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1HNZ

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH HYGROMYCIN B

GO(遺伝子オントロジー)由来の情報
鎖名GO(遺伝子オントロジー)id名前空間内容
B0003723molecular_functionRNA binding
B0003735molecular_functionstructural constituent of ribosome
B0005840cellular_componentribosome
B0006412biological_processtranslation
B0015935cellular_componentsmall ribosomal subunit
B0019843molecular_functionrRNA binding
B0022627cellular_componentcytosolic small ribosomal subunit
B1990904cellular_componentribonucleoprotein complex
C0003676molecular_functionnucleic acid binding
C0003723molecular_functionRNA binding
C0003729molecular_functionmRNA binding
C0003735molecular_functionstructural constituent of ribosome
C0005840cellular_componentribosome
C0006412biological_processtranslation
C0019843molecular_functionrRNA binding
C0022627cellular_componentcytosolic small ribosomal subunit
C1990904cellular_componentribonucleoprotein complex
D0003723molecular_functionRNA binding
D0003735molecular_functionstructural constituent of ribosome
D0005840cellular_componentribosome
D0006412biological_processtranslation
D0015935cellular_componentsmall ribosomal subunit
D0019843molecular_functionrRNA binding
D0042274biological_processribosomal small subunit biogenesis
D0046872molecular_functionmetal ion binding
D1990904cellular_componentribonucleoprotein complex
E0003723molecular_functionRNA binding
E0003735molecular_functionstructural constituent of ribosome
E0005737cellular_componentcytoplasm
E0005840cellular_componentribosome
E0006412biological_processtranslation
E0015935cellular_componentsmall ribosomal subunit
E0019843molecular_functionrRNA binding
E0043229cellular_componentintracellular organelle
E1990904cellular_componentribonucleoprotein complex
F0003723molecular_functionRNA binding
F0003735molecular_functionstructural constituent of ribosome
F0005737cellular_componentcytoplasm
F0005840cellular_componentribosome
F0006412biological_processtranslation
F0019843molecular_functionrRNA binding
F0022627cellular_componentcytosolic small ribosomal subunit
F0043229cellular_componentintracellular organelle
F0070181molecular_functionsmall ribosomal subunit rRNA binding
F1990904cellular_componentribonucleoprotein complex
G0000028biological_processribosomal small subunit assembly
G0000049molecular_functiontRNA binding
G0003723molecular_functionRNA binding
G0003729molecular_functionmRNA binding
G0003735molecular_functionstructural constituent of ribosome
G0005840cellular_componentribosome
G0006412biological_processtranslation
G0015935cellular_componentsmall ribosomal subunit
G0019843molecular_functionrRNA binding
G0022627cellular_componentcytosolic small ribosomal subunit
G1990904cellular_componentribonucleoprotein complex
H0003723molecular_functionRNA binding
H0003735molecular_functionstructural constituent of ribosome
H0005737cellular_componentcytoplasm
H0005840cellular_componentribosome
H0006412biological_processtranslation
H0019843molecular_functionrRNA binding
H0022627cellular_componentcytosolic small ribosomal subunit
H0043229cellular_componentintracellular organelle
H1990904cellular_componentribonucleoprotein complex
I0000049molecular_functiontRNA binding
I0003723molecular_functionRNA binding
I0003735molecular_functionstructural constituent of ribosome
I0005737cellular_componentcytoplasm
I0005840cellular_componentribosome
I0006412biological_processtranslation
I0019843molecular_functionrRNA binding
I0043229cellular_componentintracellular organelle
I1990904cellular_componentribonucleoprotein complex
J0000049molecular_functiontRNA binding
J0003723molecular_functionRNA binding
J0003735molecular_functionstructural constituent of ribosome
J0005840cellular_componentribosome
J0006412biological_processtranslation
J0015935cellular_componentsmall ribosomal subunit
J0019843molecular_functionrRNA binding
J1990904cellular_componentribonucleoprotein complex
K0003723molecular_functionRNA binding
K0003735molecular_functionstructural constituent of ribosome
