2JIF
Structure of human short-branched chain acyl-CoA dehydrogenase (ACADSB)
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
C | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
D | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL A1436 |
鎖名 | 残基 |
A | ASP108 |
A | ARG151 |
site_id | AC2 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL A1437 |
鎖名 | 残基 |
A | HIS213 |
A | SER259 |
site_id | AC3 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL B1436 |
鎖名 | 残基 |
B | ASP108 |
B | ARG151 |
site_id | AC4 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL B1437 |
鎖名 | 残基 |
B | HIS213 |
B | SER259 |
site_id | AC5 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL B1438 |
鎖名 | 残基 |
B | TYR373 |
A | TYR373 |
site_id | AC6 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL C1436 |
鎖名 | 残基 |
C | ASP108 |
C | ARG151 |
site_id | AC7 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL C1437 |
鎖名 | 残基 |
C | SER259 |
C | HOH2141 |
site_id | AC8 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL D1439 |
鎖名 | 残基 |
D | ASP108 |
D | ARG151 |
site_id | AC9 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL D1440 |
鎖名 | 残基 |
D | HIS213 |
D | SER259 |
site_id | BC1 |
残基数 | 2 |
詳細 | BINDING SITE FOR RESIDUE CL D1441 |
鎖名 | 残基 |
C | TYR373 |
D | TYR373 |
site_id | BC2 |
残基数 | 32 |
詳細 | BINDING SITE FOR RESIDUE FAD A1433 |
鎖名 | 残基 |
A | PHE174 |
A | LEU176 |
A | SER177 |
A | GLY182 |
A | SER183 |
A | TRP207 |
A | SER209 |
A | THR260 |
A | ILE409 |
A | ILE412 |
A | ALA416 |
A | ASN418 |
A | ILE419 |
A | ASN422 |
A | COS1434 |
A | HOH2182 |
A | HOH2195 |
A | HOH2196 |
A | HOH2197 |
A | HOH2198 |
A | HOH2199 |
B | GLN330 |
C | ARG319 |
C | GLN321 |
C | PHE322 |
C | LEU326 |
C | PHE329 |
C | LEU332 |
C | GLU387 |
C | TRP388 |
C | GLY391 |
C | HOH2203 |
site_id | BC3 |
残基数 | 19 |
詳細 | BINDING SITE FOR RESIDUE COS A1434 |
鎖名 | 残基 |
A | SER183 |
A | SER185 |
A | TYR229 |
A | LYS230 |
A | TYR283 |
A | ILE287 |
A | LEU290 |
A | ASN291 |
A | ARG294 |
A | TYR413 |
A | GLU414 |
A | GLY415 |
A | ILE419 |
A | FAD1433 |
A | HOH2062 |
A | HOH2185 |
A | HOH2201 |
A | HOH2202 |
C | PHE322 |
site_id | BC4 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE EDO A1435 |
鎖名 | 残基 |
A | VAL131 |
A | PRO399 |
A | TYR403 |
A | HOH2203 |
A | HOH2204 |
site_id | BC5 |
残基数 | 33 |
詳細 | BINDING SITE FOR RESIDUE FAD B1433 |
鎖名 | 残基 |
D | ARG319 |
D | GLN321 |
D | PHE322 |
D | LEU326 |
D | PHE329 |
D | LEU332 |
D | GLU387 |
D | TRP388 |
D | GLY391 |
D | HOH2227 |
A | GLN330 |
B | PHE174 |
B | LEU176 |
B | SER177 |
B | GLY182 |
B | SER183 |
B | TRP207 |
B | SER209 |
B | LYS252 |
B | THR260 |
B | ILE409 |
B | ILE412 |
B | ALA416 |
B | ASN418 |
B | ASN422 |
B | COS1434 |
B | HOH2181 |
B | HOH2193 |
B | HOH2194 |
B | HOH2195 |
B | HOH2196 |
B | HOH2197 |
B | HOH2198 |
site_id | BC6 |
残基数 | 18 |
詳細 | BINDING SITE FOR RESIDUE COS B1434 |
鎖名 | 残基 |
B | SER183 |
B | SER185 |
B | PHE186 |
B | TYR229 |
B | TYR283 |
B | ILE287 |
B | LEU290 |
B | ASN291 |
B | ARG294 |
B | TYR413 |
B | GLU414 |
B | GLY415 |
B | ILE419 |
B | FAD1433 |
B | HOH2200 |
B | HOH2201 |
B | HOH2202 |
D | PHE322 |
site_id | BC7 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE EDO B1435 |
鎖名 | 残基 |
B | ARG256 |
B | HOH2203 |
B | HOH2204 |
D | ARG256 |
D | HOH2030 |
D | HOH2231 |
site_id | BC8 |
残基数 | 31 |
詳細 | BINDING SITE FOR RESIDUE FAD C1433 |
鎖名 | 残基 |
A | ARG319 |
A | GLN321 |
A | PHE322 |
A | LEU326 |
A | PHE329 |
A | LEU332 |
A | GLU387 |
A | TRP388 |
A | GLY391 |
A | HOH2166 |
C | PHE174 |
C | LEU176 |
C | SER177 |
C | GLY182 |
C | SER183 |
C | TRP207 |
C | SER209 |
C | THR260 |
C | ILE409 |
C | ILE412 |
C | ALA416 |
C | ASN418 |
C | ASN422 |
