Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5W66

RNA polymerase I Initial Transcribing Complex State 3

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0000428cellular_componentDNA-directed RNA polymerase complex
A0001054molecular_functionRNA polymerase I activity
A0003677molecular_functionDNA binding
A0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005730cellular_componentnucleolus
A0005736cellular_componentRNA polymerase I complex
A0006351biological_processDNA-templated transcription
A0006360biological_processtranscription by RNA polymerase I
A0006361biological_processtranscription initiation at RNA polymerase I promoter
A0006362biological_processtranscription elongation by RNA polymerase I
A0006363biological_processtermination of RNA polymerase I transcription
A0008270molecular_functionzinc ion binding
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034062molecular_function5'-3' RNA polymerase activity
A0042254biological_processribosome biogenesis
A0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
A0046872molecular_functionmetal ion binding
A1990841molecular_functionpromoter-specific chromatin binding
B0000428cellular_componentDNA-directed RNA polymerase complex
B0001054molecular_functionRNA polymerase I activity
B0003677molecular_functionDNA binding
B0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005730cellular_componentnucleolus
B0005736cellular_componentRNA polymerase I complex
B0006351biological_processDNA-templated transcription
B0006360biological_processtranscription by RNA polymerase I
B0006361biological_processtranscription initiation at RNA polymerase I promoter
B0006362biological_processtranscription elongation by RNA polymerase I
B0006363biological_processtermination of RNA polymerase I transcription
B0008270molecular_functionzinc ion binding
B0016740molecular_functiontransferase activity
B0016779molecular_functionnucleotidyltransferase activity
B0032549molecular_functionribonucleoside binding
B0034062molecular_function5'-3' RNA polymerase activity
B0042254biological_processribosome biogenesis
B0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
B0046872molecular_functionmetal ion binding
C0000428cellular_componentDNA-directed RNA polymerase complex
C0001054molecular_functionRNA polymerase I activity
C0001056molecular_functionRNA polymerase III activity
C0003677molecular_functionDNA binding
C0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005666cellular_componentRNA polymerase III complex
C0005730cellular_componentnucleolus
C0005736cellular_componentRNA polymerase I complex
C0006351biological_processDNA-templated transcription
C0006360biological_processtranscription by RNA polymerase I
C0006361biological_processtranscription initiation at RNA polymerase I promoter
C0006362biological_processtranscription elongation by RNA polymerase I
C0006363biological_processtermination of RNA polymerase I transcription
C0006383biological_processtranscription by RNA polymerase III
C0006384biological_processtranscription initiation at RNA polymerase III promoter
C0006386biological_processtermination of RNA polymerase III transcription
C0042254biological_processribosome biogenesis
C0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
C0042797biological_processtRNA transcription by RNA polymerase III
C0046983molecular_functionprotein dimerization activity
C0055029cellular_componentnuclear DNA-directed RNA polymerase complex
D0000428cellular_componentDNA-directed RNA polymerase complex
D0001054molecular_functionRNA polymerase I activity
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005730cellular_componentnucleolus
D0005736cellular_componentRNA polymerase I complex
D0006360biological_processtranscription by RNA polymerase I
D0006361biological_processtranscription initiation at RNA polymerase I promoter
D0006362biological_processtranscription elongation by RNA polymerase I
D0006363biological_processtermination of RNA polymerase I transcription
D0008361biological_processregulation of cell size
D0042254biological_processribosome biogenesis
D0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
E0000428cellular_componentDNA-directed RNA polymerase complex
E0001054molecular_functionRNA polymerase I activity
E0001055molecular_functionRNA polymerase II activity
E0001056molecular_functionRNA polymerase III activity
E0001172biological_processRNA-templated transcription
E0003677molecular_functionDNA binding
E0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
E0003968molecular_functionRNA-dependent RNA polymerase activity
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005665cellular_componentRNA polymerase II, core complex
E0005666cellular_componentRNA polymerase III complex
E0005736cellular_componentRNA polymerase I complex
E0006351biological_processDNA-templated transcription
E0006360biological_processtranscription by RNA polymerase I