K0005840cellular_componentribosome
K0006412biological_processtranslation
K0019843molecular_functionrRNA binding
K0022627cellular_componentcytosolic small ribosomal subunit
K1990904cellular_componentribonucleoprotein complex
L0000049molecular_functiontRNA binding
L0003723molecular_functionRNA binding
L0003735molecular_functionstructural constituent of ribosome
L0005840cellular_componentribosome
L0006412biological_processtranslation
L0015935cellular_componentsmall ribosomal subunit
L0019843molecular_functionrRNA binding
L1990904cellular_componentribonucleoprotein complex
M0000049molecular_functiontRNA binding
M0003676molecular_functionnucleic acid binding
M0003723molecular_functionRNA binding
M0003735molecular_functionstructural constituent of ribosome
M0005829cellular_componentcytosol
M0005840cellular_componentribosome
M0006412biological_processtranslation
M0015935cellular_componentsmall ribosomal subunit
M0019843molecular_functionrRNA binding
M1990904cellular_componentribonucleoprotein complex
N0003723molecular_functionRNA binding
N0003735molecular_functionstructural constituent of ribosome
N0005737cellular_componentcytoplasm
N0005840cellular_componentribosome
N0006412biological_processtranslation
N0008270molecular_functionzinc ion binding
N0019843molecular_functionrRNA binding
N0043229cellular_componentintracellular organelle
N0046872molecular_functionmetal ion binding
N1990904cellular_componentribonucleoprotein complex
O0003723molecular_functionRNA binding
O0003735molecular_functionstructural constituent of ribosome
O0005737cellular_componentcytoplasm
O0005840cellular_componentribosome
O0006412biological_processtranslation
O0019843molecular_functionrRNA binding
O0022627cellular_componentcytosolic small ribosomal subunit
O0043229cellular_componentintracellular organelle
O1990904cellular_componentribonucleoprotein complex
P0003735molecular_functionstructural constituent of ribosome
P0005737cellular_componentcytoplasm
P0005840cellular_componentribosome
P0006412biological_processtranslation
P0015935cellular_componentsmall ribosomal subunit
P0043229cellular_componentintracellular organelle
P1990904cellular_componentribonucleoprotein complex
Q0003723molecular_functionRNA binding
Q0003735molecular_functionstructural constituent of ribosome
Q0005840cellular_componentribosome
Q0006412biological_processtranslation
Q0019843molecular_functionrRNA binding
Q0022627cellular_componentcytosolic small ribosomal subunit
Q1990904cellular_componentribonucleoprotein complex
R0003723molecular_functionRNA binding
R0003735molecular_functionstructural constituent of ribosome
R0005840cellular_componentribosome
R0006412biological_processtranslation
R0019843molecular_functionrRNA binding
R0070181molecular_functionsmall ribosomal subunit rRNA binding
R1990904cellular_componentribonucleoprotein complex
S0000028biological_processribosomal small subunit assembly
S0003723molecular_functionRNA binding
S0003735molecular_functionstructural constituent of ribosome
S0005737cellular_componentcytoplasm
S0005840cellular_componentribosome
S0006412biological_processtranslation
S0015935cellular_componentsmall ribosomal subunit
S0019843molecular_functionrRNA binding
S0022627cellular_componentcytosolic small ribosomal subunit
S0043229cellular_componentintracellular organelle
S1990904cellular_componentribonucleoprotein complex
T0003723molecular_functionRNA binding
T0003735molecular_functionstructural constituent of ribosome
T0005829cellular_componentcytosol
T0005840cellular_componentribosome
T0006412biological_processtranslation
T0015935cellular_componentsmall ribosomal subunit
T0019843molecular_functionrRNA binding
T0070181molecular_functionsmall ribosomal subunit rRNA binding
T1990904cellular_componentribonucleoprotein complex
V0003723molecular_functionRNA binding
V0005840cellular_componentribosome
V0019843molecular_functionrRNA binding
V1990904cellular_componentribonucleoprotein complex
PDBデータベースに由来する情報
site_idAC1
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1545
鎖名残基
AC519
AA520

