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1YB5

Crystal structure of human Zeta-Crystallin with bound NADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003730molecular_functionmRNA 3'-UTR binding
A0003960molecular_functionNADPH:quinone reductase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0007601biological_processvisual perception
A0008270molecular_functionzinc ion binding
A0016491molecular_functionoxidoreductase activity
A0042178biological_processxenobiotic catabolic process
A0042802molecular_functionidentical protein binding
A0051289biological_processprotein homotetramerization
A0070062cellular_componentextracellular exosome
A0070402molecular_functionNADPH binding
A0070404molecular_functionNADH binding
B0003723molecular_functionRNA binding
B0003730molecular_functionmRNA 3'-UTR binding
B0003960molecular_functionNADPH:quinone reductase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0007601biological_processvisual perception
B0008270molecular_functionzinc ion binding
B0016491molecular_functionoxidoreductase activity
B0042178biological_processxenobiotic catabolic process
B0042802molecular_functionidentical protein binding
B0051289biological_processprotein homotetramerization
B0070062cellular_componentextracellular exosome
B0070402molecular_functionNADPH binding
B0070404molecular_functionNADH binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT B 811
ChainResidue
AVAL50
ATYR53
ATYR59
ANAP801
AHOH986
BARG257
BMET260
BHOH822

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACT A 812
ChainResidue
AMET260
AHOH824
BVAL50
BTYR53
BTYR59
BNAP802
BHOH950
AARG257

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 813
ChainResidue
AVAL80
AASP82
AHOH1154
BVAL80
BGLY81
BASP82

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 816
ChainResidue
AGLY156
AGLY159
AGLY160
AGLY162
ANAP801

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 817
ChainResidue
BGLY156
BGLY159
BGLY160
BGLY162
BNAP802

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 818
ChainResidue
ASER97
ATHR98
AALA109
AALA110
ATHR113
AHOH870

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL B 819
ChainResidue
BGLU51
BPRO69
BGLY70
BHOH864
BHOH924
BHOH1155

site_idAC8
Number of Residues38
DetailsBINDING SITE FOR RESIDUE NAP A 801
ChainResidue
APRO49
ATYR53
AILE131
ATHR135
AHIS155
AGLY156
ASER158
AGLY159
AGLY160
AVAL161
AALA180
AGLY181
AHIS200
ALEU225
AASN229
AVAL246
AARG249
AVAL269
ATHR270
ALEU271
AILE315
AGLY320
AALA321
ACL816
AHOH833
AHOH834
AHOH835
AHOH906
AHOH907
AHOH908
AHOH909
AHOH910
AHOH937
AHOH938
AHOH944
AHOH1073
BACT811
BHOH822

site_idAC9
Number of Residues42
DetailsBINDING SITE FOR RESIDUE NAP B 802
ChainResidue
BVAL246
BGLY247
BARG249
BVAL269
BTHR270
BLEU271
BILE315
BGLY320
BALA321
BCL817
BHOH825
BHOH867
BHOH898
BHOH899
BHOH900
BHOH902
BHOH903
BHOH905
BHOH906
BHOH938
BHOH944
BHOH949
BHOH950
BHOH1060
BHOH1063
AACT812
AHOH824
BPRO49
BTYR53
BILE131
BTHR135
BHIS155
BGLY156
BSER158
BGLY159
BGLY160
BVAL161
BALA180
BGLY181
BHIS200
BLEU225
BASN229

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 814
ChainResidue
AALA171
ATYR172
AILE292
ATRP294
AHOH962
AHOH963
BALA171
BTYR172
BTRP294

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 815
ChainResidue
AASP82
AASN83
ASER85
AHOH866
AHOH1152
BLYS34

site_idBC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 820
ChainResidue
ASER301
ATYR303
AASN314
ASER319
AGLY320
AMET325
AHOH828
AHOH840
AHOH1041
AHOH1131

site_idBC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL B 821
ChainResidue
BSER301
BTYR303
BASN314
BGLY318
BSER319
BGLY320
BMET325
BHOH834
BHOH897
BHOH1156

Functional Information from PROSITE/UniProt
site_idPS01162
Number of Residues22
DetailsQOR_ZETA_CRYSTAL Quinone oxidoreductase / zeta-crystallin signature. GEsvLvhgASGGvGlaacQiaR
ChainResidueDetails
AGLY149-ARG170

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|Ref.17
ChainResidueDetails
AVAL269
BTYR53
BSER158
BGLY181
BHIS200
BASN229
BVAL246
BVAL269
ATYR53
ASER158
AGLY181
AHIS200
AASN229
AVAL246

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:22814378
ChainResidueDetails
AALA2
BALA2

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS23
BLYS23

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:21406692
ChainResidueDetails
ASER248
BSER248

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:P47199
ChainResidueDetails
ALYS296
BLYS296

218500

数据于2024-04-17公开中

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