E0006361biological_processtranscription initiation at RNA polymerase I promoter
E0006362biological_processtranscription elongation by RNA polymerase I
E0006363biological_processtermination of RNA polymerase I transcription
E0006366biological_processtranscription by RNA polymerase II
E0006367biological_processtranscription initiation at RNA polymerase II promoter
E0006368biological_processtranscription elongation by RNA polymerase II
E0006383biological_processtranscription by RNA polymerase III
E0006384biological_processtranscription initiation at RNA polymerase III promoter
E0006386biological_processtermination of RNA polymerase III transcription
E0042254biological_processribosome biogenesis
E0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
E0042797biological_processtRNA transcription by RNA polymerase III
E0055029cellular_componentnuclear DNA-directed RNA polymerase complex
F0000428cellular_componentDNA-directed RNA polymerase complex
F0001054molecular_functionRNA polymerase I activity
F0001055molecular_functionRNA polymerase II activity
F0001056molecular_functionRNA polymerase III activity
F0001172biological_processRNA-templated transcription
F0003677molecular_functionDNA binding
F0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
F0003968molecular_functionRNA-dependent RNA polymerase activity
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005665cellular_componentRNA polymerase II, core complex
F0005666cellular_componentRNA polymerase III complex
F0005736cellular_componentRNA polymerase I complex
F0005737cellular_componentcytoplasm
F0006351biological_processDNA-templated transcription
F0006360biological_processtranscription by RNA polymerase I
F0006361biological_processtranscription initiation at RNA polymerase I promoter
F0006362biological_processtranscription elongation by RNA polymerase I
F0006363biological_processtermination of RNA polymerase I transcription
F0006366biological_processtranscription by RNA polymerase II
F0006367biological_processtranscription initiation at RNA polymerase II promoter
F0006368biological_processtranscription elongation by RNA polymerase II
F0006383biological_processtranscription by RNA polymerase III
F0006384biological_processtranscription initiation at RNA polymerase III promoter
F0006386biological_processtermination of RNA polymerase III transcription
F0042254biological_processribosome biogenesis
F0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
F0042797biological_processtRNA transcription by RNA polymerase III
G0000428cellular_componentDNA-directed RNA polymerase complex
G0001054molecular_functionRNA polymerase I activity
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005730cellular_componentnucleolus
G0005736cellular_componentRNA polymerase I complex
G0006351biological_processDNA-templated transcription
G0006352biological_processDNA-templated transcription initiation
G0006360biological_processtranscription by RNA polymerase I
G0006361biological_processtranscription initiation at RNA polymerase I promoter
G0006362biological_processtranscription elongation by RNA polymerase I
G0006363biological_processtermination of RNA polymerase I transcription
G0042254biological_processribosome biogenesis
G0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
G0055029cellular_componentnuclear DNA-directed RNA polymerase complex
H0000428cellular_componentDNA-directed RNA polymerase complex
H0001054molecular_functionRNA polymerase I activity
H0001055molecular_functionRNA polymerase II activity
H0001056molecular_functionRNA polymerase III activity
H0001172biological_processRNA-templated transcription
H0003677molecular_functionDNA binding
H0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
H0003968molecular_functionRNA-dependent RNA polymerase activity
H0005515molecular_functionprotein binding
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005665cellular_componentRNA polymerase II, core complex
H0005666cellular_componentRNA polymerase III complex
H0005736cellular_componentRNA polymerase I complex
H0006351biological_processDNA-templated transcription
H0006360biological_processtranscription by RNA polymerase I
H0006361biological_processtranscription initiation at RNA polymerase I promoter
H0006362biological_processtranscription elongation by RNA polymerase I
H0006363biological_processtermination of RNA polymerase I transcription
H0006366biological_processtranscription by RNA polymerase II
H0006367biological_processtranscription initiation at RNA polymerase II promoter
H0006368biological_processtranscription elongation by RNA polymerase II
H0006383biological_processtranscription by RNA polymerase III
H0006384biological_processtranscription initiation at RNA polymerase III promoter
H0006386biological_processtermination of RNA polymerase III transcription
H0042254biological_processribosome biogenesis
