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3PTA

Crystal structure of human DNMT1(646-1600) in complex with DNA

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0003677molecular_functionDNA binding
A0003682molecular_functionchromatin binding
A0008168molecular_functionmethyltransferase activity
A0008270molecular_functionzinc ion binding
PDBデータベースに由来する情報
site_idAC1
残基数16
詳細BINDING SITE FOR RESIDUE SAH A 1601
鎖名残基
APHE1145
ACYS1191
APRO1225
ALEU1247
AGLU1266
AASN1578
AALA1579
AVAL1580
ASER1146
AGLY1147
AGLY1150
ALEU1151
AGLU1168
AMET1169
ATRP1170
AGLU1189

site_idAC2
残基数4
詳細BINDING SITE FOR RESIDUE ZN A 1
鎖名残基
ACYS1476
ACYS1478
ACYS1485
AHIS1502

site_idAC3
残基数4
詳細BINDING SITE FOR RESIDUE ZN A 2
鎖名残基
ACYS653
ACYS656
ACYS659
ACYS691

site_idAC4
残基数4
詳細BINDING SITE FOR RESIDUE ZN A 3
鎖名残基
AHIS793
ACYS820
ACYS893
ACYS896

site_idAC5
残基数5
詳細BINDING SITE FOR RESIDUE ZN A 5
鎖名残基
ACYS664
ACYS667
ACYS670
ACYS686
AGLN687

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS00094
残基数13
詳細C5_MTASE_1 C-5 cytosine-specific DNA methylases active site. EmLcgGpPCqGFS
鎖名残基詳細
AGLU1218-SER1230

site_idPS00095
残基数19
詳細C5_MTASE_2 C-5 cytosine-specific DNA methylases C-terminal signature. RqvGNAVpPpLakaIgleI
鎖名残基詳細
AARG1574-ILE1592

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数46
詳細ZN_FING: CXXC-type => ECO:0000255|PROSITE-ProRule:PRU00509
鎖名残基詳細
AASN646-PRO692

site_idSWS_FT_FI2
残基数1
詳細ACT_SITE:
鎖名残基詳細
ACYS1226

site_idSWS_FT_FI3
残基数8
詳細BINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00509
鎖名残基詳細
ACYS653
ACYS656
ACYS659
ACYS667
ACYS670
ACYS686
ACYS691
ACYS664

site_idSWS_FT_FI4
残基数4
詳細BINDING: BINDING => ECO:0000250|UniProtKB:P13864
鎖名残基詳細
ASER1146
AGLY1150
AASP1190
AVAL1580

site_idSWS_FT_FI5
残基数3
詳細BINDING: BINDING => ECO:0000269|PubMed:21163962, ECO:0007744|PDB:3PTA
鎖名残基詳細
ACYS1191
AASN1578
AGLU1168

site_idSWS_FT_FI6
残基数1
詳細MOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
鎖名残基詳細
ASER714

site_idSWS_FT_FI7
残基数1
詳細MOD_RES: Phosphoserine => ECO:0007744|PubMed:18220336
鎖名残基詳細
ASER732

site_idSWS_FT_FI8
残基数8
詳細MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:21947282
鎖名残基詳細
ALYS891
ALYS957
ALYS961
ALYS975
ALYS1054
ALYS1349
ALYS1415
ALYS749

site_idSWS_FT_FI9
残基数1
詳細MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
鎖名残基詳細
ASER878

site_idSWS_FT_FI10
残基数3
詳細MOD_RES: N6-acetyllysine => ECO:0000269|PubMed:21947282, ECO:0007744|PubMed:19608861
鎖名残基詳細
ALYS1113
ALYS1115
ALYS1111

site_idSWS_FT_FI11
残基数1
詳細MOD_RES: N6-acetyllysine; by EHMT2 => ECO:0000269|PubMed:21947282
鎖名残基詳細
ALYS1117

site_idSWS_FT_FI12
残基数2
詳細MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P13864
鎖名残基詳細
ALYS1121
ALYS1119

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件を2024-04-17に公開中

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