1PYI
CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000981 | molecular_function | DNA-binding transcription factor activity, RNA polymerase II-specific |
A | 0003700 | molecular_function | DNA-binding transcription factor activity |
A | 0006355 | biological_process | regulation of DNA-templated transcription |
A | 0008270 | molecular_function | zinc ion binding |
B | 0000981 | molecular_function | DNA-binding transcription factor activity, RNA polymerase II-specific |
B | 0003700 | molecular_function | DNA-binding transcription factor activity |
B | 0006355 | biological_process | regulation of DNA-templated transcription |
B | 0008270 | molecular_function | zinc ion binding |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE ZN A 21 |
鎖名 | 残基 |
A | ZN22 |
A | CYS34 |
A | CYS51 |
A | CYS54 |
A | CYS61 |
site_id | AC2 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE ZN A 22 |
鎖名 | 残基 |
A | CYS51 |
A | ZN21 |
A | CYS34 |
A | CYS37 |
A | CYS44 |
site_id | AC3 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE ZN B 321 |
鎖名 | 残基 |
B | CYS34 |
B | CYS51 |
B | CYS54 |
B | CYS61 |
B | ZN322 |
site_id | AC4 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE ZN B 322 |
鎖名 | 残基 |
B | CYS34 |
B | CYS37 |
B | CYS44 |
B | CYS51 |
B | ZN321 |
UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_id | PS00463 |
残基数 | 29 |
詳細 | ZN2_CY6_FUNGAL_1 Zn(2)-C6 fungal-type DNA-binding domain signature. ACkrCRlkKikCdqefps......CkrCaklevp..C |
鎖名 | 残基 | 詳細 |
A | ALA33-CYS61 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
site_id | SWS_FT_FI1 |
残基数 | 54 |
詳細 | DNA_BIND: Zn(2)-C6 fungal-type => ECO:0000255|PROSITE-ProRule:PRU00227 |
鎖名 | 残基 | 詳細 |
A | CYS34-CYS61 | |
B | CYS34-CYS61 |
site_id | SWS_FT_FI2 |
残基数 | 12 |
詳細 | BINDING: |
鎖名 | 残基 | 詳細 |
A | CYS34 | |
B | CYS51 | |
B | CYS54 | |
B | CYS61 | |
A | CYS37 | |
A | CYS44 | |
A | CYS51 | |
A | CYS54 | |
A | CYS61 | |
B | CYS34 | |
B | CYS37 | |
B | CYS44 |