors:Fant, F, Borremans, F.A.M.
Deposit date:1997-11-05
Release date:1998-01-28
Last modified:2019-12-25
Method:SOLUTION NMR
Cite:Determination of the three-dimensional solution structure of Raphanus sativus antifungal protein 1 by 1H NMR.
J.Mol.Biol., 279, 1998
7C31
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BU of 7c31 by Molmil
Crystal structure of the grapevine defensin VvK1
Descriptor: Knot1 domain-containing protein
Authors:Chen, M.W, Chang, S.C, Chandy, K.G, Luo, D.
Deposit date:2020-05-10
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Modulation of Lymphocyte Potassium Channel KV1.3 by Membrane-Penetrating, Joint-Targeting Immunomodulatory Plant Defensin.
Acs Pharmacol Transl Sci, 3, 2020
6VPN
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Solution structure of antifungal plant defensin PvD1
Descriptor: Knot1 domain-containing protein
Authors:Harvey, P.J.
Deposit date:2020-02-03
Release date:2020-08-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Synthesis, Structure, and Activity of the Antifungal Plant DefensinPvD1.
J.Med.Chem., 63, 2020
1JKZ
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BU of 1jkz by Molmil
NMR Solution Structure of Pisum sativum defensin 1 (Psd1)
Descriptor: DEFENSE-RELATED PEPTIDE 1
Authors:Almeida, M.S, Cabral, K.M.S, Kurtenbach, E, Almeida, F.C.L, Valente, A.P.
Deposit date:2001-07-13
Release date:2002-02-06
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of Pisum sativum defensin 1 by high resolution NMR: plant defensins, identical backbone with different mechanisms of action.
J.Mol.Biol., 315, 2002
8GXT
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BU of 8gxt by Molmil
Antibacterial peptide, mehamycin
Descriptor: Antibacterial peptide
Authors:Isozumi, N, Ohki, S.
Deposit date:2022-09-21
Release date:2023-09-27
Method:SOLUTION NMR
Cite:Antibacterial peptide, mehamycin
To Be Published
4UJ0
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BU of 4uj0 by Molmil
Crystal structure of the tomato defensin TPP3
Descriptor: ACETATE ION, FLOWER-SPECIFIC GAMMA-THIONIN-LIKE PROTEIN/ACIDIC PROTEIN
Authors:Richter, V, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2015-04-07
Release date:2015-04-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Tomato Defensin Tpp3 Binds Phosphatidylinositol (4,5)-Bisphosphate Via a Conserved Dimeric Cationic Grip Conformation to Mediate Cell Lysis.
Mol.Cell.Biol., 35, 2015
5VYP
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Crystal structure of the Plant Defensin NsD7 bound to PIP2
Descriptor: Defensin NsD7, GLYCEROL, SULFATE ION, ...
Authors:Jarva, M, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-05-25
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the defensin NsD7 in complex with PIP2 reveals that defensin : lipid oligomer topologies are dependent on lipid type.
FEBS Lett., 591, 2017
6B55
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BU of 6b55 by Molmil
Crystal structure of the Plant Defensin NaD1 complexed with phosphatidic acid
Descriptor: 1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Flower-specific defensin, ...
Authors:Jarva, M, Phan, K, Humble, C, Lay, F.T, Hulett, M, Kvansakul, M.
Deposit date:2017-09-28
Release date:2018-05-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of a carpet-like antimicrobial defensin-phospholipid membrane disruption complex.
Nat Commun, 9, 2018
3PSM
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BU of 3psm by Molmil
.98A crystal structure of a dimeric plant defensin SPE10
Descriptor: Defensin
Authors:Zhou, H, Song, X, Gong, W.
Deposit date:2010-12-01
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:0.98A crystal structure of a dimeric plant defensin SPE10
To be Published
6LCQ
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BU of 6lcq by Molmil
Crystal structure of rice defensin OsAFP1
Descriptor: Defensin-like protein CAL1, PHOSPHATE ION
Authors:Ochiai, A, Ogawa, K, Fukuda, M, Suzuki, M, Ito, K, Tanaka, T, Sagehashi, Y, Taniguchi, M.
