1JXI
4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium complexed with 4-Amino-5-hydroxymethyl-2-methylpyrimidine
GO(遺伝子オントロジー)由来の情報
鎖名 | GO(遺伝子オントロジー)id | 名前空間 | 内容 |
A | 0000166 | molecular_function | nucleotide binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0008902 | molecular_function | hydroxymethylpyrimidine kinase activity |
A | 0008972 | molecular_function | phosphomethylpyrimidine kinase activity |
A | 0009228 | biological_process | thiamine biosynthetic process |
A | 0009229 | biological_process | thiamine diphosphate biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0016310 | biological_process | phosphorylation |
A | 0016740 | molecular_function | transferase activity |
B | 0000166 | molecular_function | nucleotide binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0008902 | molecular_function | hydroxymethylpyrimidine kinase activity |
B | 0008972 | molecular_function | phosphomethylpyrimidine kinase activity |
B | 0009228 | biological_process | thiamine biosynthetic process |
B | 0009229 | biological_process | thiamine diphosphate biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0016310 | biological_process | phosphorylation |
B | 0016740 | molecular_function | transferase activity |
PDBデータベースに由来する情報
site_id | AC1 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 A 2003 |
鎖名 | 残基 |
A | ASP105 |
A | THR106 |
A | GLU142 |
A | LYS176 |
A | GLY212 |
A | SO42005 |
site_id | AC2 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 B 2004 |
鎖名 | 残基 |
B | LYS176 |
B | GLY212 |
B | SO42006 |
B | ASP105 |
B | THR106 |
B | GLU142 |
site_id | AC3 |
残基数 | 5 |
詳細 | BINDING SITE FOR RESIDUE SO4 A 2005 |
鎖名 | 残基 |
A | THR208 |
A | HIS209 |
A | GLY210 |
A | HMH2001 |
A | SO42003 |
site_id | AC4 |
残基数 | 6 |
詳細 | BINDING SITE FOR RESIDUE SO4 B 2006 |
鎖名 | 残基 |
B | THR208 |
B | GLY210 |
B | THR211 |
B | GLY212 |
B | HMH2002 |
B | SO42004 |
site_id | AC5 |
残基数 | 7 |
詳細 | BINDING SITE FOR RESIDUE HMH A 2001 |
鎖名 | 残基 |
A | GLY11 |
A | THR12 |
A | GLU44 |
A | LYS111 |
A | CYS213 |
A | SO42005 |
A | HOH2023 |
site_id | AC6 |
残基数 | 7 |
詳細 | BINDING SITE FOR RESIDUE HMH B 2002 |
鎖名 | 残基 |
B | GLY11 |
B | THR12 |
B | GLU44 |
B | MET80 |
B | CYS213 |
B | SO42006 |
B | HOH2014 |
SwissProt/UniProtに記載されている蛋白質分子機能情報
CSAにおける酵素触媒機能の情報
site_id | MCSA1 |
残基数 | 6 |
詳細 | M-CSA 670 |
鎖名 | 残基 | 詳細 |
A | LYS176 | electrostatic stabiliser |
A | THR208 | metal ligand |
A | GLY210 | electrostatic stabiliser |
A | THR211 | electrostatic stabiliser |
A | GLY212 | electrostatic stabiliser |
A | CYS213 | electrostatic stabiliser |
site_id | MCSA2 |
残基数 | 6 |
詳細 | M-CSA 670 |
鎖名 | 残基 | 詳細 |
B | LYS176 | electrostatic stabiliser |
B | THR208 | metal ligand |
B | GLY210 | electrostatic stabiliser |
B | THR211 | electrostatic stabiliser |
B | GLY212 | electrostatic stabiliser |
B | CYS213 | electrostatic stabiliser |