site_idAC2
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1546
鎖名残基
AG944
AG945

site_idAC3
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1547
鎖名残基
AG1224

site_idAC4
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1548
鎖名残基
AC23
AG11
AU12
AG21
AG22

site_idAC5
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1549
鎖名残基
AG664
AG741
AG742

site_idAC6
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1550
鎖名残基
AU14
AU17

site_idAC7
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1551
鎖名残基
AG377

site_idAC8
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1552
鎖名残基
AC749
AG750

site_idAC9
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1553
鎖名残基
AA766
AC811
AC812

site_idBC1
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1554
鎖名残基
AA768

site_idBC2
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1556
鎖名残基
AA780
AG800

site_idBC3
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1557
鎖名残基
AG576
AC578

site_idBC4
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1559
鎖名残基
AC508
AA509
AA510

site_idBC5
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1560
鎖名残基
AU560
AC562
AG566

site_idBC6
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1562
鎖名残基
AG21

site_idBC7
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1563
鎖名残基
AG595
AC596
AG597
AU598

site_idBC8
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1564
鎖名残基
AG858
AC868
AG869

site_idBC9
残基数1
詳細BINDING SITE FOR RESIDUE MG A 71
鎖名残基
AA860

site_idCC1
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1566
鎖名残基
AG885
AG886
AG887
AU911

site_idCC2
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1567
鎖名残基
AA937

site_idCC3
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1568
鎖名残基
AC934
AU1345

site_idCC4
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1569
鎖名残基
AC934
AC1344
AU1345

site_idCC5
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1570
鎖名残基
AG1343

site_idCC6
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1571
鎖名残基
AG1370

site_idCC7
残基数2
詳細BINDING SITE FOR RESIDUE MG A 86
鎖名残基
AG588
AG644

site_idCC8
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1574
鎖名残基
AA964
AU1199

site_idCC9
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1575
鎖名残基
AC979
AC980
AU981
AU982
AG1222

site_idDC1
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1576
鎖名残基
AA1360

site_idDC2
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1577
鎖名残基
AG1053
AC1054
AG1197

site_idDC3
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1578
鎖名残基
AC1054
AU1196
AG1197
AG1198

site_idDC4
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1579
鎖名残基
AG299
AG558

site_idDC5
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1580
鎖名残基
AG324

site_idDC6
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1581
鎖名残基
AA1396
AC1397
AA1398
AG1401
AC1402

site_idDC7
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1582
鎖名残基
AC1397
AA1398
AG1401
AC1402

site_idDC8
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1583
鎖名残基
AU516
AG517
AA532
AA533

site_idDC9
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1584
鎖名残基
AA572
AA573
AA574

site_idEC1
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1585
鎖名残基
AG898

site_idEC2
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1586
鎖名残基
AA1110

site_idEC3
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1587
鎖名残基
AA865
AC866
AG1079

site_idEC4
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1588
鎖名残基
AA1067
AG1068
AG1094
AG1387

site_idEC5
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1589
鎖名残基
AG1108
AU1095

site_idEC6
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1590
鎖名残基
AG286
AU287

site_idEC7
残基数6
詳細BINDING SITE FOR RESIDUE MG A 1592
鎖名残基
AU1510
AG1511
AU1512
AU1522
AG1523
AC1524

site_idEC8
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1593
鎖名残基
AA1499
AA1500
AG1508
AG1521
AMG1595

site_idEC9
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1594
鎖名残基
AA1499
AA1500
AG1504
AG1505

site_idFC1
残基数6
詳細BINDING SITE FOR RESIDUE MG A 1595
鎖名残基
AA1500
AG1504
AG1505
AA1507
AG1508
AMG1593

site_idFC2
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1596
鎖名残基
AC150

site_idFC3
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1597
鎖名残基
AA195

site_idFC4
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1598
鎖名残基
AU182
AG183

site_idFC5
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1599
鎖名残基
AA116
AG117
AG289

site_idFC6
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1600
鎖名残基
AC330
AC352

site_idFC7
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1601
鎖名残基
AC372
AU375
AG376
AU387

site_idFC8
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1603
鎖名残基
AA782
AA794

site_idFC9
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1604
鎖名残基
AG1053
AG1058
AC1059
AG1198
AU1199

site_idGC1
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1605
鎖名残基
AC1303
AG1304
AG1305
VASP5

site_idGC2
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1606
鎖名残基
AA563
AC564
AU565
AG567

site_idGC3
残基数3
詳細BINDING SITE FOR RESIDUE MG A 210
鎖名残基
AU603
AG604
AU605

site_idGC4
残基数3
詳細BINDING SITE FOR RESIDUE MG A 211
鎖名残基
AG584
AG585
AC756

site_idGC5
残基数2
詳細BINDING SITE FOR RESIDUE MG A 214
鎖名残基
AA547
AG548

site_idGC6
残基数5
詳細BINDING SITE FOR RESIDUE MG D 215
鎖名残基
DALA82
DSER83
DLYS85
DGLY87
DTHR89

site_idGC7
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1608
鎖名残基
AG410
AA431

site_idGC8
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1609
鎖名残基
AA535
AC536

site_idGC9
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1610
鎖名残基
AC504
AG505

site_idHC1
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1611
鎖名残基
AC518
AG529
LASN49

site_idHC2
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1612
鎖名残基
AC280
QSER39

site_idHC3
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1613
鎖名残基
AG251
AU252
AG266
AC267
AC268

site_idHC4
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1614
鎖名残基
AG238
AU239

site_idHC5
残基数1
詳細BINDING SITE FOR RESIDUE MG A 1615
鎖名残基
AG281

site_idHC6
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1616
鎖名残基
AC174
AC175

site_idHC7
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1617
鎖名残基
AA109
AA329
AG331

site_idHC8
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1618
鎖名残基
AA300
AC564