H0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
H0042797biological_processtRNA transcription by RNA polymerase III
I0000122biological_processnegative regulation of transcription by RNA polymerase II
I0000428cellular_componentDNA-directed RNA polymerase complex
I0001054molecular_functionRNA polymerase I activity
I0003676molecular_functionnucleic acid binding
I0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
I0005634cellular_componentnucleus
I0005730cellular_componentnucleolus
I0005736cellular_componentRNA polymerase I complex
I0006351biological_processDNA-templated transcription
I0006360biological_processtranscription by RNA polymerase I
I0006361biological_processtranscription initiation at RNA polymerase I promoter
I0006362biological_processtranscription elongation by RNA polymerase I
I0006363biological_processtermination of RNA polymerase I transcription
I0008270molecular_functionzinc ion binding
I0042254biological_processribosome biogenesis
I0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
I0046872molecular_functionmetal ion binding
I0055029cellular_componentnuclear DNA-directed RNA polymerase complex
I0061629molecular_functionRNA polymerase II-specific DNA-binding transcription factor binding
J0000428cellular_componentDNA-directed RNA polymerase complex
J0001054molecular_functionRNA polymerase I activity
J0001055molecular_functionRNA polymerase II activity
J0001056molecular_functionRNA polymerase III activity
J0001172biological_processRNA-templated transcription
J0003677molecular_functionDNA binding
J0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
J0003968molecular_functionRNA-dependent RNA polymerase activity
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005654cellular_componentnucleoplasm
J0005665cellular_componentRNA polymerase II, core complex
J0005666cellular_componentRNA polymerase III complex
J0005730cellular_componentnucleolus
J0005736cellular_componentRNA polymerase I complex
J0006351biological_processDNA-templated transcription
J0006360biological_processtranscription by RNA polymerase I
J0006361biological_processtranscription initiation at RNA polymerase I promoter
J0006362biological_processtranscription elongation by RNA polymerase I
J0006363biological_processtermination of RNA polymerase I transcription
J0006366biological_processtranscription by RNA polymerase II
J0006367biological_processtranscription initiation at RNA polymerase II promoter
J0006368biological_processtranscription elongation by RNA polymerase II
J0006383biological_processtranscription by RNA polymerase III
J0006384biological_processtranscription initiation at RNA polymerase III promoter
J0006386biological_processtermination of RNA polymerase III transcription
J0008270molecular_functionzinc ion binding
J0042254biological_processribosome biogenesis
J0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
J0042797biological_processtRNA transcription by RNA polymerase III
J0046872molecular_functionmetal ion binding
K0000428cellular_componentDNA-directed RNA polymerase complex
K0001054molecular_functionRNA polymerase I activity
K0001056molecular_functionRNA polymerase III activity
K0003677molecular_functionDNA binding
K0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
K0005515molecular_functionprotein binding
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005666cellular_componentRNA polymerase III complex
K0005730cellular_componentnucleolus
K0005736cellular_componentRNA polymerase I complex
K0006351biological_processDNA-templated transcription
K0006360biological_processtranscription by RNA polymerase I
K0006361biological_processtranscription initiation at RNA polymerase I promoter
K0006362biological_processtranscription elongation by RNA polymerase I
K0006363biological_processtermination of RNA polymerase I transcription
K0006383biological_processtranscription by RNA polymerase III
K0006384biological_processtranscription initiation at RNA polymerase III promoter
K0006386biological_processtermination of RNA polymerase III transcription
K0042254biological_processribosome biogenesis
K0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
K0042797biological_processtRNA transcription by RNA polymerase III
K0046983molecular_functionprotein dimerization activity
K0055029cellular_componentnuclear DNA-directed RNA polymerase complex
L0000428cellular_componentDNA-directed RNA polymerase complex
L0001054molecular_functionRNA polymerase I activity
L0001055molecular_functionRNA polymerase II activity
L0001056molecular_functionRNA polymerase III activity
L0001172biological_processRNA-templated transcription
L0003677molecular_functionDNA binding
L0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
L0003968molecular_functionRNA-dependent RNA polymerase activity
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005665cellular_componentRNA polymerase II, core complex
