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2V88

Crystal structure of RAG2-PHD finger in complex with H3R2me2sK4me2 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0005634cellular_componentnucleus
A0006310biological_processDNA recombination
B0003677molecular_functionDNA binding
B0005634cellular_componentnucleus
B0006310biological_processDNA recombination
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1488
ChainResidue
ACYS419
ACYS423
AHIS455
ACYS458

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1489
ChainResidue
ACYS446
AHIS452
ACYS478
AHIS481

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1488
ChainResidue
BCYS423
BHIS455
BCYS458
BCYS419

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 1489
ChainResidue
BCYS446
BHIS452
BCYS478
BHIS481

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: Citrulline; alternate => ECO:0000269|PubMed:16567635
ChainResidueDetails
D2MR2
F2MR2

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphothreonine; by HASPIN => ECO:0000269|PubMed:15681610, ECO:0000269|PubMed:16185088
ChainResidueDetails
DTHR3
FTHR3
BCYS419
BCYS423
BCYS446
BHIS452
BHIS455
BCYS458
BCYS478
BHIS481
ACYS446
AHIS452
AHIS455
ACYS458
ACYS478
AHIS481

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:16267050, ECO:0000269|PubMed:16457588, ECO:0000269|PubMed:17194708
ChainResidueDetails
DMLY4
FMLY4

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: 5-glutamyl serotonin; alternate => ECO:0000269|PubMed:30867594
ChainResidueDetails
DGLN5
FGLN5

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphothreonine; by PKC => ECO:0000269|PubMed:20228790
ChainResidueDetails
DTHR6
FTHR6

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Symmetric dimethylarginine; by PRMT5; alternate => ECO:0000250|UniProtKB:P68433
ChainResidueDetails
DALA8
FALA8

218500

数据于2024-04-17公开中

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