3CMC
Thioacylenzyme intermediate of Bacillus stearothermophilus phosphorylating GAPDH
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
O | 0000166 | molecular_function | nucleotide binding |
O | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
O | 0005737 | cellular_component | cytoplasm |
O | 0006006 | biological_process | glucose metabolic process |
O | 0006096 | biological_process | glycolytic process |
O | 0016491 | molecular_function | oxidoreductase activity |
O | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
O | 0030554 | molecular_function | adenyl nucleotide binding |
O | 0050661 | molecular_function | NADP binding |
O | 0051287 | molecular_function | NAD binding |
P | 0000166 | molecular_function | nucleotide binding |
P | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
P | 0005737 | cellular_component | cytoplasm |
P | 0006006 | biological_process | glucose metabolic process |
P | 0006096 | biological_process | glycolytic process |
P | 0016491 | molecular_function | oxidoreductase activity |
P | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
P | 0030554 | molecular_function | adenyl nucleotide binding |
P | 0050661 | molecular_function | NADP binding |
P | 0051287 | molecular_function | NAD binding |
Q | 0000166 | molecular_function | nucleotide binding |
Q | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
Q | 0005737 | cellular_component | cytoplasm |
Q | 0006006 | biological_process | glucose metabolic process |
Q | 0006096 | biological_process | glycolytic process |
Q | 0016491 | molecular_function | oxidoreductase activity |
Q | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
Q | 0030554 | molecular_function | adenyl nucleotide binding |
Q | 0050661 | molecular_function | NADP binding |
Q | 0051287 | molecular_function | NAD binding |
R | 0000166 | molecular_function | nucleotide binding |
R | 0004365 | molecular_function | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity |
R | 0005737 | cellular_component | cytoplasm |
R | 0006006 | biological_process | glucose metabolic process |
R | 0006096 | biological_process | glycolytic process |
R | 0016491 | molecular_function | oxidoreductase activity |
R | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
R | 0030554 | molecular_function | adenyl nucleotide binding |
R | 0050661 | molecular_function | NADP binding |
R | 0051287 | molecular_function | NAD binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 401 |
鎖名 | 残基 |
O | SER148 |
O | THR207 |
O | THR208 |
O | GLY209 |
O | ALA210 |
site_id | AC2 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 P 401 |
鎖名 | 残基 |
P | GLY209 |
P | ALA210 |
P | PRO121 |
P | SER148 |
P | THR207 |
P | THR208 |
site_id | AC3 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 Q 401 |
鎖名 | 残基 |
Q | PRO121 |
Q | SER148 |
Q | THR207 |
Q | THR208 |
Q | GLY209 |
Q | ALA210 |
site_id | AC4 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 401 |
鎖名 | 残基 |
R | SER148 |
R | THR207 |
R | THR208 |
R | GLY209 |
R | ALA210 |
site_id | AC5 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 402 |
鎖名 | 残基 |
O | THR179 |
O | ASP181 |
O | ARG195 |
O | ARG231 |
site_id | AC6 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 P 402 |
