Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QK7

Elongator catalytic subcomplex Elp123 lobe

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0002098biological_processtRNA wobble uridine modification
A0002926biological_processtRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006357biological_processregulation of transcription by RNA polymerase II
A0006417biological_processregulation of translation
A0008033biological_processtRNA processing
A0015031biological_processprotein transport
A0033588cellular_componentelongator holoenzyme complex
A0042802molecular_functionidentical protein binding
A0043621molecular_functionobsolete protein self-association
B0002098biological_processtRNA wobble uridine modification
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0006357biological_processregulation of transcription by RNA polymerase II
B0006417biological_processregulation of translation
B0008017molecular_functionmicrotubule binding
B0008033biological_processtRNA processing
B0015031biological_processprotein transport
B0032447biological_processprotein urmylation
B0033588cellular_componentelongator holoenzyme complex
C0000049molecular_functiontRNA binding
C0002098biological_processtRNA wobble uridine modification
C0002926biological_processtRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
C0003723molecular_functionRNA binding
C0003824molecular_functioncatalytic activity
C0004402molecular_functionhistone acetyltransferase activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0006417biological_processregulation of translation
C0008033biological_processtRNA processing
C0016740molecular_functiontransferase activity
C0016746molecular_functionacyltransferase activity
C0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
C0033588cellular_componentelongator holoenzyme complex
C0046872molecular_functionmetal ion binding
C0051536molecular_functioniron-sulfur cluster binding
C0051539molecular_function4 iron, 4 sulfur cluster binding
C0106261molecular_functiontRNA uridine(34) acetyltransferase activity
D0000049molecular_functiontRNA binding
D0002098biological_processtRNA wobble uridine modification
D0002926biological_processtRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006357biological_processregulation of transcription by RNA polymerase II
D0006417biological_processregulation of translation
D0008033biological_processtRNA processing
D0015031biological_processprotein transport
D0033588cellular_componentelongator holoenzyme complex
D0042802molecular_functionidentical protein binding
D0043621molecular_functionobsolete protein self-association
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SF4 C 601
ChainResidue
CCYS108
CHIS110
CCYS118
CCYS121
CARG269

site_idAC2
Number of Residues8
Detailsbinding site for residue 5AD C 602
ChainResidue
CTYR327
CPRO328
CLEU330
CARG376
CTYR120
CGLN257
CHIS293
CMET295

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:16420352, ECO:0000269|PubMed:31309145, ECO:0007744|PDB:6QK7
ChainResidueDetails
CCYS108
DSER551
DSER636
DSER828
DSER1205
DSER1209
CCYS118
CCYS121
ASER636
ASER828
ASER1205
ASER1209
DSER529
DSER539

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:A0A1C7D1B7
ChainResidueDetails
CLYS173
CGLU485
CPHE508
CTYR541

site_idSWS_FT_FI3
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:12872131
ChainResidueDetails
CLYS453

218853

數據於2024-04-24公開中

PDB statisticsPDBj update infoContact PDBjnumon