L0005666cellular_componentRNA polymerase III complex
L0005730cellular_componentnucleolus
L0005736cellular_componentRNA polymerase I complex
L0005737cellular_componentcytoplasm
L0005777cellular_componentperoxisome
L0006351biological_processDNA-templated transcription
L0006360biological_processtranscription by RNA polymerase I
L0006361biological_processtranscription initiation at RNA polymerase I promoter
L0006362biological_processtranscription elongation by RNA polymerase I
L0006363biological_processtermination of RNA polymerase I transcription
L0006366biological_processtranscription by RNA polymerase II
L0006367biological_processtranscription initiation at RNA polymerase II promoter
L0006368biological_processtranscription elongation by RNA polymerase II
L0006383biological_processtranscription by RNA polymerase III
L0006384biological_processtranscription initiation at RNA polymerase III promoter
L0006386biological_processtermination of RNA polymerase III transcription
L0008270molecular_functionzinc ion binding
L0042254biological_processribosome biogenesis
L0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
L0042797biological_processtRNA transcription by RNA polymerase III
L0046872molecular_functionmetal ion binding
M0000428cellular_componentDNA-directed RNA polymerase complex
M0001054molecular_functionRNA polymerase I activity
M0001188biological_processRNA polymerase I preinitiation complex assembly
M0003677molecular_functionDNA binding
M0005634cellular_componentnucleus
M0005730cellular_componentnucleolus
M0005736cellular_componentRNA polymerase I complex
M0006351biological_processDNA-templated transcription
M0006360biological_processtranscription by RNA polymerase I
M0006361biological_processtranscription initiation at RNA polymerase I promoter
M0006362biological_processtranscription elongation by RNA polymerase I
M0006363biological_processtermination of RNA polymerase I transcription
M0008361biological_processregulation of cell size
M0016740molecular_functiontransferase activity
M0016779molecular_functionnucleotidyltransferase activity
M0042254biological_processribosome biogenesis
M0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
N0000428cellular_componentDNA-directed RNA polymerase complex
N0001054molecular_functionRNA polymerase I activity
N0005634cellular_componentnucleus
N0005730cellular_componentnucleolus
N0005736cellular_componentRNA polymerase I complex
N0006360biological_processtranscription by RNA polymerase I
N0006361biological_processtranscription initiation at RNA polymerase I promoter
N0006362biological_processtranscription elongation by RNA polymerase I
N0006363biological_processtermination of RNA polymerase I transcription
N0042254biological_processribosome biogenesis
N0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
O0001163molecular_functionRNA polymerase I transcription regulatory region sequence-specific DNA binding
O0001179molecular_functionRNA polymerase I general transcription initiation factor binding
O0005515molecular_functionprotein binding
O0005634cellular_componentnucleus
O0005730cellular_componentnucleolus
O0005737cellular_componentcytoplasm
O0006361biological_processtranscription initiation at RNA polymerase I promoter
O0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
O0070860cellular_componentRNA polymerase I core factor complex
P0000120cellular_componentRNA polymerase I transcription regulator complex
P0001164molecular_functionRNA polymerase I core promoter sequence-specific DNA binding
P0001188biological_processRNA polymerase I preinitiation complex assembly
P0003677molecular_functionDNA binding
P0005515molecular_functionprotein binding
P0005634cellular_componentnucleus
P0005668cellular_componentRNA polymerase transcription factor SL1 complex
P0005730cellular_componentnucleolus
P0006360biological_processtranscription by RNA polymerase I
P0008270molecular_functionzinc ion binding
P0017025molecular_functionTBP-class protein binding
P0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
P0046872molecular_functionmetal ion binding
P0070860cellular_componentRNA polymerase I core factor complex
Q0001164molecular_functionRNA polymerase I core promoter sequence-specific DNA binding
Q0001181molecular_functionRNA polymerase I general transcription initiation factor activity
Q0001188biological_processRNA polymerase I preinitiation complex assembly
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005730cellular_componentnucleolus
Q0006361biological_processtranscription initiation at RNA polymerase I promoter
Q0017025molecular_functionTBP-class protein binding
Q0042790biological_processnucleolar large rRNA transcription by RNA polymerase I
Q0070860cellular_componentRNA polymerase I core factor complex
PDBデータベースに由来する情報
site_idAC1
残基数5
詳細binding site for residue ZN A 1701
鎖名残基
ACYS102
ACYS105
AHIS107
ACYS233
ACYS236

