2EQ7
Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdo
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
A | 0045252 | cellular_component | oxoglutarate dehydrogenase complex |
A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004148 | molecular_function | dihydrolipoyl dehydrogenase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor |
B | 0045252 | cellular_component | oxoglutarate dehydrogenase complex |
B | 0050660 | molecular_function | flavin adenine dinucleotide binding |
C | 0016746 | molecular_function | acyltransferase activity |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 38 |
詳細 | BINDING SITE FOR RESIDUE FAD A 2482 |
鎖名 | 残基 |
A | GLY8 |
A | CYS40 |
A | ARG42 |
A | GLY44 |
A | CYS45 |
A | LYS49 |
A | GLY109 |
A | THR110 |
A | ALA111 |
A | ALA136 |
A | THR137 |
A | GLY10 |
A | GLY138 |
A | SER139 |
A | SER157 |
A | ILE178 |
A | ARG262 |
A | TYR265 |
A | GLY301 |
A | ASP302 |
A | MET308 |
A | LEU309 |
A | PRO11 |
A | ALA310 |
A | HIS311 |
A | ALA313 |
A | TYR341 |
A | HOH2484 |
A | HOH2486 |
A | HOH2489 |
A | HOH2648 |
B | HIS434 |
A | GLY12 |
A | GLU31 |
A | LYS32 |
A | GLU33 |
A | GLY38 |
A | THR39 |
site_id | AC2 |
残基数 | 22 |
詳細 | BINDING SITE FOR RESIDUE NAD A 2483 |
鎖名 | 残基 |
A | TRP146 |
A | GLY174 |
A | GLY176 |
A | ILE178 |
A | GLU181 |
A | LEU196 |
A | GLU197 |
A | TYR198 |
A | MET199 |
A | GLY261 |
A | ARG262 |
A | MET308 |
A | LEU309 |
A | HOH2493 |
A | HOH2505 |
A | HOH2529 |
A | HOH2532 |
A | HOH2713 |
A | HOH2754 |
A | HOH2795 |
A | HOH2800 |
A | HOH2977 |
site_id | AC3 |
残基数 | 37 |
詳細 | BINDING SITE FOR RESIDUE FAD B 1482 |
鎖名 | 残基 |
A | HIS434 |
B | GLY8 |
B | GLY10 |
B | PRO11 |
B | GLY12 |
B | GLU31 |
B | LYS32 |
B | GLU33 |
B | GLY38 |
B | THR39 |
B | CYS40 |
B | ARG42 |
B | GLY44 |
B | CYS45 |
B | LYS49 |
B | GLY109 |
B | THR110 |
B | ALA111 |
B | ALA136 |
B | THR137 |
B | GLY138 |
B | SER139 |
B | ILE178 |
B | ARG262 |
B | TYR265 |
B | GLY301 |
B | ASP302 |
B | MET308 |
B | LEU309 |
B | ALA310 |
B | HIS311 |
B | TYR341 |
B | HOH1484 |
B | HOH1490 |
B | HOH1491 |
B | HOH1494 |
B | HOH1741 |
site_id | AC4 |
残基数 | 23 |
詳細 | BINDING SITE FOR RESIDUE NAD B 1483 |
鎖名 | 残基 |
B | GLY176 |
B | ILE178 |
B | GLU181 |
B | LEU196 |
B | GLU197 |
B | TYR198 |
B | MET199 |
B | ALA259 |
B | GLY261 |
B | MET308 |
B | LEU309 |
B | HOH1501 |
B | HOH1509 |
B | HOH1524 |
B | HOH1536 |
B | HOH1621 |
B | HOH1668 |
B | HOH1698 |
B | HOH1743 |
B | HOH1763 |
B | HOH1972 |
B | TRP146 |
B | GLY174 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00076 |
残基数 | 11 |
詳細 | PYRIDINE_REDOX_1 Pyridine nucleotide-disulphide oxidoreductases class-I active site. GGtCLrvGCIP |
鎖名 | 残基 | 詳細 |
A | GLY37-PRO47 |