6OM4
The structure of Microcin C7 biosynthetic enzyme MccB in complex with N-formylated MccA
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000166 | molecular_function | nucleotide binding |
A | 0002143 | biological_process | tRNA wobble position uridine thiolation |
A | 0004792 | molecular_function | thiosulfate sulfurtransferase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0008146 | molecular_function | sulfotransferase activity |
A | 0008641 | molecular_function | ubiquitin-like modifier activating enzyme activity |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0032447 | biological_process | protein urmylation |
A | 0042292 | molecular_function | URM1 activating enzyme activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0002143 | biological_process | tRNA wobble position uridine thiolation |
B | 0004792 | molecular_function | thiosulfate sulfurtransferase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0008146 | molecular_function | sulfotransferase activity |
B | 0008641 | molecular_function | ubiquitin-like modifier activating enzyme activity |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0032447 | biological_process | protein urmylation |
B | 0042292 | molecular_function | URM1 activating enzyme activity |
B | 0046872 | molecular_function | metal ion binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 4 |
詳細 | binding site for residue ZN A 401 |
鎖名 | 残基 |
A | CYS257 |
A | CYS260 |
A | CYS343 |
A | CYS346 |
site_id | AC2 |
残基数 | 5 |
詳細 | binding site for residue MG A 402 |
鎖名 | 残基 |
A | POP403 |
A | HOH516 |
A | HOH518 |
A | HOH585 |
A | HOH591 |
site_id | AC3 |
残基数 | 18 |
詳細 | binding site for residue POP A 403 |
鎖名 | 残基 |
A | ASN154 |
A | ARG157 |
A | GLN158 |
A | LYS170 |
A | MG402 |
A | MG404 |
A | HOH518 |
A | HOH521 |
A | HOH524 |
A | HOH532 |
A | HOH533 |
A | HOH568 |
A | HOH585 |
A | HOH591 |
A | HOH623 |
A | HOH627 |
B | ARG94 |
C | ND7101 |
site_id | AC4 |
残基数 | 5 |
詳細 | binding site for residue MG A 404 |
鎖名 | 残基 |
A | POP403 |
A | HOH532 |
A | HOH568 |
A | HOH623 |
C | ND7101 |
site_id | AC5 |
残基数 | 4 |
詳細 | binding site for residue ZN B 401 |
鎖名 | 残基 |
B | CYS257 |
B | CYS260 |
B | CYS343 |
B | CYS346 |
site_id | AC6 |
残基数 | 5 |
詳細 | binding site for residue MG B 402 |
鎖名 | 残基 |
B | GLU151 |
B | POP404 |
B | HOH504 |
B | HOH587 |
B | HOH589 |
site_id | AC7 |
残基数 | 5 |
詳細 | binding site for residue MG B 403 |
鎖名 | 残基 |
B | POP404 |
B | HOH526 |
B | HOH545 |
B | HOH576 |
D | ND7101 |
site_id | AC8 |
残基数 | 15 |
詳細 | binding site for residue POP B 404 |
鎖名 | 残基 |
A | ARG94 |
B | ASN154 |
B | ARG157 |
B | GLN158 |
B | LYS170 |
B | MG402 |
B | MG403 |
B | HOH526 |
B | HOH528 |
B | HOH545 |
B | HOH576 |
B | HOH584 |
B | HOH587 |
B | HOH589 |
D | ND7101 |
site_id | AC9 |
残基数 | 19 |
詳細 | binding site for residue ND7 C 101 |
鎖名 | 残基 |
A | GLY122 |
A | GLY124 |
A | GLY125 |
A | ARG157 |
A | GLN158 |
A | LYS170 |
A | LEU192 |
A | ASN193 |
A | ILE194 |
A | SER212 |
A | ALA213 |
A | HIS215 |
A | TYR239 |
A | POP403 |
A | MG404 |
A | HOH532 |
A | HOH568 |
B | GLU273 |
B | HOH571 |
site_id | AD1 |
残基数 | 17 |
詳細 | binding site for residue ND7 D 101 |
鎖名 | 残基 |
B | GLY122 |
B | GLY124 |
B | GLY125 |
B | ASN147 |
B | ARG157 |
B | GLN158 |
B | LYS170 |
B | LEU192 |
B | ILE194 |
B | SER212 |
B | ALA213 |
B | HIS215 |
B | TYR239 |
B | MG403 |
B | POP404 |
B | HOH526 |
B | HOH545 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 2 |
詳細 | MOD_RES: N-formylmethionine => ECO:0000269|PubMed:7559516, ECO:0000269|PubMed:7835418 |
鎖名 | 残基 | 詳細 |
C | FME1 | |
D | FME1 |
site_id | SWS_FT_FI2 |
残基数 | 2 |
詳細 | MOD_RES: Aspartic acid 1-[(3-aminopropyl)(5'-adenosyl)phosphono]amide => ECO:0000269|PubMed:7559516, ECO:0000269|PubMed:7835418 |
鎖名 | 残基 | 詳細 |
C | ASP7 | |
D | ASP7 |