Deposit date:2019-11-19
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of rice defensin OsAFP1 and molecular insight into lipid-binding.
J.Biosci.Bioeng., 130, 2020
1GPS
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BU of 1gps by Molmil
SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS
Descriptor: GAMMA-1-P THIONIN
Authors:Bruix, M, Jimenez, M.A, Santoro, J, Gonzalez, C, Colilla, F.J, Mendez, E, Rico, M.
Deposit date:1992-07-29
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of gamma 1-H and gamma 1-P thionins from barley and wheat endosperm determined by 1H-NMR: a structural motif common to toxic arthropod proteins.
Biochemistry, 32, 1993
1GPT
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BU of 1gpt by Molmil
SOLUTION STRUCTURE OF GAMMA 1-H AND GAMMA 1-P THIONINS FROM BARLEY AND WHEAT ENDOSPERM DETERMINED BY 1H-NMR: A STRUCTURAL MOTIF COMMON TO TOXIC ARTHROPOD PROTEINS
Descriptor: GAMMA-1-H THIONIN
Authors:Bruix, M, Jimenez, M.A, Santoro, J, Gonzalez, C, Colilla, F.J, Mendez, E, Rico, M.
Deposit date:1992-07-29
Release date:1993-10-31
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of gamma 1-H and gamma 1-P thionins from barley and wheat endosperm determined by 1H-NMR: a structural motif common to toxic arthropod proteins.
Biochemistry, 32, 1993
6MRY
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BU of 6mry by Molmil
NoD173 plant defensin
Descriptor: 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CHLORIDE ION, ...
Authors:Caria, S, Kvansakul, M.
Deposit date:2018-10-15
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional characterization of the membrane-permeabilizing activity ofNicotiana occidentalisdefensin NoD173 and protein engineering to enhance oncolysis.
Faseb J., 33, 2019
1N4N
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BU of 1n4n by Molmil
Structure of the Plant Defensin PhD1 from Petunia Hybrida
Descriptor: floral defensin-like protein 1
Authors:Janssen, B.J.C, Schirra, H.J, Lay, F.T, Anderson, M.A, Craik, D.J.
Deposit date:2002-11-01
Release date:2003-11-01
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Structure of Petunia hybrida defensin 1, a novel plant defensin with five disulfide bonds
Biochemistry, 42, 2003
1MR4
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BU of 1mr4 by Molmil
Solution Structure of NaD1 from Nicotiana alata
Descriptor: Nicotiana alata plant defensin 1 (NaD1)
Authors:Lay, F.T, Schirra, H.J, Scanlon, M.J, Anderson, M.A, Craik, D.J.
Deposit date:2002-09-18
Release date:2003-09-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The Three-dimensional Solution Structure of NaD1, a New Floral Defensin from Nicotiana alata and its Application to a Homology Model of the Crop Defense Protein alfAFP
J.MOL.BIOL., 325, 2003
4AB0
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X-ray crystal structure of Nicotiana alata defensin NaD1
Descriptor: FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Mills, G.D, Lay, F.T, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.636 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012
1MYN
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BU of 1myn by Molmil
SOLUTION STRUCTURE OF DROSOMYCIN, THE FIRST INDUCIBLE ANTIFUNGAL PROTEIN FROM INSECTS, NMR, 15 STRUCTURES
Descriptor: DROSOMYCIN
Authors:Landon, C, Sodano, P, Hetru, C, Hoffmann, J.A, Ptak, M.
Deposit date:1996-12-26
Release date:1997-12-31
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of drosomycin, the first inducible antifungal protein from insects.
Protein Sci., 6, 1997
4AAZ
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BU of 4aaz by Molmil
X-ray structure of Nicotiana alata Defensin 1 NaD1
Descriptor: 1,2-ETHANEDIOL, FLOWER-SPECIFIC DEFENSIN, PHOSPHATE ION
Authors:Lay, F.T, Mills, G.D, Hulett, M.D, Kvansakul, M.
Deposit date:2011-12-06
Release date:2012-04-25
Last modified:2012-08-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Dimerization of Plant Defensin Nad1 Enhances its Antifungal Activity.
J.Biol.Chem., 287, 2012

 

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