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1JXI

4-Amino-5-hydroxymethyl-2-methylpyrimidine Phosphate Kinase from Salmonella typhimurium complexed with 4-Amino-5-hydroxymethyl-2-methylpyrimidine

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0008902molecular_functionhydroxymethylpyrimidine kinase activity
A0008972molecular_functionphosphomethylpyrimidine kinase activity
A0009228biological_processthiamine biosynthetic process
A0009229biological_processthiamine diphosphate biosynthetic process
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0008902molecular_functionhydroxymethylpyrimidine kinase activity
B0008972molecular_functionphosphomethylpyrimidine kinase activity
B0009228biological_processthiamine biosynthetic process
B0009229biological_processthiamine diphosphate biosynthetic process
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0016740molecular_functiontransferase activity
PDBデータベースに由来する情報
site_idAC1
残基数6
詳細BINDING SITE FOR RESIDUE SO4 A 2003
鎖名残基
AASP105
ATHR106
AGLU142
ALYS176
AGLY212
ASO42005

site_idAC2
残基数6
詳細BINDING SITE FOR RESIDUE SO4 B 2004
鎖名残基
BLYS176
BGLY212
BSO42006
BASP105
BTHR106
BGLU142

site_idAC3
残基数5
詳細BINDING SITE FOR RESIDUE SO4 A 2005
鎖名残基
ATHR208
AHIS209
AGLY210
AHMH2001
ASO42003

site_idAC4
残基数6
詳細BINDING SITE FOR RESIDUE SO4 B 2006
鎖名残基
BTHR208
BGLY210
BTHR211
BGLY212
BHMH2002
BSO42004

site_idAC5
残基数7
詳細BINDING SITE FOR RESIDUE HMH A 2001
鎖名残基
AGLY11
ATHR12
AGLU44
ALYS111
ACYS213
ASO42005
AHOH2023

site_idAC6
残基数7
詳細BINDING SITE FOR RESIDUE HMH B 2002
鎖名残基
BGLY11
BTHR12
BGLU44
BMET80
BCYS213
BSO42006
BHOH2014

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数2
詳細BINDING: BINDING => ECO:0000269|PubMed:11839308
鎖名残基詳細
AGLU44
BGLU44

CSAにおける酵素触媒機能の情報
site_idMCSA1
残基数6
詳細M-CSA 670
鎖名残基詳細
ALYS176electrostatic stabiliser
ATHR208metal ligand
AGLY210electrostatic stabiliser
ATHR211electrostatic stabiliser
AGLY212electrostatic stabiliser
ACYS213electrostatic stabiliser

site_idMCSA2
残基数6
詳細M-CSA 670
鎖名残基詳細
BLYS176electrostatic stabiliser
BTHR208metal ligand
BGLY210electrostatic stabiliser
BTHR211electrostatic stabiliser
BGLY212electrostatic stabiliser
BCYS213electrostatic stabiliser

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件を2024-04-17に公開中

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