1ZLA
X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core
GO（遺伝子オントロジー）由来の情報
| 鎖名 | GO（遺伝子オントロジー）id | 名前空間 | 内容 |
| A | 0000786 | cellular_component | nucleosome |
| A | 0003677 | molecular_function | DNA binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0005634 | cellular_component | nucleus |
| A | 0005654 | cellular_component | nucleoplasm |
| A | 0005694 | cellular_component | chromosome |
| A | 0030527 | molecular_function | structural constituent of chromatin |
| A | 0046982 | molecular_function | protein heterodimerization activity |
| B | 0000786 | cellular_component | nucleosome |
| B | 0003677 | molecular_function | DNA binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005694 | cellular_component | chromosome |
| B | 0006334 | biological_process | nucleosome assembly |
| B | 0030527 | molecular_function | structural constituent of chromatin |
| B | 0046982 | molecular_function | protein heterodimerization activity |
| C | 0000786 | cellular_component | nucleosome |
| C | 0003677 | molecular_function | DNA binding |
| C | 0005634 | cellular_component | nucleus |
| C | 0005694 | cellular_component | chromosome |
| C | 0030527 | molecular_function | structural constituent of chromatin |
| C | 0046982 | molecular_function | protein heterodimerization activity |
| D | 0000786 | cellular_component | nucleosome |
| D | 0003677 | molecular_function | DNA binding |
| D | 0005515 | molecular_function | protein binding |
| D | 0005634 | cellular_component | nucleus |
| D | 0005694 | cellular_component | chromosome |
| D | 0030527 | molecular_function | structural constituent of chromatin |
| D | 0046982 | molecular_function | protein heterodimerization activity |
| E | 0000786 | cellular_component | nucleosome |
| E | 0003677 | molecular_function | DNA binding |
| E | 0005515 | molecular_function | protein binding |
| E | 0005634 | cellular_component | nucleus |
| E | 0005654 | cellular_component | nucleoplasm |
| E | 0005694 | cellular_component | chromosome |
| E | 0030527 | molecular_function | structural constituent of chromatin |
| E | 0046982 | molecular_function | protein heterodimerization activity |
| F | 0000786 | cellular_component | nucleosome |
| F | 0003677 | molecular_function | DNA binding |
| F | 0005515 | molecular_function | protein binding |
| F | 0005634 | cellular_component | nucleus |
| F | 0005694 | cellular_component | chromosome |
| F | 0006334 | biological_process | nucleosome assembly |
| F | 0030527 | molecular_function | structural constituent of chromatin |
| F | 0046982 | molecular_function | protein heterodimerization activity |
| G | 0000786 | cellular_component | nucleosome |
| G | 0003677 | molecular_function | DNA binding |
| G | 0005634 | cellular_component | nucleus |
| G | 0005694 | cellular_component | chromosome |
| G | 0030527 | molecular_function | structural constituent of chromatin |
| G | 0046982 | molecular_function | protein heterodimerization activity |
| H | 0000786 | cellular_component | nucleosome |
| H | 0003677 | molecular_function | DNA binding |
| H | 0005515 | molecular_function | protein binding |
| H | 0005634 | cellular_component | nucleus |
| H | 0005694 | cellular_component | chromosome |
| H | 0030527 | molecular_function | structural constituent of chromatin |
| H | 0046982 | molecular_function | protein heterodimerization activity |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
| site_id | PS00047 |
| 残基数 | 5 |
| 詳細 | HISTONE_H4 Histone H4 signature. GAKRH |
| 鎖名 | 残基 | 詳細 |
| B | GLY14-HIS18 |
| site_id | PS00357 |
| 残基数 | 23 |
| 詳細 | HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG |
| 鎖名 | 残基 | 詳細 |
| D | ARG1289-GLY1311 |
| site_id | PS00046 |
| 残基数 | 7 |
| 詳細 | HISTONE_H2A Histone H2A signature. AGLqFPV |
| 鎖名 | 残基 | 詳細 |
| C | ALA821-VAL827 |
| site_id | PS00322 |
| 残基数 | 7 |
| 詳細 | HISTONE_H3_1 Histone H3 signature 1. KAPRKQL |
| 鎖名 | 残基 | 詳細 |
| A | LYS414-LEU420 |
| site_id | PS00959 |
| 残基数 | 9 |