site_idHC9
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1619
鎖名残基
AG69
AG70
AG97
AU98

site_idIC1
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1620
鎖名残基
AG61
AU62
AG104
AG105
AC106

site_idIC2
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1621
鎖名残基
AC106
AG107
AA134
AMG1626

site_idIC3
残基数4
詳細BINDING SITE FOR RESIDUE MG A 1622
鎖名残基
AG324
AA325
AG326
TSER70

site_idIC4
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1623
鎖名残基
AA134
AC135

site_idIC5
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1624
鎖名残基
AA134
AA325

site_idIC6
残基数3
詳細BINDING SITE FOR RESIDUE MG A 1625
鎖名残基
AG107
AG108
AG326

site_idIC7
残基数6
詳細BINDING SITE FOR RESIDUE MG A 1626
鎖名残基
AG107
AG324
AA325
AG326
AMG1621
AMG1629

site_idIC8
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1627
鎖名残基
AA109
AG324
AG326
AMG1630
AMG1631

site_idIC9
残基数2
詳細BINDING SITE FOR RESIDUE MG A 1628
鎖名残基
AG107
AG108

site_idJC1
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1629
鎖名残基
AG108
AA109
AG324
AG326
AMG1626

site_idJC2
残基数6
詳細BINDING SITE FOR RESIDUE MG A 1630
鎖名残基
AA109
AG324
AG326
AA327
AMG1627
AMG1631

site_idJC3
残基数5
詳細BINDING SITE FOR RESIDUE MG A 1631
鎖名残基
AG324
AG326
AA327
AMG1627
AMG1630

site_idJC4
残基数4
詳細BINDING SITE FOR RESIDUE ZN N 190
鎖名残基
NCYS24
NCYS27
NCYS40
NCYS43

site_idJC5
残基数5
詳細BINDING SITE FOR RESIDUE ZN D 300
鎖名残基
DCYS9
DCYS12
DLEU19
DCYS26
DCYS31

site_idJC6
残基数10
詳細BINDING SITE FOR RESIDUE HYG A 1632
鎖名残基
AC1403
AC1404
AG1405
AG1494
AU1495
AC1496
AG1497
AU1498
XC5
XU6

UniProtにおけるモチーフ・データベースPROSITEからの機能情報
site_idPS00527
残基数23
詳細RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR
鎖名残基詳細
NARG23-ARG45

site_idPS00056
残基数13
詳細RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS
鎖名残基詳細
QGLY54-SER66

site_idPS00962
残基数12
詳細RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG
鎖名残基詳細
BVAL7-GLY18

site_idPS00054
残基数23
詳細RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN
鎖名残基詳細
KILE95-ASN117

site_idPS00585
残基数33
詳細RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV
鎖名残基詳細
EGLY23-VAL55

site_idPS00632
残基数25
詳細RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV
鎖名残基詳細
DLEU97-VAL121

site_idPS00323
残基数25
詳細RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT
鎖名残基詳細
SASN53-THR77

site_idPS00057
残基数24
詳細RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR
鎖名残基詳細
RARG32-ARG55

site_idPS00063
残基数16
詳細ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF
鎖名残基詳細
RLEU66-PHE81

site_idPS00548
残基数35
詳細RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG
鎖名残基詳細
CALA163-GLY197

site_idPS00362
残基数31
詳細RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY
鎖名残基詳細
OLEU39-TYR69

site_idPS00360
残基数19
詳細RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL
鎖名残基詳細
IGLY67-LEU85

site_idPS00052
残基数27
詳細RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA
鎖名残基詳細
GASP20-ALA46

site_idPS00053
残基数18
詳細RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR
鎖名残基詳細
HGLY108-ARG125

site_idPS01048
残基数10
詳細RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA
鎖名残基詳細
FGLY44-ALA53

site_idPS00055
残基数8
詳細RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
鎖名残基詳細
LLYS46-ARG53

site_idPS00361
残基数16
詳細RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT
鎖名残基詳細
JALA27-THR42

site_idPS00646
残基数14
詳細RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ
鎖名残基詳細
MARG88-GLN101

SwissProt/UniProtに記載されている蛋白質分子機能情報
site_idSWS_FT_FI1
残基数4
詳細BINDING: BINDING => ECO:0000269|PubMed:11866529
鎖名残基詳細
NCYS24
NCYS27
NCYS40
NCYS43

site_idSWS_FT_FI2
残基数1
詳細MOD_RES: 3-methylthioaspartic acid => ECO:0000269|PubMed:16287167, ECO:0000269|PubMed:25775268
鎖名残基詳細
LASP92

218500

件を2024-04-17に公開中

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