鎖名 | 残基 |
P | THR179 |
P | ASP181 |
P | ARG195 |
P | ARG231 |
site_id | AC7 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 Q 402 |
鎖名 | 残基 |
Q | THR179 |
Q | ASP181 |
Q | ARG195 |
Q | ARG231 |
site_id | AC8 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 402 |
鎖名 | 残基 |
R | THR179 |
R | ASP181 |
R | ARG195 |
R | ARG231 |
site_id | AC9 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 403 |
鎖名 | 残基 |
O | ARG169 |
P | LYS303 |
site_id | BC1 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 404 |
鎖名 | 残基 |
O | ARG183 |
O | HIS190 |
O | LYS191 |
site_id | BC2 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 403 |
鎖名 | 残基 |
Q | LYS303 |
R | ARG169 |
site_id | BC3 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE SO4 Q 403 |
鎖名 | 残基 |
Q | ARG183 |
Q | PRO188 |
Q | HIS190 |
Q | LYS191 |
site_id | BC4 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 404 |
鎖名 | 残基 |
R | ARG52 |
site_id | BC5 |
残基数 | 1 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 405 |
鎖名 | 残基 |
R | SER58 |
site_id | BC6 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 405 |
鎖名 | 残基 |
O | ASN62 |
O | ASN63 |
site_id | BC7 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 406 |
鎖名 | 残基 |
R | ARG183 |
R | HIS190 |
R | LYS191 |
site_id | BC8 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 R 407 |
鎖名 | 残基 |
P | ASP138 |
P | LYS139 |
R | LEU109 |
R | GLY112 |
R | ALA113 |
R | LYS114 |
site_id | BC9 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE SO4 O 406 |
鎖名 | 残基 |
O | GLY85 |
O | ALA111 |
O | GLY112 |
site_id | CC1 |
残基数 | 8 |
詳細 | BINDING SITE FOR RESIDUE G3H O 400 |
鎖名 | 残基 |
O | SER148 |
O | CYS149 |
O | THR150 |
O | HIS176 |
O | THR179 |
O | THR208 |
O | GLY209 |
O | ARG231 |
site_id | CC2 |
残基数 | 7 |
詳細 | BINDING SITE FOR RESIDUE G3H P 400 |
鎖名 | 残基 |
P | SER148 |
P | CYS149 |
P | THR150 |
P | HIS176 |
P | THR208 |
P | GLY209 |
P | ARG231 |
site_id | CC3 |
残基数 | 8 |
詳細 | BINDING SITE FOR RESIDUE G3H Q 400 |
鎖名 | 残基 |
Q | SER148 |
Q | CYS149 |
Q | THR150 |
Q | HIS176 |
Q | THR179 |
Q | THR208 |
Q | GLY209 |
Q | ARG231 |
site_id | CC4 |
残基数 | 8 |
詳細 | BINDING SITE FOR RESIDUE G3H R 400 |
鎖名 | 残基 |
R | SER148 |
R | CYS149 |
R | THR150 |
R | HIS176 |
R | THR179 |
R | THR208 |
R | GLY209 |
R | ARG231 |
site_id | CC5 |
残基数 | 19 |
詳細 | BINDING SITE FOR RESIDUE NAD O 407 |
鎖名 | 残基 |
O | ILE11 |
O | ASN31 |
O | ASP32 |
O | LEU33 |
O | ARG77 |
O | SER95 |
O | THR96 |
O | GLY97 |
O | ARG98 |
O | PHE99 |
O | SER119 |
O | ALA120 |
O | ASN180 |
O | ASN313 |
O | TYR317 |
R | LEU187 |
O | GLY7 |
O | GLY9 |
O | ARG10 |
site_id | CC6 |
残基数 | 16 |
詳細 | BINDING SITE FOR RESIDUE NAD P 403 |
鎖名 | 残基 |
P | GLY7 |
P | GLY9 |
P | ARG10 |
P | ILE11 |
P | ASN31 |
P | ASP32 |
P | LEU33 |
P | ARG77 |
P | SER95 |
P | THR96 |
P | GLY97 |
P | SER119 |
P | ALA120 |
P | ASN180 |
P | ASN313 |
P | TYR317 |
site_id | CC7 |
残基数 | 18 |
詳細 | BINDING SITE FOR RESIDUE NAD Q 404 |
鎖名 | 残基 |
Q | GLY7 |
Q | GLY9 |
Q | ARG10 |
Q | ILE11 |
Q | ASN31 |
Q | ASP32 |
Q | LEU33 |
Q | ARG77 |
Q | SER95 |
Q | THR96 |
Q | GLY97 |
Q | ARG98 |
Q | PHE99 |
Q | SER119 |
Q | ALA120 |
Q | ASN180 |
Q | ASN313 |
Q | TYR317 |
site_id | CC8 |
残基数 | 18 |
詳細 | BINDING SITE FOR RESIDUE NAD R 408 |
