6AAP
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with ZaeSeCys
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000049 | molecular_function | tRNA binding |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0043039 | biological_process | tRNA aminoacylation |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 5 |
詳細 | binding site for residue MG A 501 |
鎖名 | 残基 |
A | ATP504 |
A | HOH640 |
A | HOH682 |
A | HOH691 |
A | HOH750 |
site_id | AC2 |
残基数 | 6 |
詳細 | binding site for residue MG A 502 |
鎖名 | 残基 |
A | HOH637 |
A | HOH732 |
A | GLU396 |
A | SER399 |
A | MG503 |
A | ATP504 |
site_id | AC3 |
残基数 | 6 |
詳細 | binding site for residue MG A 503 |
鎖名 | 残基 |
A | GLU207 |
A | GLU396 |
A | MG502 |
A | ATP504 |
A | HOH637 |
A | HOH716 |
site_id | AC4 |
残基数 | 31 |
詳細 | binding site for residue ATP A 504 |
鎖名 | 残基 |
A | GLU207 |
A | ARG330 |
A | GLU332 |
A | HIS338 |
A | LEU339 |
A | PHE342 |
A | MET344 |
A | GLU396 |
A | LEU397 |
A | SER398 |
A | SER399 |
A | GLY421 |
A | GLY423 |
A | ARG426 |
A | MG501 |
A | MG502 |
A | MG503 |
A | 9U6505 |
A | HOH611 |
A | HOH637 |
A | HOH640 |
A | HOH682 |
A | HOH691 |
A | HOH716 |
A | HOH731 |
A | HOH732 |
A | HOH745 |
A | HOH748 |
A | HOH750 |
A | HOH764 |
A | HOH768 |
site_id | AC5 |
残基数 | 17 |
詳細 | binding site for residue 9U6 A 505 |
鎖名 | 残基 |
A | MET276 |
A | MET300 |
A | ALA302 |
A | ALA306 |
A | LEU309 |
A | ARG330 |
A | ASN346 |
A | CYS348 |
A | PHE384 |
A | SER399 |
A | ASP408 |
A | ILE413 |
A | TRP417 |
A | GLY421 |
A | ATP504 |
A | HOH603 |
A | HOH787 |