6PET
Crystal structure of 8-hydroxychromene compound 30 bound to estrogen receptor alpha
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2016-06-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 |
格子定数 [Å] | 53.173, 58.746, 92.934 |
格子定数 [度] | 77.57, 74.40, 63.09 |
精密化法
残基 | 32.142 - 2.203 |
R因子 | 0.1763 |
Rwork | 0.173 |
R-free | 0.23230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in house model |
結合長の平均二乗偏差(RMSD) [Å] | 0.007 |
結合角の平均二乗偏差(RMSD) [度] | 0.995 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 35.000 | 35.000 | 2.240 |
分解能 [Å] (高) | 2.200 | 5.960 | 2.200 |
Rmerge_l_obs | 0.042 | 0.032 | 0.237 |
Rmeas | 0.059 | 0.045 | 0.335 |
Rpim | 0.042 | 0.032 | 0.237 |
Total number of observations | 53187 | ||
独立反射数 | 32797 | 2147 | 627 |
<I/σ(I)> | 10.2 | ||
完全性 [%] | 67.7 | 89 | 25.8 |
冗長性 | 1.6 | 1.9 | 1.2 |
CC(1/2) | 0.996 | 0.838 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION | 295 | 25-35% PEG 3,350 0.1 M Bis-Tris (pH 6.1-6.5) 150-300 mM MgCl2 |