C | COS1434 |
C | HOH2113 |
C | HOH2226 |
C | HOH2227 |
C | HOH2228 |
C | HOH2229 |
C | HOH2230 |
D | GLN330 |
site_id | BC9 |
残基数 | 21 |
詳細 | BINDING SITE FOR RESIDUE COS C1434 |
鎖名 | 残基 |
C | SER183 |
C | SER185 |
C | PHE186 |
C | TYR229 |
C | LYS230 |
C | TYR283 |
C | ILE287 |
C | ASN291 |
C | ARG294 |
C | TYR413 |
C | GLU414 |
C | GLY415 |
C | ILE419 |
C | FAD1433 |
C | HOH2089 |
C | HOH2220 |
C | HOH2221 |
C | HOH2231 |
C | HOH2232 |
C | HOH2233 |
C | HOH2234 |
site_id | CC1 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE EDO C1435 |
鎖名 | 残基 |
C | VAL131 |
C | PRO399 |
C | TYR403 |
C | HOH2235 |
C | HOH2236 |
site_id | CC2 |
残基数 | 32 |
詳細 | BINDING SITE FOR RESIDUE FAD D1433 |
鎖名 | 残基 |
B | ARG319 |
B | PHE322 |
B | LEU326 |
B | PHE329 |
B | LEU332 |
B | GLU387 |
B | TRP388 |
B | GLY391 |
B | HOH2165 |
C | GLN330 |
D | PHE174 |
D | LEU176 |
D | SER177 |
D | GLY182 |
D | SER183 |
D | TRP207 |
D | ILE208 |
D | SER209 |
D | ILE409 |
D | ILE412 |
D | ALA416 |
D | ASN418 |
D | ILE419 |
D | ASN422 |
D | COS1434 |
D | HOH2241 |
D | HOH2243 |
D | HOH2255 |
D | HOH2256 |
D | HOH2257 |
D | HOH2258 |
D | HOH2259 |
site_id | CC3 |
残基数 | 23 |
詳細 | BINDING SITE FOR RESIDUE COS D1434 |
鎖名 | 残基 |
D | SER183 |
D | SER185 |
D | PHE186 |
D | TYR229 |
D | TYR283 |
D | ILE287 |
D | LEU290 |
D | ASN291 |
D | ARG294 |
D | ILE364 |
D | TYR413 |
D | GLU414 |
D | GLY415 |
D | ILE419 |
D | FAD1433 |
D | EDO1437 |
D | HOH2097 |
D | HOH2261 |
D | HOH2262 |
D | HOH2263 |
D | HOH2264 |
D | HOH2265 |
D | HOH2267 |
site_id | CC4 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE EDO D1435 |
鎖名 | 残基 |
C | LYS88 |
D | GLN158 |
D | TYR162 |
D | LEU236 |
D | ALA273 |
D | ASN274 |
site_id | CC5 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE EDO D1436 |
鎖名 | 残基 |
C | LYS91 |
D | VAL237 |
D | ASP238 |
D | THR241 |
D | ASN274 |
site_id | CC6 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE EDO D1437 |
鎖名 | 残基 |
B | PHE322 |
D | ILE419 |
D | ASN422 |
D | COS1434 |
D | HOH2267 |
site_id | CC7 |
残基数 | 4 |
詳細 | BINDING SITE FOR RESIDUE EDO D1438 |
鎖名 | 残基 |
D | VAL131 |
D | PRO399 |
D | TYR403 |
D | HOH2269 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 4 |
詳細 | ACT_SITE: Proton acceptor => ECO:0000305|Ref.15 |
鎖名 | 残基 | 詳細 |
A | GLU414 | |
B | GLU414 | |
C | GLU414 | |
D | GLU414 |
site_id | SWS_FT_FI2 |
残基数 | 12 |
詳細 | BINDING: in other chain => ECO:0000269|Ref.15 |
鎖名 | 残基 | 詳細 |
A | PHE174 | |
D | PHE174 | |
D | TRP207 | |
D | ALA416 | |
A | TRP207 | |
A | ALA416 | |
B | PHE174 | |
B | TRP207 | |
B | ALA416 | |
C | PHE174 | |
C | TRP207 | |
C | ALA416 |
site_id | SWS_FT_FI3 |
残基数 | 28 |
詳細 | BINDING: BINDING => ECO:0000269|Ref.15 |
鎖名 | 残基 | 詳細 |
A | SER183 | |
B | TYR283 | |
B | ASN291 | |
B | ARG319 | |
B | GLN330 | |
B | GLU387 | |
C | SER183 | |
C | TYR229 | |
C | TYR283 | |
C | ASN291 | |
C | ARG319 | |
A | TYR229 | |
C | GLN330 | |
C | GLU387 | |
D | SER183 | |
D | TYR229 | |
D | TYR283 | |
D | ASN291 | |
D | ARG319 | |
D | GLN330 | |
D | GLU387 | |
A | TYR283 | |
A | ASN291 | |
A | ARG319 | |
A | GLN330 | |
A | GLU387 | |
B | SER183 | |
B | TYR229 |
site_id | SWS_FT_FI4 |
残基数 | 8 |
詳細 | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q9DBL1 |
鎖名 | 残基 | 詳細 |
A | LYS70 | |
A | LYS284 | |
B | LYS70 | |
B | LYS284 | |
C | LYS70 | |
C | LYS284 | |
D | LYS70 | |
D | LYS284 |
site_id | SWS_FT_FI5 |
残基数 | 4 |
詳細 | MOD_RES: Phosphoserine => ECO:0007744|PubMed:24275569 |
鎖名 | 残基 | 詳細 |
A | SER183 | |
B | SER183 | |
C | SER183 | |
D | SER183 |
site_id | SWS_FT_FI6 |
残基数 | 4 |
詳細 | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q9DBL1 |
鎖名 | 残基 | 詳細 |
A | LYS426 | |
B | LYS426 | |
C | LYS426 | |
D | LYS426 |