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3CMC

Thioacylenzyme intermediate of Bacillus stearothermophilus phosphorylating GAPDH

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
O0000166molecular_functionnucleotide binding
O0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
O0005737cellular_componentcytoplasm
O0006006biological_processglucose metabolic process
O0006096biological_processglycolytic process
O0016491molecular_functionoxidoreductase activity
O0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
O0030554molecular_functionadenyl nucleotide binding
O0050661molecular_functionNADP binding
O0051287molecular_functionNAD binding
P0000166molecular_functionnucleotide binding
P0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
P0005737cellular_componentcytoplasm
P0006006biological_processglucose metabolic process
P0006096biological_processglycolytic process
P0016491molecular_functionoxidoreductase activity
P0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
P0030554molecular_functionadenyl nucleotide binding
P0050661molecular_functionNADP binding
P0051287molecular_functionNAD binding
Q0000166molecular_functionnucleotide binding
Q0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Q0005737cellular_componentcytoplasm
Q0006006biological_processglucose metabolic process
Q0006096biological_processglycolytic process
Q0016491molecular_functionoxidoreductase activity
Q0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
Q0030554molecular_functionadenyl nucleotide binding
Q0050661molecular_functionNADP binding
Q0051287molecular_functionNAD binding
R0000166molecular_functionnucleotide binding
R0004365molecular_functionglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
R0005737cellular_componentcytoplasm
R0006006biological_processglucose metabolic process
R0006096biological_processglycolytic process
R0016491molecular_functionoxidoreductase activity
R0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
R0030554molecular_functionadenyl nucleotide binding
R0050661molecular_functionNADP binding
R0051287molecular_functionNAD binding
PDBデータベースに由来する情報
site_idAC1
残基数5
詳細BINDING SITE FOR RESIDUE SO4 O 401
鎖名残基
OSER148
OTHR207
OTHR208
OGLY209
OALA210

site_idAC2
残基数6
詳細BINDING SITE FOR RESIDUE SO4 P 401
鎖名残基
PGLY209
PALA210
PPRO121
PSER148
PTHR207
PTHR208

site_idAC3
残基数6
詳細BINDING SITE FOR RESIDUE SO4 Q 401
鎖名残基
QPRO121
QSER148
QTHR207
QTHR208
QGLY209
QALA210

site_idAC4
残基数5
詳細BINDING SITE FOR RESIDUE SO4 R 401
鎖名残基
RSER148
RTHR207
RTHR208
RGLY209
RALA210

site_idAC5
残基数4
詳細BINDING SITE FOR RESIDUE SO4 O 402
鎖名残基
OTHR179
OASP181
OARG195
OARG231

site_idAC6
残基数4
詳細BINDING SITE FOR RESIDUE SO4 P 402
鎖名残基
PTHR179
PASP181
PARG195
PARG231

site_idAC7
残基数4
詳細BINDING SITE FOR RESIDUE SO4 Q 402
鎖名残基
QTHR179
QASP181
QARG195
QARG231

site_idAC8
残基数4
詳細BINDING SITE FOR RESIDUE SO4 R 402
鎖名残基
RTHR179
RASP181
RARG195
RARG231

site_idAC9
残基数2
詳細BINDING SITE FOR RESIDUE SO4 O 403
鎖名残基
OARG169
PLYS303

site_idBC1
残基数3
詳細BINDING SITE FOR RESIDUE SO4 O 404
鎖名残基
OARG183
OHIS190
OLYS191

site_idBC2
残基数2
詳細BINDING SITE FOR RESIDUE SO4 R 403
鎖名残基
QLYS303
RARG169

site_idBC3
残基数4
詳細BINDING SITE FOR RESIDUE SO4 Q 403
鎖名残基
QARG183
QPRO188
QHIS190
QLYS191

site_idBC4
残基数1
詳細BINDING SITE FOR RESIDUE SO4 R 404
鎖名残基
RARG52

site_idBC5
残基数1
詳細BINDING SITE FOR RESIDUE SO4 R 405
鎖名残基
RSER58

site_idBC6
残基数2
詳細BINDING SITE FOR RESIDUE SO4 O 405
鎖名残基
OASN62
OASN63

site_idBC7
残基数3
詳細BINDING SITE FOR RESIDUE SO4 R 406
鎖名残基
RARG183
RHIS190
RLYS191

site_idBC8
残基数6
詳細BINDING SITE FOR RESIDUE SO4 R 407
鎖名残基
PASP138
PLYS139
RLEU109
RGLY112
RALA113
RLYS114

site_idBC9
残基数3
詳細BINDING SITE FOR RESIDUE SO4 O 406
鎖名残基
OGLY85
OALA111
OGLY112

site_idCC1
残基数8
詳細BINDING SITE FOR RESIDUE G3H O 400
鎖名残基
OSER148
OCYS149
OTHR150
OHIS176
OTHR179
OTHR208
OGLY209
OARG231

site_idCC2
残基数7
詳細BINDING SITE FOR RESIDUE G3H P 400
鎖名残基
PSER148
PCYS149
PTHR150
PHIS176
PTHR208
PGLY209
PARG231

