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5ZGE

Crystal structure of NDM-1 at pH5.5 (Bis-Tris) in complex with hydrolyzed ampicillin

Replaces:  3Q6X
Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
B0008270molecular_functionzinc ion binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue ZZ7 A 301
ChainResidue
ALEU65
AGLY219
AASN220
AHIS250
AZN302
AZN303
AOH304
AHOH549
AHOH563
AHOH577
BTHR34
AMET67
BPRO68
BGLY69
BHOH659
ATRP93
AHIS122
AGLN123
AASP124
AHIS189
ACYS208
ALYS211

site_idAC2
Number of Residues5
Detailsbinding site for residue ZN A 302
ChainResidue
AHIS120
AHIS122
AHIS189
AZZ7301
AOH304

site_idAC3
Number of Residues5
Detailsbinding site for residue ZN A 303
ChainResidue
AASP124
ACYS208
AHIS250
AZZ7301
AOH304

site_idAC4
Number of Residues8
Detailsbinding site for residue OH A 304
ChainResidue
AHIS120
AHIS122
AASP124
AHIS189
ACYS208
AZZ7301
AZN302
AZN303

site_idAC5
Number of Residues5
Detailsbinding site for residue ZN B 301
ChainResidue
BHIS120
BHIS122
BHIS189
BZZ7302
BOH304

site_idAC6
Number of Residues21
Detailsbinding site for residue ZZ7 B 302
ChainResidue
ATHR34
APRO68
AGLY69
AHOH631
AHOH674
BLEU65
BMET67
BTRP93
BHIS122
BGLN123
BASP124
BHIS189
BCYS208
BLYS211
BGLY219
BASN220
BHIS250
BZN301
BZN303
BOH304
BHOH511

site_idAC7
Number of Residues5
Detailsbinding site for residue ZN B 303
ChainResidue
BASP124
BCYS208
BHIS250
BZZ7302
BOH304

site_idAC8
Number of Residues8
Detailsbinding site for residue OH B 304
ChainResidue
BHIS120
BHIS122
BASP124
BHIS189
BCYS208
BZN301
BZZ7302
BZN303

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:22713171, ECO:0000269|PubMed:25815530
ChainResidueDetails
AHIS120
BHIS189
BCYS208
BHIS250
AHIS122
AASP124
AHIS189
ACYS208
AHIS250
BHIS120
BHIS122
BASP124

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:22713171
ChainResidueDetails
ALYS211
AASN220
BLYS211
BASN220

218853

数据于2024-04-24公开中

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