6KBX
Crystal structure of yedK in complex with ssDNA containing abasic site
GO（遺伝子オントロジー）由来の情報
| 鎖名 | GO（遺伝子オントロジー）id | 名前空間 | 内容 |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003697 | molecular_function | single-stranded DNA binding |
| B | 0006508 | biological_process | proteolysis |
| B | 0006974 | biological_process | DNA damage response |
| B | 0008233 | molecular_function | peptidase activity |
| B | 0009432 | biological_process | SOS response |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016829 | molecular_function | lyase activity |
| B | 0106300 | biological_process | protein-DNA covalent cross-linking repair |
| B | 0160129 | molecular_function | protein-DNA covalent cross-linking activity |
SwissProt/UniProtに記載されている蛋白質分子機能情報
| site_id | SWS_FT_FI1 |
| 残基数 | 1 |
| 詳細 | ACT_SITE: Nucleophile => ECO:0000269|PubMed:31235915, ECO:0000269|PubMed:31504793 |
| 鎖名 | 残基 | 詳細 |
| B | CYS2 |
| site_id | SWS_FT_FI2 |
| 残基数 | 1 |
| 詳細 | ACT_SITE: ACT_SITE => ECO:0000305|PubMed:35934051, ECO:0000305|PubMed:37519246 |
| 鎖名 | 残基 | 詳細 |
| B | GLU105 |
| site_id | SWS_FT_FI3 |
| 残基数 | 1 |
| 詳細 | SITE: Required for sensing abasic sites => ECO:0000269|PubMed:31504793 |
| 鎖名 | 残基 | 詳細 |
| B | GLU105 |
| site_id | SWS_FT_FI4 |
| 残基数 | 1 |
| 詳細 | SITE: Required to stabilize abasic sites => ECO:0000269|PubMed:31235915 |
| 鎖名 | 残基 | 詳細 |
| B | HIS160 |
| site_id | SWS_FT_FI5 |
| 残基数 | 1 |
| 詳細 | MOD_RES: Thiazolidine linkage to a ring-opened DNA abasic site => ECO:0000269|PubMed:31235915, ECO:0000269|PubMed:31504793 |
| 鎖名 | 残基 | 詳細 |
| B | CYS2 |
