6K1E
Crystal structure of EXD2 exonuclease domain soaked in Mg and GMP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| A | 0008408 | molecular_function | 3'-5' exonuclease activity |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| B | 0008408 | molecular_function | 3'-5' exonuclease activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | binding site for residue MG A 301 |
| Chain | Residue |
| A | ASP108 |
| A | HOH401 |
| A | HOH402 |
| A | HOH403 |
| A | HOH405 |
| A | HOH406 |
| A | HOH409 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 302 |
| Chain | Residue |
| A | HOH403 |
| A | HOH405 |
| B | TYR242 |
| B | ASP246 |
| A | ASP108 |
| A | GLU110 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue MG B 301 |
| Chain | Residue |
| A | TYR242 |
| A | ASP246 |
| A | HOH404 |
| B | ASP108 |
| B | GLU110 |
| B | HOH407 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue MG B 302 |
| Chain | Residue |
| A | HOH404 |
| B | ASP108 |
| B | HOH401 |
| B | HOH405 |
| B | HOH407 |
| B | HOH413 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31127291, ECO:0007744|PDB:6K19, ECO:0007744|PDB:6K1A, ECO:0007744|PDB:6K1B, ECO:0007744|PDB:6K1C, ECO:0007744|PDB:6K1D, ECO:0007744|PDB:6K1E |
| Chain | Residue | Details |
| A | ASP108 | |
| B | ASP108 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31127291, ECO:0007744|PDB:6K18, ECO:0007744|PDB:6K1A, ECO:0007744|PDB:6K1B, ECO:0007744|PDB:6K1D, ECO:0007744|PDB:6K1E |
| Chain | Residue | Details |
| A | GLU110 | |
| A | ASP246 | |
| B | GLU110 | |
| B | ASP246 |