site_idCC3
残基数8
詳細BINDING SITE FOR RESIDUE G3H Q 400
鎖名残基
QSER148
QCYS149
QTHR150
QHIS176
QTHR179
QTHR208
QGLY209
QARG231

site_idCC4
残基数8
詳細BINDING SITE FOR RESIDUE G3H R 400
鎖名残基
RSER148
RCYS149
RTHR150
RHIS176
RTHR179
RTHR208
RGLY209
RARG231

site_idCC5
残基数19
詳細BINDING SITE FOR RESIDUE NAD O 407
鎖名残基
OILE11
OASN31
OASP32
OLEU33
OARG77
OSER95
OTHR96
OGLY97
OARG98
OPHE99
OSER119
OALA120
OASN180
OASN313
OTYR317
RLEU187
OGLY7
OGLY9
OARG10

site_idCC6
残基数16
詳細BINDING SITE FOR RESIDUE NAD P 403
鎖名残基
PGLY7
PGLY9
PARG10
PILE11
PASN31
PASP32
PLEU33
PARG77
PSER95
PTHR96
PGLY97
PSER119
PALA120
PASN180
PASN313
PTYR317

site_idCC7
残基数18
詳細BINDING SITE FOR RESIDUE NAD Q 404
鎖名残基
QGLY7
QGLY9
QARG10
QILE11
QASN31
QASP32
QLEU33
QARG77
QSER95
QTHR96
QGLY97
QARG98
QPHE99
QSER119
QALA120
QASN180
QASN313
QTYR317

site_idCC8
残基数18
詳細BINDING SITE FOR RESIDUE NAD R 408
鎖名残基
RGLY7
RGLY9
RARG10
RILE11
RASN31
RASP32
RLEU33
RARG77
RSER95
RTHR96
RGLY97
RARG98
RPHE99
RSER119
RALA120
RASN180
RASN313
RTYR317

site_idCC9
残基数3
詳細BINDING SITE FOR RESIDUE EDO Q 405
鎖名残基
QGLN134
QASP135
QLYS159

site_idDC1
残基数2
詳細BINDING SITE FOR RESIDUE GOL R 409
鎖名残基
QARG169
RLYS303

site_idDC2
残基数4
詳細BINDING SITE FOR RESIDUE GOL P 404
鎖名残基
PGLY131
PGLN134
PASP135
PLYS159

site_idDC3
残基数5
詳細BINDING SITE FOR RESIDUE GOL P 405
鎖名残基
PASP181
PARG183
PPRO188
PHIS190
PLYS191

site_idDC4
残基数2
詳細BINDING SITE FOR RESIDUE GOL O 408
鎖名残基
OLYS303
PARG169

site_idDC5
残基数2
詳細BINDING SITE FOR RESIDUE GOL R 410
鎖名残基
RGLN134
RASP135

site_idDC6
残基数3
詳細BINDING SITE FOR RESIDUE GOL P 406
鎖名残基
PLYS212
PALA215
PGLY223

site_idDC7
残基数4
詳細BINDING SITE FOR RESIDUE GOL Q 406
鎖名残基
QASN14
QARG17
QHIS50
QTHR315

site_idDC8
残基数3
詳細BINDING SITE FOR RESIDUE GOL P 407
鎖名残基
PHIS50
PGLY51
RARG281

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS00071
残基数8
詳細GAPDH Glyceraldehyde 3-phosphate dehydrogenase active site. ASCTTNcL
鎖名残基詳細
OALA147-LEU154

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数4
詳細ACT_SITE: Nucleophile => ECO:0000269|PubMed:18480053, ECO:0000305|PubMed:12569100
鎖名残基詳細
OCYS149
PCYS149
QCYS149
RCYS149

site_idSWS_FT_FI2
残基数24
詳細BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858
鎖名残基詳細
OARG10
PSER119
PASN180
PASN313
QARG10
QASP32
QARG77
QSER119
QASN180
QASN313
RARG10
OASP32
RASP32
RARG77
RSER119
RASN180
RASN313
OARG77
OSER119
OASN180
OASN313
PARG10
PASP32
PARG77

site_idSWS_FT_FI3
残基数12
詳細BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3210237, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858
鎖名残基詳細
OSER148
RSER148
RTHR179
RARG231
OTHR179
OARG231
PSER148
PTHR179
PARG231
QSER148
QTHR179
QARG231

site_idSWS_FT_FI4
残基数4
詳細BINDING: BINDING => ECO:0000269|PubMed:12569100, ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:9175858
鎖名残基詳細
OARG195
PARG195
QARG195
RARG195

site_idSWS_FT_FI5
残基数4
詳細BINDING: BINDING => ECO:0000269|PubMed:18480053, ECO:0000269|PubMed:3210237, ECO:0000269|PubMed:3586018, ECO:0000269|PubMed:9175858
鎖名残基詳細
OTHR208
PTHR208
QTHR208
RTHR208

site_idSWS_FT_FI6
残基数4
詳細SITE: Activates thiol group during catalysis => ECO:0000250|UniProtKB:Q6GIL8
鎖名残基詳細
OHIS176
PHIS176
QHIS176
RHIS176

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件を2024-03-27に公開中

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