| 詳細 | HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI |
| 鎖名 | 残基 | 詳細 |
| A | PRO466-ILE474 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
| site_id | SWS_FT_FI1 |
| 残基数 | 8 |
| 詳細 | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P0C1H4 |
| 鎖名 | 残基 | 詳細 |
| D | LYS1202 | |
| D | LYS1209 | |
| D | LYS1212 | |
| D | LYS1217 | |
| H | LYS1402 | |
| H | LYS1409 | |
| H | LYS1412 | |
| H | LYS1417 |
| site_id | SWS_FT_FI2 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Phosphoserine => ECO:0000269|PubMed:12757711 |
| 鎖名 | 残基 | 詳細 |
| D | SER1211 | |
| H | SER1411 |
| site_id | SWS_FT_FI3 |
| 残基数 | 2 |
| 詳細 | CARBOHYD: O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807 |
| 鎖名 | 残基 | 詳細 |
| D | SER1309 | |
| H | SER1509 | |
| G | LYS1009 | |
| G | LYS1095 |
| site_id | SWS_FT_FI4 |
| 残基数 | 4 |
| 詳細 | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4 |
| 鎖名 | 残基 | 詳細 |
| D | LYS1317 | |
| G | LYS1036 | |
| H | LYS1517 |
| site_id | SWS_FT_FI5 |
| 残基数 | 4 |
| 詳細 | MOD_RES: N6-(2-hydroxyisobutyryl)lysine => ECO:0000250|UniProtKB:P0C0S8 |
| 鎖名 | 残基 | 詳細 |
| C | LYS874 | |
| C | LYS875 | |
| G | LYS1074 | |
| G | LYS1075 | |
| F | GLY209 | |
| F | ARG217 | |
| F | ARG245 | |
| F | THR280 |
| site_id | SWS_FT_FI6 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N5-methylglutamine => ECO:0000250 |
| 鎖名 | 残基 | 詳細 |
| C | GLN904 | |
| G | GLN1104 | |
| F | GLY213 | |
| F | VAL221 |
| site_id | SWS_FT_FI7 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P0C0S8 |
| 鎖名 | 残基 | 詳細 |
| C | LYS918 | |
| G | LYS1118 | |
| F | PRO232 | |
| F | ARG292 |
| site_id | SWS_FT_FI8 |
| 残基数 | 8 |
| 詳細 | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250 |
| 鎖名 | 残基 | 詳細 |
| C | LYS813 | |
| E | SER610 | |
| C | LYS815 | |
| C | LYS919 | |
| G | LYS1013 | |
| G | LYS1015 | |
| G | LYS1119 |
| site_id | SWS_FT_FI9 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N6-lactoyllysine; alternate => ECO:0000250|UniProtKB:P84228 |
| 鎖名 | 残基 | 詳細 |
| A | LYS414 | |
| E | LYS614 | |
| F | GLU252 | |
| F | ALA289 |
| site_id | SWS_FT_FI10 |
| 残基数 | 10 |
| 詳細 | MOD_RES: N6-methyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | LYS418 | |
| E | LYS664 | |
| A | LYS423 | |
| A | LYS427 | |
| A | LYS436 | |
| A | LYS464 | |
| E | LYS618 | |
| E | LYS623 | |
| E | LYS627 | |
| E | LYS636 |
| site_id | SWS_FT_FI11 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Citrulline => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | ARG426 | |
| E | ARG626 |
| site_id | SWS_FT_FI12 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Phosphoserine; alternate; by AURKB, AURKC and RPS6KA5 => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | SER428 | |
| E | SER628 |
| site_id | SWS_FT_FI13 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N6-methyllysine => ECO:0000250|UniProtKB:P68431 |
| 鎖名 | 残基 | 詳細 |
| A | LYS437 | |
| E | LYS637 | |
| F | ARG292 |
| site_id | SWS_FT_FI14 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | TYR441 | |
| E | TYR641 |
| site_id | SWS_FT_FI15 |
| 残基数 | 4 |
| 詳細 | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228 |
| 鎖名 | 残基 | 詳細 |
| A | LYS456 | |
| A | LYS479 | |
| E | LYS656 | |
| E | LYS679 |
| site_id | SWS_FT_FI16 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | SER457 | |
| E | SER657 |
| site_id | SWS_FT_FI17 |
| 残基数 | 4 |
| 詳細 | MOD_RES: Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | THR480 | |
| A | THR507 | |
| E | THR680 | |
| E | THR707 |
| site_id | SWS_FT_FI18 |
| 残基数 | 2 |
| 詳細 | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P84243 |
| 鎖名 | 残基 | 詳細 |
| A | SER486 | |
| E | SER686 |
| site_id | SWS_FT_FI19 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | LYS515 | |
| E | LYS715 |
| site_id | SWS_FT_FI20 |
| 残基数 | 2 |
| 詳細 | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | LYS522 | |
| E | LYS722 |
| site_id | SWS_FT_FI21 |
| 残基数 | 2 |
| 詳細 | LIPID: S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3 |
| 鎖名 | 残基 | 詳細 |
| A | CYS510 | |
| E | CYS710 |
