6GFP
cyanobacterial GAPDH with NADP bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
A | 0005829 | cellular_component | cytosol |
A | 0006006 | biological_process | glucose metabolic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
A | 0046872 | molecular_function | metal ion binding |
A | 0050661 | molecular_function | NADP binding |
A | 0051287 | molecular_function | NAD binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
B | 0005829 | cellular_component | cytosol |
B | 0006006 | biological_process | glucose metabolic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
B | 0046872 | molecular_function | metal ion binding |
B | 0050661 | molecular_function | NADP binding |
B | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 40 |
Details | binding site for residue NAP A 1001 |
Chain | Residue |
A | GLY8 |
A | ALA99 |
A | THR100 |
A | GLY101 |
A | PHE103 |
A | THR123 |
A | ALA124 |
A | ASN317 |
A | TYR321 |
A | NAD1002 |
A | FMT1004 |
A | PHE9 |
A | HOH1101 |
A | HOH1105 |
A | HOH1110 |
A | HOH1113 |
A | HOH1115 |
A | HOH1123 |
A | HOH1136 |
A | HOH1137 |
A | HOH1138 |
A | HOH1153 |
A | GLY10 |
A | HOH1172 |
A | HOH1209 |
A | HOH1224 |
A | HOH1230 |
A | HOH1246 |
A | HOH1252 |
A | HOH1276 |
A | HOH1277 |
B | HOH1186 |
B | HOH1194 |
A | ARG11 |
B | HOH1201 |
A | ILE12 |
A | ASN35 |
A | ASP36 |
A | THR37 |
A | ARG81 |
site_id | AC2 |
Number of Residues | 34 |
Details | binding site for residue NAD A 1002 |
Chain | Residue |
A | GLY8 |
A | PHE9 |
A | GLY10 |
A | ARG11 |
A | ILE12 |
A | ASN35 |
A | ASP36 |
A | THR37 |
A | ARG81 |
A | ALA99 |
A | THR100 |
A | GLY101 |
A | THR123 |
A | ALA124 |
A | CYS154 |
A | ASN317 |
A | TYR321 |
A | NAP1001 |
A | FMT1004 |
A | HOH1101 |
A | HOH1110 |
A | HOH1113 |
A | HOH1115 |
A | HOH1123 |
A | HOH1137 |
A | HOH1138 |
A | HOH1142 |
A | HOH1153 |
A | HOH1172 |
A | HOH1224 |
A | HOH1230 |
A | HOH1246 |
A | HOH1277 |
B | HOH1194 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue MLI A 1003 |
Chain | Residue |
A | SER153 |
A | THR155 |
A | ARG199 |
A | THR212 |
A | GLY213 |
A | ARG235 |
A | FMT1004 |
A | HOH1109 |
A | HOH1214 |
A | HOH1223 |
A | HOH1229 |
A | HOH1358 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for residue FMT A 1004 |
Chain | Residue |
A | THR184 |
A | ARG199 |
A | ARG235 |
A | NAP1001 |
A | NAD1002 |
A | MLI1003 |
A | HOH1109 |
A | HOH1326 |
site_id | AC5 |
Number of Residues | 36 |
Details | binding site for residue NAP B 1001 |
Chain | Residue |
B | GLY10 |
B | ARG11 |
B | ILE12 |
B | ASN35 |
B | ASP36 |
B | THR37 |
B | ARG81 |
B | ALA99 |
B | THR100 |
B | GLY101 |
B | PHE103 |
B | THR123 |
B | ALA124 |
B | ASN317 |
B | TYR321 |
B | NAD1002 |
B | HOH1102 |
B | HOH1111 |
B | HOH1119 |
B | HOH1123 |
B | HOH1127 |
B | HOH1152 |
B | HOH1164 |
B | HOH1168 |
B | HOH1198 |
B | HOH1210 |
B | HOH1218 |
B | HOH1220 |
B | HOH1234 |
B | HOH1240 |
B | HOH1282 |
A | SER193 |
A | HOH1210 |
A | HOH1212 |
B | GLY8 |
B | PHE9 |
site_id | AC6 |
Number of Residues | 33 |
Details | binding site for residue NAD B 1002 |
Chain | Residue |
B | GLY8 |
B | PHE9 |
B | GLY10 |
B | ARG11 |
B | ILE12 |
B | ASN35 |
B | ASP36 |
B | THR37 |
B | ARG81 |
B | ALA99 |
B | THR100 |
B | GLY101 |
B | THR123 |
B | ALA124 |
B | CYS154 |
B | THR184 |
B | ASN317 |
B | TYR321 |
B | NAP1001 |
B | HOH1102 |
B | HOH1113 |
B | HOH1119 |
B | HOH1123 |
B | HOH1127 |
B | HOH1152 |
B | HOH1164 |
B | HOH1168 |
B | HOH1198 |
B | HOH1213 |
B | HOH1218 |
B | HOH1220 |
B | HOH1234 |
B | HOH1282 |
site_id | AC7 |
Number of Residues | 10 |
Details | binding site for residue MLI B 1003 |
Chain | Residue |
B | SER153 |
B | THR155 |
B | ARG199 |
B | THR212 |
B | GLY213 |
B | ARG235 |
B | HOH1109 |
B | HOH1200 |
B | HOH1209 |
B | HOH1222 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue MG B 1004 |
Chain | Residue |
A | ALA334 |
A | HOH1198 |
B | SER114 |
B | HOH1219 |
B | HOH1326 |
B | HOH1327 |
Functional Information from PROSITE/UniProt
site_id | PS00071 |
Number of Residues | 8 |
Details | GAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL |
Chain | Residue | Details |
A | ALA152-LEU159 |