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5GTD

o-Succinylbenzoate CoA Synthetase (MenE) from Bacillus Subtilis in Complex with the Acyl-adenylate Intermediate OSB-AMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0008756molecular_functiono-succinylbenzoate-CoA ligase activity
A0009234biological_processmenaquinone biosynthetic process
A0016405molecular_functionCoA-ligase activity
A0016874molecular_functionligase activity
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0008756molecular_functiono-succinylbenzoate-CoA ligase activity
B0009234biological_processmenaquinone biosynthetic process
B0016405molecular_functionCoA-ligase activity
B0016874molecular_functionligase activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue CL A 501
ChainResidue
AARG19
BLEU178

site_idAC2
Number of Residues3
Detailsbinding site for residue PEG A 504
ChainResidue
ATHR297
ASER299
AGLU301

site_idAC3
Number of Residues6
Detailsbinding site for residue CL B 501
ChainResidue
BGLN294
BASN342
BSER172
BTHR291
BCYS292
BSER293

site_idAC4
Number of Residues5
Detailsbinding site for residue MG B 502
ChainResidue
APHE315
ASER316
BPRO6
BTRP8
BGLN11

site_idAC5
Number of Residues5
Detailsbinding site for residue IMD B 503
ChainResidue
ALEU178
AASN179
BARG19
BGLU184
BTYR209

site_idAC6
Number of Residues22
Detailsbinding site for Di-nucleotide A A 505 and OSB A 506
ChainResidue
ASER153
AHIS196
AILE197
ASER198
AALA238
ALEU261
AGLY263
AGLY264
AGLY265
APRO266
ASER285
AGLY287
AMET288
ATHR289
ASER293
AGLN294
AASP367
AVAL379
AARG382
ALYS471
AHOH602
AHOH614

site_idAC7
Number of Residues16
Detailsbinding site for Di-nucleotide A B 504 and OSB B 505
ChainResidue
BILE197
BSER198
BALA238
BLEU261
BGLY263
BGLY264
BPRO266
BSER285
BGLY287
BMET288
BTHR289
BSER293
BGLN294
BASP367
BVAL379
BHOH604

Functional Information from PROSITE/UniProt
site_idPS00455
Number of Residues12
DetailsAMP_BINDING Putative AMP-binding domain signature. LMYTSGTTGkPK
ChainResidueDetails
ALEU149-LYS160

218500

数据于2024-04-17公开中

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