鎖名 | 残基 |
R | GLY7 |
R | GLY9 |
R | ARG10 |
R | ILE11 |
R | ASN31 |
R | ASP32 |
R | LEU33 |
R | ARG77 |
R | SER95 |
R | THR96 |
R | GLY97 |
R | ARG98 |
R | PHE99 |
R | SER119 |
R | ALA120 |
R | ASN180 |
R | ASN313 |
R | TYR317 |
site_id | CC9 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE EDO Q 405 |
鎖名 | 残基 |
Q | GLN134 |
Q | ASP135 |
Q | LYS159 |
site_id | DC1 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE GOL R 409 |
鎖名 | 残基 |
Q | ARG169 |
R | LYS303 |
site_id | DC2 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE GOL P 404 |
鎖名 | 残基 |
P | GLY131 |
P | GLN134 |
P | ASP135 |
P | LYS159 |
site_id | DC3 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE GOL P 405 |
鎖名 | 残基 |
P | ASP181 |
P | ARG183 |
P | PRO188 |
P | HIS190 |
P | LYS191 |
site_id | DC4 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE GOL O 408 |
鎖名 | 残基 |
O | LYS303 |
P | ARG169 |
site_id | DC5 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE GOL R 410 |
鎖名 | 残基 |
R | GLN134 |
R | ASP135 |
site_id | DC6 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE GOL P 406 |
鎖名 | 残基 |
P | LYS212 |
P | ALA215 |
P | GLY223 |
site_id | DC7 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE GOL Q 406 |
鎖名 | 残基 |
Q | ASN14 |
Q | ARG17 |
Q | HIS50 |
Q | THR315 |
site_id | DC8 |
残基数 | 3 |
詳細 | BINDING SITE FOR RESIDUE GOL P 407 |
鎖名 | 残基 |
P | HIS50 |
P | GLY51 |
R | ARG281 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00071 |
残基数 | 8 |
詳細 | GAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL |
鎖名 | 残基 | 詳細 |
O | ALA147-LEU154 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 4 |
詳細 | ACT_SITE: Nucleophile => ECO:0000269|PubMed:18480053, ECO:0000305|PubMed:12569100 |
鎖名 | 残基 | 詳細 |
O | CYS149 | |
P | CYS149 | |
Q | CYS149 | |
R | CYS149 |
site_id | SWS_FT_FI2 |
残基数 | 24 |
詳細 | BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858 |
鎖名 | 残基 | 詳細 |
O | ARG10 | |
P | SER119 | |
P | ASN180 | |
P | ASN313 | |
Q | ARG10 | |
Q | ASP32 | |
Q | ARG77 | |
Q | SER119 | |
Q | ASN180 | |
Q | ASN313 | |
R | ARG10 | |
O | ASP32 | |
R | ASP32 | |
R | ARG77 | |
R | SER119 | |
R | ASN180 | |
R | ASN313 | |
O | ARG77 | |
O | SER119 | |
O | ASN180 | |
O | ASN313 | |
P | ARG10 | |
P | ASP32 | |
P | ARG77 |
site_id | SWS_FT_FI3 |
残基数 | 12 |
詳細 | BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3210237, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858 |
鎖名 | 残基 | 詳細 |
O | SER148 | |
R | SER148 | |
R | THR179 | |
R | ARG231 | |
O | THR179 | |
O | ARG231 | |
P | SER148 | |
P | THR179 | |
P | ARG231 | |
Q | SER148 | |
Q | THR179 | |
Q | ARG231 |
site_id | SWS_FT_FI4 |
残基数 | 4 |
詳細 | BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:9175858 |
鎖名 | 残基 | 詳細 |
O | ARG195 | |
P | ARG195 | |
Q | ARG195 | |
R | ARG195 |
site_id | SWS_FT_FI5 |
残基数 | 4 |
詳細 | BINDING: BINDING => ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3210237, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858 |
鎖名 | 残基 | 詳細 |
O | THR208 | |
P | THR208 | |
Q | THR208 | |
R | THR208 |
site_id | SWS_FT_FI6 |
残基数 | 4 |
詳細 | SITE: Activates thiol group during catalysis => ECO:0000250|UniProtKB:Q6GIL8 |
鎖名 | 残基 | 詳細 |
O | HIS176 | |
P | HIS176 | |
Q | HIS176 | |
R | HIS176 |