site_idAC2
残基数5
詳細binding site for residue ZN A 1702
鎖名残基
AHIS75
ACYS62
ACYS65
ACYS72
AGLY74

site_idAC3
残基数5
詳細binding site for residue ZN B 1301
鎖名残基
BCYS1104
BGLU1106
BCYS1107
BCYS1128
BCYS1131

site_idAC4
残基数5
詳細binding site for residue ZN I 201
鎖名残基
ICYS10
ICYS13
ICYS30
IGLN32
ICYS33

site_idAC5
残基数4
詳細binding site for residue ZN J 101
鎖名残基
JCYS7
JCYS10
JCYS45
JCYS46

site_idAC6
残基数4
詳細binding site for residue ZN L 101
鎖名残基
LCYS31
LCYS34
LCYS48
LCYS51

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS01112
残基数10
詳細RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
鎖名残基詳細
JILE2-GLY11

site_idPS01111
残基数15
詳細RNA_POL_K_14KD RNA polymerases K / 14 to 18 Kd subunits signature. TkYErARiLGtRAlQ
鎖名残基詳細
FTHR86-GLN100

site_idPS01166
残基数13
詳細RNA_POL_BETA RNA polymerases beta chain signature. GdKFSSrHGQKGV
鎖名残基詳細
BGLY914-VAL926

site_idPS01154
残基数32
詳細RNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. IveEdHTLgNaLryvImknpdVefcgYsipHP
鎖名残基詳細
KILE65-PRO96

site_idPS01110
残基数14
詳細RNA_POL_H_23KD RNA polymerases H / 23 Kd subunits signature. HELVPKHirLssDE
鎖名残基詳細
EHIS147-GLU160

site_idPS00446
残基数41
詳細RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NAFRRimisevpsvAaeyVyffnNtSviqDEvLAhRIGLVP
鎖名残基詳細
CASN65-PRO105

site_idPS00466
残基数36
詳細ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpqCgneemnyhtLQLRSaDEGatvfytCts...CgykF
鎖名残基詳細
ICYS86-PHE121

site_idPS01030
残基数25
詳細RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FClDCGDLLenpnavlgsnve..CsqC
鎖名残基詳細
IPHE9-CYS33

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数33
詳細ZN_FING: RRN7-type
鎖名残基詳細
PTHR3-GLU36
NSER12
JCYS45
JCYS46
ACYS102
ACYS105
ACYS233
ACYS236

site_idSWS_FT_FI2
残基数4
詳細BINDING: BINDING => ECO:0000305
鎖名残基詳細
PCYS10
PCYS15
PCYS29
PHIS33

site_idSWS_FT_FI3
残基数1
詳細MOD_RES: Phosphoserine => ECO:0007744|PubMed:18407956
鎖名残基詳細
NSER60
ICYS89
ICYS114
ICYS117

site_idSWS_FT_FI4
残基数1
詳細MOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
鎖名残基詳細
BSER1156

218853

件を2024-04-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon