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4YTZ

Rat xanthine oxidoreductase, C-terminal deletion protein variant, crystal grown without dithiothreitol

Functional Information from GO Data
ChainGOidnamespacecontents
A0000255biological_processallantoin metabolic process
A0001933biological_processnegative regulation of protein phosphorylation
A0001937biological_processnegative regulation of endothelial cell proliferation
A0004854molecular_functionxanthine dehydrogenase activity
A0004855molecular_functionxanthine oxidase activity
A0005506molecular_functioniron ion binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005777cellular_componentperoxisome
A0005829cellular_componentcytosol
A0006147biological_processguanine catabolic process
A0006148biological_processinosine catabolic process
A0006149biological_processdeoxyinosine catabolic process
A0006154biological_processadenosine catabolic process
A0006157biological_processdeoxyadenosine catabolic process
A0006161biological_processdeoxyguanosine catabolic process
A0006196biological_processAMP catabolic process
A0006204biological_processIMP catabolic process
A0007595biological_processlactation
A0009114biological_processhypoxanthine catabolic process
A0009115biological_processxanthine catabolic process
A0010044biological_processresponse to aluminum ion
A0010629biological_processnegative regulation of gene expression
A0016226biological_processiron-sulfur cluster assembly
A0016491molecular_functionoxidoreductase activity
A0016529cellular_componentsarcoplasmic reticulum
A0030856biological_processregulation of epithelial cell differentiation
A0032496biological_processresponse to lipopolysaccharide
A0034465biological_processresponse to carbon monoxide
A0042542biological_processresponse to hydrogen peroxide
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0043546molecular_functionmolybdopterin cofactor binding
A0043605biological_processamide catabolic process
A0045602biological_processnegative regulation of endothelial cell differentiation
A0046038biological_processGMP catabolic process
A0046055biological_processdGMP catabolic process
A0046059biological_processdAMP catabolic process
A0046872molecular_functionmetal ion binding
A0050421molecular_functionnitrite reductase (NO-forming) activity
A0050660molecular_functionflavin adenine dinucleotide binding
A0051536molecular_functioniron-sulfur cluster binding
A0051537molecular_function2 iron, 2 sulfur cluster binding
A0051898biological_processnegative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
A0070674molecular_functionhypoxanthine dehydrogenase activity
A0070675molecular_functionhypoxanthine oxidase activity
A0071347biological_processcellular response to interleukin-1
A0071356biological_processcellular response to tumor necrosis factor
A0071949molecular_functionFAD binding
A0097184biological_processresponse to azide
A1900745biological_processpositive regulation of p38MAPK cascade
A1900747biological_processnegative regulation of vascular endothelial growth factor signaling pathway
A2000379biological_processpositive regulation of reactive oxygen species metabolic process
A2001213biological_processnegative regulation of vasculogenesis
B0000255biological_processallantoin metabolic process
B0001933biological_processnegative regulation of protein phosphorylation
B0001937biological_processnegative regulation of endothelial cell proliferation
B0004854molecular_functionxanthine dehydrogenase activity
B0004855molecular_functionxanthine oxidase activity
B0005506molecular_functioniron ion binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005737cellular_componentcytoplasm
B0005777cellular_componentperoxisome
B0005829cellular_componentcytosol
B0006147biological_processguanine catabolic process
B0006148biological_processinosine catabolic process
B0006149biological_processdeoxyinosine catabolic process
B0006154biological_processadenosine catabolic process
B0006157biological_processdeoxyadenosine catabolic process
B0006161biological_processdeoxyguanosine catabolic process
B0006196biological_processAMP catabolic process
B0006204biological_processIMP catabolic process
B0007595biological_processlactation
B0009114biological_processhypoxanthine catabolic process
B0009115biological_processxanthine catabolic process
B0010044biological_processresponse to aluminum ion
B0010629biological_processnegative regulation of gene expression
B0016226biological_processiron-sulfur cluster assembly
B0016491molecular_functionoxidoreductase activity
B0016529cellular_componentsarcoplasmic reticulum
B0030856biological_processregulation of epithelial cell differentiation
B0032496biological_processresponse to lipopolysaccharide
B0034465biological_processresponse to carbon monoxide
B0042542biological_processresponse to hydrogen peroxide
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0043546molecular_functionmolybdopterin cofactor binding
B0043605biological_processamide catabolic process
B0045602biological_processnegative regulation of endothelial cell differentiation
B0046038biological_processGMP catabolic process
B0046055biological_processdGMP catabolic process
B0046059biological_processdAMP catabolic process
B0046872molecular_functionmetal ion binding
B0050421molecular_functionnitrite reductase (NO-forming) activity
B0050660molecular_functionflavin adenine dinucleotide binding
B0051536molecular_functioniron-sulfur cluster binding
B0051537molecular_function2 iron, 2 sulfur cluster binding
B0051898biological_processnegative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction
B0070674molecular_functionhypoxanthine dehydrogenase activity
B0070675molecular_functionhypoxanthine oxidase activity
B0071347biological_processcellular response to interleukin-1
B0071356biological_processcellular response to tumor necrosis factor
B0071949molecular_functionFAD binding
B0097184biological_processresponse to azide
B1900745biological_processpositive regulation of p38MAPK cascade
B1900747biological_processnegative regulation of vascular endothelial growth factor signaling pathway
B2000379biological_processpositive regulation of reactive oxygen species metabolic process
B2001213biological_processnegative regulation of vasculogenesis
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue FES A 1401
ChainResidue
AGLN111
ACYS112
AGLY113
ACYS115
ACYS147
AARG148
ACYS149

site_idAC2
Number of Residues10
Detailsbinding site for residue FES A 1402
ChainResidue
AGLY44
AGLY46
AGLY47
ACYS48
AGLY49
ACYS51
AASN71
ACYS73
AGLY42
ACYS43

site_idAC3
Number of Residues22
Detailsbinding site for residue FAD A 1403
ChainResidue
AGLY46
ALEU256
AVAL257
AVAL258
AGLY259
AASN260
ATHR261
AGLU262
AILE263
AALA300
APHE336
AALA337
AALA345
ASER346
AGLY349
AASN350
AILE352
ATHR353
ASER358
AASP359
AILE402
ALEU403

site_idAC4
Number of Residues9
Detailsbinding site for residue URC A 1404
ChainResidue
AGLU802
AARG880
APHE914
ASER1008
APHE1009
ATHR1010
AALA1078
AALA1079
AGLU1261

site_idAC5
Number of Residues9
Detailsbinding site for residue BCT A 1405
ChainResidue
AARG839
AHIS840
AILE877
ATHR909
AALA910
APHE911
APHE914
AGLY915
AGLN918

site_idAC6
Number of Residues6
Detailsbinding site for residue CA A 1406
ChainResidue
AGLY867
ATHR870
AGLU871
ASER874
ASER907
AASN908

site_idAC7
Number of Residues5
Detailsbinding site for residue CA A 1407
ChainResidue
AGLU740
AHIS741
ATYR743
ATHR836
AGLY837

site_idAC8
Number of Residues7
Detailsbinding site for residue FES B 1401
ChainResidue
BGLN111
BCYS112
BGLY113
BCYS115
BCYS147
BARG148
BCYS149

site_idAC9
Number of Residues9
Detailsbinding site for residue FES B 1402
ChainResidue
BGLY42
BCYS43
BGLY44
BGLY46
BCYS48
BGLY49
BCYS51
BASN71
BCYS73

site_idAD1
Number of Residues22
Detailsbinding site for residue FAD B 1403
ChainResidue
BGLY349
BASN350
BILE352
BTHR353
BSER358
BASP359
BLEU403
BGLU45
BGLY46
BLEU256
BVAL257
BVAL258
BGLY259
BASN260
BTHR261
BGLU262
BILE263
BALA300
BPHE336
BVAL344
BALA345
BSER346

site_idAD2
Number of Residues9
Detailsbinding site for residue URC B 1404
ChainResidue
BGLU802
BARG880
BPHE914
BSER1008
BPHE1009
BTHR1010
BALA1078
BALA1079
BGLU1261

site_idAD3
Number of Residues9
Detailsbinding site for residue BCT B 1405
ChainResidue
BARG839
BHIS840
BILE877
BTHR909
BALA910
BPHE911
BPHE914
BGLY915
BGLN918

site_idAD4
Number of Residues6
Detailsbinding site for residue CA B 1406
ChainResidue
BGLY867
BTHR870
BGLU871
BSER874
BSER907
BASN908

site_idAD5
Number of Residues5
Detailsbinding site for residue CA B 1407
ChainResidue
BGLU740
BHIS741
BTYR743
BTHR836
BGLY837

Functional Information from PROSITE/UniProt
site_idPS00197
Number of Residues9
Details2FE2S_FER_1 2Fe-2S ferredoxin-type iron-sulfur binding region signature. CGEGGCGAC
ChainResidueDetails
ACYS43-CYS51

site_idPS00559
Number of Residues36
DetailsMOLYBDOPTERIN_EUK Eukaryotic molybdopterin oxidoreductases signature. GFggKetrstvvstala..LaahKTgrpVrCmlDRdeD
ChainResidueDetails
AGLY797-ASP832

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AGLU1261
BGLU1261

site_idSWS_FT_FI2
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:17301076, ECO:0007744|PDB:2E3T
ChainResidueDetails
ACYS43
BCYS48
BCYS51
BCYS73
BCYS112
BCYS115
BCYS147
BCYS149
ACYS48
ACYS51
ACYS73
ACYS112
ACYS115
ACYS147
ACYS149
BCYS43

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:15878860, ECO:0000269|PubMed:17301076
ChainResidueDetails
ALEU256
ASER346
AASP359
ALEU403
BLEU256
BSER346
BASP359
BLEU403

site_idSWS_FT_FI4
Number of Residues14
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
APHE336
BGLN767
BPHE798
BARG912
BPHE914
BALA1079
ALYS421
AGLN767
APHE798
AARG912
APHE914
AALA1079
BPHE336
BLYS421

site_idSWS_FT_FI5
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AGLU802
AARG880
ATHR1010
BGLU802
BARG880
BTHR1010

218853

건을2024-04-24부터공개중

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