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6Q76

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-Pia with the HMA domain of Pikp-1 from rice (Oryza sativa)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9763
Spacegroup nameP 2 21 21
Unit cell lengths34.844, 53.444, 117.810
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.720 - 1.900
R-factor0.2053
Rwork0.203
R-free0.24510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2myw 5a6p
RMSD bond length0.012
RMSD bond angle1.501
Data reduction softwarexia2 (0.5.328)
Data scaling softwareAimless (0.7.3)
Phasing softwarePHASER (2.7.17)
Refinement softwareREFMAC (5.8.0230)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7201.940
High resolution limit [Å]1.9001.900
Rmerge0.057
Number of reflections181071151
<I/σ(I)>19.7
Completeness [%]100.0100
Redundancy12.613.3
CC(1/2)0.9900.810
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.12 M Alcohols (0.2 M 1,6-Hexanediol; 0.2 M 1-Butanol; 0.2 M 1,2-Propanediol; 0.2 M 2-Propanol; 0.2 M 1,4-Butanediol; 0.2 M 1,3-Propanediol), 0.1 M Buffer System 1 (1.0 M imidazole; MES monohydrate (acid), pH 6.5) and 50 % v/v Precipitant Mix 2 (40 % v/v Ethylene glycol; 20 % w/v PEG 8000)

218500

數據於2024-04-17公開中

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